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Items: 1 to 20 of 70

1.
Defining NELF-E RNA Binding in HIV-1 and Promoter-Proximal Pause Regions
John M. Pagano, Hojoong Kwak, Colin T. Waters, Rebekka O. Sprouse, Brian S. White, Abdullah Ozer, Kylan Szeto, David Shalloway, Harold G. Craighead, John T. Lis
PLoS Genet. 2014 Jan; 10(1): e1004090. Published online 2014 Jan 16. doi: 10.1371/journal.pgen.1004090
PMCID:
PMC3894171
AbstractArticlePDF–3.6M
2.
Defining the Status of RNA Polymerase at Promoters
Leighton J. Core, Joshua J. Waterfall, Daniel A. Gilchrist, David C. Fargo, Hojoong Kwak, Karen Adelman, John T. Lis
Cell Rep. Author manuscript; available in PMC 2012 Oct 30.
Published in final edited form as: Cell Rep. 2012 Oct 25; 2(4): 1025–1035. Published online 2012 Oct 10. doi: 10.1016/j.celrep.2012.08.034
PMCID:
PMC3483431
AbstractArticlePDF–1.8M
3.
Promoter proximal pausing and the control of gene expression
Jian Li, David S. Gilmour
Curr Opin Genet Dev. Author manuscript; available in PMC 2012 Sep 16.
Published in final edited form as: Curr Opin Genet Dev. 2011 Apr; 21(2): 231–235. Published online 2011 Feb 14. doi: 10.1016/j.gde.2011.01.010
PMCID:
PMC3443551
AbstractArticlePDF–928K
4.
NELF‐A controls Drosophila healthspan by regulating heat‐shock protein‐mediated cellular protection and heterochromatin maintenance
Zhen‐Kai Ngian, Wei‐Qi Lin, Chin‐Tong Ong
Aging Cell. 2021 May; 20(5): e13348. Published online 2021 Mar 31. doi: 10.1111/acel.13348
Correction in:
Aging Cell. 2022 Feb; 21(2): e13547.
PMCID:
PMC8135010
AbstractArticlePDF–2.4M
5.
Chromatin Immunoprecipitation Indirect Peaks Highlight Long-Range Interactions of Insulator Proteins and Pol II Pausing
Jun Liang, Laurent Lacroix, Adrien Gamot, Suresh Cuddapah, Sophie Queille, Priscillia Lhoumaud, Pierre Lepetit, Pascal G.P. Martin, Jutta Vogelmann, Franck Court, Magali Hennion, Gaël Micas, Serge Urbach, Olivier Bouchez, Marcelo Nöllmann, Keji Zhao, Eldon Emberly, Olivier Cuvier
Mol Cell. Author manuscript; available in PMC 2015 Feb 20.
Published in final edited form as: Mol Cell. 2014 Feb 20; 53(4): 672–681. Published online 2014 Jan 30. doi: 10.1016/j.molcel.2013.12.029
PMCID:
PMC4198380
AbstractArticlePDF–1.2M
6.
Argonaute2 attenuates active transcription by limiting RNA Polymerase II elongation in Drosophila melanogaster
Ezequiel Nazer, Ryan K. Dale, Cameron Palmer, Elissa P. Lei
Sci Rep. 2018; 8: 15685. Published online 2018 Oct 24. doi: 10.1038/s41598-018-34115-1
PMCID:
PMC6200757
AbstractArticlePDF–1.9M
7.
Kinetic Competition between Elongation Rate and Binding of NELF Controls Promoter Proximal Pausing
Jian Li, Yingyun Liu, Ho Sung Rhee, Saikat Kumar B. Ghosh, Lu Bai, B. Franklin Pugh, David S. Gilmour
Mol Cell. Author manuscript; available in PMC 2014 Jun 6.
Published in final edited form as: Mol Cell. 2013 Jun 6; 50(5): 711–722. doi: 10.1016/j.molcel.2013.05.016
PMCID:
PMC3695833
AbstractArticlePDF–4.2M
8.
Immediate mediators of the inflammatory response are poised for gene activation through RNA polymerase II stalling
Karen Adelman, Megan A. Kennedy, Sergei Nechaev, Daniel A. Gilchrist, Ginger W. Muse, Yurii Chinenov, Inez Rogatsky
Proc Natl Acad Sci U S A. 2009 Oct 27; 106(43): 18207–18212. Published online 2009 Oct 9. doi: 10.1073/pnas.0910177106
PMCID:
PMC2775335
AbstractArticlePDF–1.1M
9.
A simplified miRNA-based gene silencing method for Drosophila melanogaster
Benjamin Haley, David Hendrix, Vinh Trang, Michael Levine
Dev Biol. Author manuscript; available in PMC 2009 Sep 15.
Published in final edited form as: Dev Biol. 2008 Sep 15; 321(2): 482–490. Published online 2008 Jun 19. doi: 10.1016/j.ydbio.2008.06.015
PMCID:
PMC2661819
AbstractArticlePDF–1.7M
10.
NELF and DSIF cause promoter proximal pausing on the hsp70 promoter in Drosophila
Chwen-Huey Wu, Yuki Yamaguchi, Lawrence R. Benjamin, Maria Horvat-Gordon, Jodi Washinsky, Espen Enerly, Jan Larsson, Andrew Lambertsson, Hiroshi Handa, David Gilmour
Genes Dev. 2003 Jun 1; 17(11): 1402–1414. doi: 10.1101/gad.1091403
PMCID:
PMC196072
AbstractArticlePDF–632K
11.
Promoter Proximal Pausing Limits Tumorous Growth Induced by the Yki Transcription Factor in Drosophila
Sanket Nagarkar, Ruchi Wasnik, Pravallika Govada, Stephen Cohen, L. S. Shashidhara
Genetics. 2020 Sep; 216(1): 67–77. Published online 2020 Jul 30. doi: 10.1534/genetics.120.303419
PMCID:
PMC7463282
AbstractArticlePDF–2.1M
12.
Pleiohomeotic Interacts with the Core Transcription Elongation Factor Spt5 to Regulate Gene Expression in Drosophila
Robert Harvey, Eugene Schuster, Barbara H. Jennings
PLoS One. 2013; 8(7): e70184. Published online 2013 Jul 22. doi: 10.1371/journal.pone.0070184
PMCID:
PMC3718797
AbstractArticlePDF–4.6M
13.
Interactions between DSIF (DRB sensitivity inducing factor), NELF (negative elongation factor), and the Drosophila RNA polymerase II transcription elongation complex
Anamika Missra, David S. Gilmour
Proc Natl Acad Sci U S A. 2010 Jun 22; 107(25): 11301–11306. Published online 2010 Jun 4. doi: 10.1073/pnas.1000681107
PMCID:
PMC2895096
AbstractArticlePDF–1.6M
14.
RNA polymerase II pausing during development
Bjoern Gaertner, Julia Zeitlinger
Development. 2014 Mar 15; 141(6): 1179–1183. doi: 10.1242/dev.088492
PMCID:
PMC3943177
AbstractArticle
15.
Collaborative repressive action of the antagonistic ETS transcription factors Pointed and Yan fine-tunes gene expression to confer robustness in Drosophila
Jemma L. Webber, Jie Zhang, Alex Massey, Nicelio Sanchez-Luege, Ilaria Rebay
Development. 2018 Jul 1; 145(13): dev165985. Published online 2018 Jul 2. doi: 10.1242/dev.165985
PMCID:
PMC6053666
AbstractArticle
16.
The chromatin remodeling and mRNA splicing functions of the Brahma (SWI/SNF) complex are mediated by the SNR1/SNF5 regulatory subunit
Claudia B. Zraly, Andrew K. Dingwall
Nucleic Acids Res. 2012 Jul; 40(13): 5975–5987. Published online 2012 Mar 28. doi: 10.1093/nar/gks288
PMCID:
PMC3401471
AbstractArticlePDF–4.5M
17.
GAGA factor, a positive regulator of global gene expression, modulates transcriptional pausing and organization of upstream nucleosomes
Shih-Ying Tsai, Yuh-Long Chang, Krishna B. S. Swamy, Ruei-Lin Chiang, Der-Hwa Huang
Epigenetics Chromatin. 2016; 9: 32. Published online 2016 Jul 27. doi: 10.1186/s13072-016-0082-4
PMCID:
PMC4962548
AbstractArticlePDF–8.9M
18.
Paused Pol II Coordinates Tissue Morphogenesis in the Drosophila Embryo
Mounia Lagha, Jacques P. Bothma, Emilia Esposito, Samuel Ng, Laura Stefanik, Chiahao Tsui, Jeffrey Johnston, Kai Chen, David S. Gilmour, Julia Zeitlinger, Michael S. Levine
Cell. Author manuscript; available in PMC 2014 Dec 5.
Published in final edited form as: Cell. 2013 May 23; 153(5): 976–987. doi: 10.1016/j.cell.2013.04.045
PMCID:
PMC4257494
AbstractArticlePDF–1.3M
19.
NELF Potentiates Gene Transcription in the Drosophila Embryo
Xiaoling Wang, Saiyu Hang, Lisa Prazak, J. Peter Gergen
PLoS One. 2010; 5(7): e11498. Published online 2010 Jul 9. doi: 10.1371/journal.pone.0011498
PMCID:
PMC2901382
AbstractArticlePDF–2.0M
20.
Transcription elongation controls cell fate specification in the Drosophila embryo
Xiaoling Wang, Chanhyo Lee, David S. Gilmour, J. Peter Gergen
Genes Dev. 2007 May 1; 21(9): 1031–1036. doi: 10.1101/gad.1521207
PMCID:
PMC1855229
AbstractArticlePDF–480K

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