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Items: 1 to 20 of 48

1.
Analysis of the chromatin landscape and RNA polymerase II binding at SIN3-regulated genes
Imad Soukar, Anindita Mitra, Lori A. Pile
Biol Open. 2023 Nov 15; 12(11): bio060026. Published online 2023 Nov 10. doi: 10.1242/bio.060026
PMCID:
PMC10651107
AbstractArticlePDF–8.9M
2.
Promoter proximal pausing and the control of gene expression
Jian Li, David S. Gilmour
Curr Opin Genet Dev. Author manuscript; available in PMC 2012 Sep 16.
Published in final edited form as: Curr Opin Genet Dev. 2011 Apr; 21(2): 231–235. Published online 2011 Feb 14. doi: 10.1016/j.gde.2011.01.010
PMCID:
PMC3443551
AbstractArticlePDF–928K
3.
The NELF pausing checkpoint mediates the functional divergence of Cdk9
Michael DeBerardine, Gregory T. Booth, Philip P. Versluis, John T. Lis
Nat Commun. 2023; 14: 2762. Published online 2023 May 13. doi: 10.1038/s41467-023-38359-y
PMCID:
PMC10182999
AbstractArticlePDF–2.5M
4.
NELF‐A controls Drosophila healthspan by regulating heat‐shock protein‐mediated cellular protection and heterochromatin maintenance
Zhen‐Kai Ngian, Wei‐Qi Lin, Chin‐Tong Ong
Aging Cell. 2021 May; 20(5): e13348. Published online 2021 Mar 31. doi: 10.1111/acel.13348
Correction in:
Aging Cell. 2022 Feb; 21(2): e13547.
PMCID:
PMC8135010
AbstractArticlePDF–2.4M
5.
Promoter Proximal Pausing Limits Tumorous Growth Induced by the Yki Transcription Factor in Drosophila
Sanket Nagarkar, Ruchi Wasnik, Pravallika Govada, Stephen Cohen, L. S. Shashidhara
Genetics. 2020 Sep; 216(1): 67–77. Published online 2020 Jul 30. doi: 10.1534/genetics.120.303419
PMCID:
PMC7463282
AbstractArticlePDF–2.1M
6.
Pleiohomeotic Interacts with the Core Transcription Elongation Factor Spt5 to Regulate Gene Expression in Drosophila
Robert Harvey, Eugene Schuster, Barbara H. Jennings
PLoS One. 2013; 8(7): e70184. Published online 2013 Jul 22. doi: 10.1371/journal.pone.0070184
PMCID:
PMC3718797
AbstractArticlePDF–4.6M
7.
Interactions between DSIF (DRB sensitivity inducing factor), NELF (negative elongation factor), and the Drosophila RNA polymerase II transcription elongation complex
Anamika Missra, David S. Gilmour
Proc Natl Acad Sci U S A. 2010 Jun 22; 107(25): 11301–11306. Published online 2010 Jun 4. doi: 10.1073/pnas.1000681107
PMCID:
PMC2895096
AbstractArticlePDF–1.6M
8.
RNA polymerase II pausing during development
Bjoern Gaertner, Julia Zeitlinger
Development. 2014 Mar 15; 141(6): 1179–1183. doi: 10.1242/dev.088492
PMCID:
PMC3943177
AbstractArticle
9.
GAGA factor, a positive regulator of global gene expression, modulates transcriptional pausing and organization of upstream nucleosomes
Shih-Ying Tsai, Yuh-Long Chang, Krishna B. S. Swamy, Ruei-Lin Chiang, Der-Hwa Huang
Epigenetics Chromatin. 2016; 9: 32. Published online 2016 Jul 27. doi: 10.1186/s13072-016-0082-4
PMCID:
PMC4962548
AbstractArticlePDF–8.9M
10.
NELF Potentiates Gene Transcription in the Drosophila Embryo
Xiaoling Wang, Saiyu Hang, Lisa Prazak, J. Peter Gergen
PLoS One. 2010; 5(7): e11498. Published online 2010 Jul 9. doi: 10.1371/journal.pone.0011498
PMCID:
PMC2901382
AbstractArticlePDF–2.0M
11.
The Drosophila CLAMP protein associates with diverse proteins on chromatin
Jennifer A. Urban, John M. Urban, Guray Kuzu, Erica N. Larschan
PLoS One. 2017; 12(12): e0189772. Published online 2017 Dec 27. doi: 10.1371/journal.pone.0189772
PMCID:
PMC5744976
AbstractArticlePDF–3.7M
12.
Natural Variation of ebony Gene Controlling Thoracic Pigmentation in Drosophila melanogaster
Aya Takahashi, Kuniaki Takahashi, Ryu Ueda, Toshiyuki Takano-Shimizu
Genetics. 2007 Oct; 177(2): 1233–1237. doi: 10.1534/genetics.107.075283
PMCID:
PMC2034628
AbstractArticlePDF–1.1M
13.
The RNA Polymerase II Core Promoter in Drosophila
Long Vo Ngoc, George A. Kassavetis, James T. Kadonaga
Genetics. 2019 May; 212(1): 13–24. Published online 2019 Mar 6. doi: 10.1534/genetics.119.302021
PMCID:
PMC6499525
AbstractArticlePDF–866K
14.
Molecular characterization of Drosophila NELF
Chwen-Huey Wu, Chanhyo Lee, Ruopeng Fan, Meghan J. Smith, Yuki Yamaguchi, Hiroshi Handa, David S. Gilmour
Nucleic Acids Res. 2005; 33(4): 1269–1279. Published online 2005 Mar 1. doi: 10.1093/nar/gki274
PMCID:
PMC552961
AbstractArticlePDF–618K
15.
Assessment of the roles of Spt5-nucleic acid contacts in promoter proximal pausing of RNA polymerase II
Roberta Dollinger, Eilene B. Deng, Josie Schultz, Sharon Wu, Haley R. Deorio, David S. Gilmour
J Biol Chem. 2023 Sep; 299(9): 105106. Published online 2023 Jul 28. doi: 10.1016/j.jbc.2023.105106
PMCID:
PMC10482750
AbstractArticlePDF–3.9M
16.
The negative elongation factor NELF promotes induced transcriptional response of Drosophila ecdysone-dependent genes
Marina Yu. Mazina, Elena V. Kovalenko, Nadezhda E. Vorobyeva
Sci Rep. 2021; 11: 172. Published online 2021 Jan 8. doi: 10.1038/s41598-020-80650-1
PMCID:
PMC7794308
AbstractArticlePDF–5.5M
17.
Proximity-dependent biotin labelling reveals CP190 as an EcR/Usp molecular partner
Marina Yu. Mazina, Rustam H. Ziganshin, Mikhail D. Magnitov, Anton K. Golovnin, Nadezhda E. Vorobyeva
Sci Rep. 2020; 10: 4793. Published online 2020 Mar 16. doi: 10.1038/s41598-020-61514-0
PMCID:
PMC7075897
AbstractArticlePDF–2.9M
18.
Cohesin Selectively Binds and Regulates Genes with Paused RNA Polymerase
Avery Fay, Ziva Misulovin, Jian Li, Cheri A. Schaaf, Maria Gause, David S. Gilmour, Dale Dorsett
Curr Biol. Author manuscript; available in PMC 2012 Oct 11.
Published in final edited form as: Curr Biol. 2011 Oct 11; 21(19): 1624–1634. Published online 2011 Sep 29. doi: 10.1016/j.cub.2011.08.036
PMCID:
PMC3193539
AbstractArticlePDF–2.3M
19.
Comparative interactome analysis of the PRE DNA-binding factors: purification of the Combgap-, Zeste-, Psq-, and Adf1-associated proteins
Darya Chetverina, Nadezhda E. Vorobyeva, Marina Yu. Mazina, Lika V. Fab, Dmitry Lomaev, Alexandra Golovnina, Vladic Mogila, Pavel Georgiev, Rustam H. Ziganshin, Maksim Erokhin
Cell Mol Life Sci. 2022 Jul; 79(7): 353. Published online 2022 Jun 9. doi: 10.1007/s00018-022-04383-2
PMCID:
PMC11072172
AbstractArticlePDF–6.3M
20.
Stalled Hox promoters as chromosomal boundaries
Vivek S. Chopra, Jessica Cande, Joung-Woo Hong, Michael Levine
Genes Dev. 2009 Jul 1; 23(13): 1505–1509. doi: 10.1101/gad.1807309
PMCID:
PMC2704471
AbstractArticlePDF–481K

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