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Select item 16918521.

Quantitative evolutionary genomics: differential gene expression and male reproductive success in Drosophila melanogaster.

Jenny M. Drnevich, Melissa M. Reedy, Elizabeth A. Ruedi, Sandra Rodriguez-Zas, Kimberly A. Hughes

Proc Biol Sci. 2004 Nov 7; 271(1554): 2267–2273. doi: 10.1098/rspb.2004.2880

PMCID:: PMC1691852

Summary PDF–138K

Select item 18005952.

An Ectopic Expression Screen Reveals the Protective and Toxic Effects of Drosophila Seminal Fluid Proteins

Jacob L. Mueller, Jennifer L. Page, Mariana F. Wolfner

Genetics. 2007 Feb; 175(2): 777–783. doi: 10.1534/genetics.106.065318

PMCID:: PMC1800595

Abstract Article PDF–237K

Select item 21349373.

Sustained Post-Mating Response in Drosophilamelanogaster Requires Multiple Seminal Fluid Proteins

K. Ravi Ram, Mariana F Wolfner

PLoS Genet. 2007 Dec; 3(12): e238. Prepublished online 2007 Nov 2. Published online 2007 Dec 14. doi: 10.1371/journal.pgen.0030238

PMCID:: PMC2134937

Abstract Article PDF–317K

Select item 37716484.

Differential gene expression related to Nora virus infection of Drosophila melanogaster

Ethan J. Cordes, Kellie D Licking-Murray, Kimberly A. Carlson

Virus Res. Author manuscript; available in PMC 2014 Aug 1.

Published in final edited form as: Virus Res. 2013 Aug; 175(2): 95–100. Published online 2013 Apr 18. doi: 10.1016/j.virusres.2013.03.021

PMCID:: PMC3771648

Abstract Article PDF–853K

Select item 47881085.

The Female Post-Mating Response Requires Genes Expressed in the Secondary Cells of the Male Accessory Gland in Drosophila melanogaster

Jessica L. Sitnik, Dragan Gligorov, Robert K. Maeda, François Karch, Mariana F. Wolfner

Genetics. 2016 Mar; 202(3): 1029–1041. Published online 2016 Jan 7. doi: 10.1534/genetics.115.181644

PMCID:: PMC4788108

Abstract Article PDF–4.3M

Select item 14565066.

Cross-Species Comparison of Drosophila Male Accessory Gland Protein Genes

J. L. Mueller, K. Ravi Ram, L. A. McGraw, M. C. Bloch Qazi, E. D. Siggia, A. G. Clark, C. F. Aquadro, M. F. Wolfner

Genetics. 2005 Sep; 171(1): 131–143. doi: 10.1534/genetics.105.043844

PMCID:: PMC1456506

Abstract Article PDF–152K

Select item 30401307.

Gepoclu: a software tool for identifying and analyzing gene positional clusters in large-scale gene expression analysis

Tania Dottorini, Nicola Senin, Giorgio Mazzoleni, Kalle Magnusson, Andrea Crisanti

BMC Bioinformatics. 2011; 12: 34. Published online 2011 Jan 26. doi: 10.1186/1471-2105-12-34

PMCID:: PMC3040130

Abstract Article PDF–478K

Select item 78261888.

Unraveling the Genetic Basis for the Rapid Diversification of Male Genitalia between Drosophila Species

Joanna F D Hagen, Cláudia C Mendes, Shamma R Booth, Javier Figueras Jimenez, Kentaro M Tanaka, Franziska A Franke, Luis Baudouin-Gonzalez, Amber M Ridgway, Saad Arif, Maria D S Nunes, Alistair P McGregor

Mol Biol Evol. 2021 Feb; 38(2): 437–448. Published online 2020 Sep 15. doi: 10.1093/molbev/msaa232

Correction in:: Mol Biol Evol. 2022 Oct; 39(10): msac207.

PMCID:: PMC7826188

Abstract Article PDF–648K

Select item 67580549.

Genome-Wide Expression Analysis in DrosophilaReveals Genes Controlling Circadian Behavior

M. Fernanda Ceriani, John B. Hogenesch, Marcelo Yanovsky, Satchidananda Panda, Martin Straume, Steve A. Kay

J Neurosci. 2002 Nov 1; 22(21): 9305–9319. doi: 10.1523/JNEUROSCI.22-21-09305.2002

PMCID:: PMC6758054

Abstract Article PDF–406K

Select item 482595510.

Sir2 Acts through Hepatocyte Nuclear Factor 4 to maintain insulin Signaling and Metabolic Homeostasis in Drosophila

Rebecca A. S. Palu, Carl S. Thummel

PLoS Genet. 2016 Apr; 12(4): e1005978. Published online 2016 Apr 8. doi: 10.1371/journal.pgen.1005978

PMCID:: PMC4825955

Abstract Article PDF–1.8M

Select item 404507311.

Microbiota-Induced Changes in Drosophila melanogaster Host Gene Expression and Gut Morphology

Nichole A. Broderick, Nicolas Buchon, Bruno Lemaitre

mBio. 2014 May-Jun; 5(3): e01117-14. Published online 2014 May 27. doi: 10.1128/mBio.01117-14

PMCID:: PMC4045073

Abstract Article PDF–2.2M

Select item 512686412.

Latitudinal clines in gene expression and cis-regulatory element variation in Drosophila melanogaster

Punita Juneja, Andrew Quinn, Francis M. Jiggins

BMC Genomics. 2016; 17: 981. Published online 2016 Nov 28. doi: 10.1186/s12864-016-3333-7

PMCID:: PMC5126864

Abstract Article PDF–1.1M

Select item 492804713.

Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome

Heath A. MacMillan, Jose M. Knee, Alice B. Dennis, Hiroko Udaka, Katie E. Marshall, Thomas J. S. Merritt, Brent J. Sinclair

Sci Rep. 2016; 6: 28999. Published online 2016 Jun 30. doi: 10.1038/srep28999

PMCID:: PMC4928047

Abstract Article PDF–3.1M

Select item 488965814.

mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster

Gildas Lepennetier, Francesco Catania

G3 (Bethesda) 2016 Jun; 6(6): 1617–1626. Published online 2016 Mar 28. doi: 10.1534/g3.116.029231

PMCID:: PMC4889658

Abstract Article PDF–1.5M

Select item 304044115.

A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionary-conserved pain gene

G. Gregory Neely, Andreas Hess, Michael Costigan, Alex C. Keene, Spyros Goulas, Michiel Langeslag, Robert S Griffin, Inna Belfer, Feng Dai, Shad Smith, Luda Diatchenko, Vaijayanti Gupta, Cui-ping Xia, Sabina Amann, Silke Kreitz, Cornelia Heindl-Erdmann, Susanne Wolz, Cindy V. Ly, Suchir Arora, Rinku Sarangi, Debasis Dan, Maria Novatchkova, Mark Rosenzweig, Dustin Gibson, Darwin Truong, Daniel Schramek, Tamara Zoranovic, Shane J. F. Cronin, Belinda Angjeli, Kay Brune, Georg Dietzl, William Maixner, Arabella Meixner, Winston Thomas, J. Andrew Pospisilik, Mattias Alenius, Michaela Kress, Sai Subramaniam, Paul A. Garrity, Hugo J. Bellen, Clifford J. Woolf, Josef M. Penninger

Cell. Author manuscript; available in PMC 2011 Nov 12.

Published in final edited form as: Cell. 2010 Nov 12; 143(4): 628–638. doi: 10.1016/j.cell.2010.09.047

PMCID:: PMC3040441

Abstract Article PDF–2.0M

Select item 353067716.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 570780517.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900218.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 435288719.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 282505320.

Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin

Roger A. Hoskins, Joseph W. Carlson, Cameron Kennedy, David Acevedo, Martha Evans-Holm, Erwin Frise, Kenneth H. Wan, Soo Park, Maria Mendez-Lago, Fabrizio Rossi, Alfredo Villasante, Patrizio Dimitri, Gary H. Karpen, Susan E. Celniker

Science. Author manuscript; available in PMC 2010 Feb 19.

Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1625–1628. doi: 10.1126/science.1139816

PMCID:: PMC2825053

Abstract Article PDF–858K

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