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Items: 1 to 20 of 337

1.
A bistable autoregulatory module in the developing embryo commits cells to binary expression fates
Jiaxi Zhao, Mindy Liu Perkins, Matthew Norstad, Hernan G. Garcia
Curr Biol. Author manuscript; available in PMC 2024 Jul 24.
Published in final edited form as: Curr Biol. 2023 Jul 24; 33(14): 2851–2864.e11. Published online 2023 Jul 14. doi: 10.1016/j.cub.2023.06.060
PMCID:
PMC10428078
AbstractArticlePDF–3.0M
2.
Dynamic modulation of enhancer responsiveness by core promoter elements in living Drosophila embryos
Moe Yokoshi, Koji Kawasaki, Manuel Cambón, Takashi Fukaya
Nucleic Acids Res. 2022 Jan 11; 50(1): 92–107. Published online 2021 Dec 13. doi: 10.1093/nar/gkab1177
PMCID:
PMC8754644
AbstractArticlePDF–18M
3.
Prediction of cell position using single-cell transcriptomic data: an iterative procedure
Andrés M. Alonso, Alejandra Carrea, Luis Diambra
Version 2. F1000Res. 2019; 8: 1775. Published online 2020 Apr 9. doi: 10.12688/f1000research.20715.2
PMCID:
PMC7194340
AbstractArticlePDF–1.7M
4.
Microevolution of cis-Regulatory Elements: An Example from the Pair-Rule Segmentation Gene fushi tarazu in the Drosophila melanogaster Subgroup
Mohammed Bakkali
PLoS One. 2011; 6(11): e27376. Published online 2011 Nov 3. doi: 10.1371/journal.pone.0027376
PMCID:
PMC3207857
AbstractArticlePDF–971K
5.
Nuclear scaffold attachment stimulates, but is not essential for ARS activity in Saccharomyces cerevisiae: analysis of the Drosophila ftz SAR.
B Amati, L Pick, T Laroche, S M Gasser
EMBO J. 1990 Dec; 9(12): 4007–4016. doi: 10.1002/j.1460-2075.1990.tb07622.x
PMCID:
PMC552173
SummaryPage BrowsePDF–2.4M
6.
Stage-specific phosphorylation of the fushi tarazu protein during Drosophila development.
H M Krause, W J Gehring
EMBO J. 1989 Apr; 8(4): 1197–1204. doi: 10.1002/j.1460-2075.1989.tb03492.x
PMCID:
PMC400934
SummaryPage BrowsePDF–1.7M
7.
DNA-binding specificity of the fushi tarazu homeodomain.
B Florence, R Handrow, A Laughon
Mol Cell Biol. 1991 Jul; 11(7): 3613–3623. doi: 10.1128/mcb.11.7.3613
PMCID:
PMC361109
SummaryPage BrowsePDF–2.2M
8.
Identification of the binding sites for potential regulatory proteins in the upstream enhancer element of the Drosophila fushi tarazu gene.
S D Harrison, A A Travers
Nucleic Acids Res. 1988 Dec 23; 16(24): 11403–11416. doi: 10.1093/nar/16.24.11403
Correction in:
Nucleic Acids Res. 1989 Jan 25; 17(2): 830.
PMCID:
PMC339054
SummaryPage BrowsePDF–2.0M
9.
Sp1 activation of a TATA-less promoter requires a species-specific interaction involving transcription factor IID.
K H Emami, T W Burke, S T Smale
Nucleic Acids Res. 1998 Feb 1; 26(3): 839–846. doi: 10.1093/nar/26.3.839
PMCID:
PMC147315
SummaryPDF–569K
10.
Precisely timed regulation of enhancer activity defines the binary expression pattern of Fushi tarazu in the Drosophila embryo
Anthony Birnie, Audrey Plat, Cemil Korkmaz, Jacques P. Bothma
Curr Biol. 2023 Jul 24; 33(14): 2839–2850.e7. doi: 10.1016/j.cub.2023.04.005
PMCID:
PMC10373528
AbstractArticle
11.
Solution NMR Studies of the Ligand-Binding Domain of an Orphan Nuclear Receptor Reveals a Dynamic Helix in the Ligand-Binding Pocket
Nicolas Daffern, Zhonglei Chen, Yongbo Zhang, Leslie Pick, Ishwar Radhakrishnan
Biochemistry. Author manuscript; available in PMC 2019 Apr 3.
Published in final edited form as: Biochemistry. 2018 Apr 3; 57(13): 1977–1986. Published online 2018 Mar 22. doi: 10.1021/acs.biochem.8b00069
PMCID:
PMC5882526
AbstractArticlePDF–909K
12.
Hox genes, evo-devo, and the case of the ftz gene
Leslie Pick
Chromosoma. Author manuscript; available in PMC 2017 Jun 1.
Published in final edited form as: Chromosoma. 2016 Jun; 125(3): 535–551. Published online 2015 Nov 23. doi: 10.1007/s00412-015-0553-6
PMCID:
PMC4877300
AbstractArticlePDF–1.5M
13.
A regression system for estimation of errors introduced by confocal imaging into gene expression data in situ
Ekaterina Myasnikova, Svetlana Surkova, Grigory Stein, Andrei Pisarev, Maria Samsonova
BMC Bioinformatics. 2011; 12: 320. Published online 2011 Aug 4. doi: 10.1186/1471-2105-12-320
PMCID:
PMC3169536
AbstractArticlePDF–1.0M
14.
Surprising flexibility in a conserved Hox transcription factor over 550 million years of evolution
Alison Heffer, Jeffrey W. Shultz, Leslie Pick
Proc Natl Acad Sci U S A. 2010 Oct 19; 107(42): 18040–18045. Published online 2010 Jan 4. doi: 10.1073/pnas.1010746107
PMCID:
PMC2964257
AbstractArticlePDF–972K
15.
Vectors and parameters that enhance the efficacy of RNAi-mediated gene disruption in transgenic Drosophila
Benjamin Haley, Bryon Foys, Michael Levine
Proc Natl Acad Sci U S A. 2010 Jun 22; 107(25): 11435–11440. Published online 2010 Jun 4. doi: 10.1073/pnas.1006689107
PMCID:
PMC2895090
AbstractArticlePDF–1.4M
16.
Rapid detection and curation of conserved DNA via enhanced-BLAT and EvoPrinterHD analysis
Amarendra S Yavatkar, Yong Lin, Jermaine Ross, Yang Fann, Thomas Brody, Ward F Odenwald
BMC Genomics. 2008; 9: 106. Published online 2008 Feb 28. doi: 10.1186/1471-2164-9-106
PMCID:
PMC2268679
AbstractArticlePDF–1.0M
17.
Genetic Characterization of the Homeodomain-Independent Activity of the Drosophila Fushi Tarazu Gene Product
D. Hyduk, A. Percival-Smith
Genetics. 1996 Feb; 142(2): 481–492. doi: 10.1093/genetics/142.2.481
PMCID:
PMC1206982
SummaryPDF–6.7M
18.
Distamycin-induced inhibition of homeodomain-DNA complexes.
A Dorn, M Affolter, M Müller, W J Gehring, W Leupin
EMBO J. 1992 Jan; 11(1): 279–286. doi: 10.1002/j.1460-2075.1992.tb05050.x
PMCID:
PMC556448
SummaryPage BrowsePDF–2.0M
19.
The interaction with DNA of wild-type and mutant fushi tarazu homeodomains.
A Percival-Smith, M Müller, M Affolter, W J Gehring
EMBO J. 1990 Dec; 9(12): 3967–3974. doi: 10.1002/j.1460-2075.1990.tb07617.x
Correction in:
EMBO J. 1992 Jan; 11(1): 382.
PMCID:
PMC552168
SummaryPage BrowsePDF–1.8M
20.
Regulation of the segmentation gene fushi tarazu has been functionally conserved in Drosophila.
D Maier, A Preiss, J R Powell
EMBO J. 1990 Dec; 9(12): 3957–3966. doi: 10.1002/j.1460-2075.1990.tb07616.x
PMCID:
PMC552166
SummaryPage BrowsePDF–2.0M

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