PMC Links for Gene (Select 38817) - PMC

Quentin Szabo, Axelle Donjon, Ivana Jerković, Giorgio L. Papadopoulos, Thierry Cheutin, Boyan Bonev, Elphège P. Nora, Benoit G. Bruneau, Frédéric Bantignies, Giacomo Cavalli

Nat Genet. Author manuscript; available in PMC 2021 Apr 19.

Published in final edited form as: Nat Genet. 2020 Nov 1; 52(11): 1151–1157. Published online 2020 Oct 19. doi: 10.1038/s41588-020-00716-8

PMCID:: PMC7610512

Abstract Article PDF–5.8M

Select item 68927445.

CTCF variants in 39 individuals with a variable neurodevelopmental disorder broaden the mutational and clinical spectrum

Enrico D. H. Konrad, Niels Nardini, Almuth Caliebe, Inga Nagel, Dana Young, Gabriella Horvath, Stephanie L. Santoro, Christine Shuss, Alban Ziegler, Dominique Bonneau, Marlies Kempers, Rolph Pfundt, Eric Legius, Arjan Bouman, Kyra E. Stuurman, Katrin Õunap, Sander Pajusalu, Monica H. Wojcik, Georgia Vasileiou, Gwenaël Le Guyader, Hege M. Schnelle, Siren Berland, Evelien Zonneveld-Huijssoon, Simone Kersten, Aditi Gupta, Patrick R. Blackburn, Marissa S. Ellingson, Matthew J. Ferber, Radhika Dhamija, Eric W. Klee, Meriel McEntagart, Klaske D. Lichtenbelt, Amy Kenney, Samantha A. Vergano, Rami Abou Jamra, Konrad Platzer, Mary Ella Pierpont, Divya Khattar, Robert J. Hopkin, Richard J. Martin, Marjolijn C. J. Jongmans, Vivian Y. Chang, Julian A. Martinez-Agosto, Outi Kuismin, Mitja I. Kurki, Olli Pietiläinen, Aarno Palotie, Timothy J. Maarup, Diana S. Johnson, Katja Venborg Pedersen, Lone W. Laulund, Sally A. Lynch, Moira Blyth, Katrina Prescott, Natalie Canham, Rita Ibitoye, Eva H. Brilstra, Marwan Shinawi, Emily Fassi, DDD Study, Heinrich Sticht, Anne Gregor, Hilde Van Esch, Christiane Zweier

Genet Med. 2019; 21(12): 2723–2733. Published online 2019 Jun 26. doi: 10.1038/s41436-019-0585-z

PMCID:: PMC6892744

Abstract Article PDF–1.9M

Select item 64423796.

Chromatin architecture reorganization during neuronal cell differentiation in Drosophila genome

Keerthi T. Chathoth, Nicolae Radu Zabet

Genome Res. 2019 Apr; 29(4): 613–625. doi: 10.1101/gr.246710.118

PMCID:: PMC6442379

Abstract Article PDF–6.7M

Select item 39052707.

Ectopically tethered CP190 induces large-scale chromatin decondensation

Sajad H. Ahanger, Katharina Günther, Oliver Weth, Marek Bartkuhn, Ramesh R. Bhonde, Yogesh S. Shouche, Rainer Renkawitz

Sci Rep. 2014; 4: 3917. Published online 2014 Jan 29. doi: 10.1038/srep03917

PMCID:: PMC3905270

Abstract Article PDF–1.6M

Select item 26947388.

Drosophila CTCF is required for Fab-8 enhancer blocking activity in S2 cells

Dominic Ciavatta, Steve Rogers, Terry Magnuson

J Mol Biol. Author manuscript; available in PMC 2009 Jun 10.

Published in final edited form as: J Mol Biol. 2007 Oct 19; 373(2): 233–239. Published online 2007 Aug 14. doi: 10.1016/j.jmb.2007.07.065

PMCID:: PMC2694738

Abstract Article PDF–753K

Select item 109836699.

The N-terminal dimerization domains of human and Drosophila CTCF have similar functionality

Sofia Kamalyan, Olga Kyrchanova, Natalia Klimenko, Valentin Babosha, Yulia Vasileva, Elena Belova, Dariya Fursenko, Oksana Maksimenko, Pavel Georgiev

Epigenetics Chromatin. 2024; 17: 9. Published online 2024 Apr 1. doi: 10.1186/s13072-024-00534-w

PMCID:: PMC10983669

Abstract Article PDF–6.9M

Select item 961372110.

The Variable CTCF Site from Drosophila melanogasterUbx Gene is Redundant and Has no Insulator Activity

A. N. Ibragimov, O. V. Bylino, O. V. Kyrchanova, Y. V. Shidlovskii, R. White, P. Schedl, P. G. Georgiev

Dokl Biochem Biophys. 2022; 505(1): 173–175. Published online 2022 Aug 29. doi: 10.1134/S1607672922040044

Correction in:: Dokl Biochem Biophys. 2022; 507(1): 391.

PMCID:: PMC9613721

Abstract Article PDF–716K

Select item 764567911.

Molecular basis of CTCF binding polarity in genome folding

Elphège P. Nora, Laura Caccianini, Geoffrey Fudenberg, Kevin So, Vasumathi Kameswaran, Abigail Nagle, Alec Uebersohn, Bassam Hajj, Agnès Le Saux, Antoine Coulon, Leonid A. Mirny, Katherine S. Pollard, Maxime Dahan, Benoit G. Bruneau

Nat Commun. 2020; 11: 5612. Published online 2020 Nov 5. doi: 10.1038/s41467-020-19283-x

PMCID:: PMC7645679

Abstract Article PDF–2.4M

Select item 553693012.

Architectural protein Pita cooperates with dCTCF in organization of functional boundaries in Bithorax complex

Olga Kyrchanova, Nikolay Zolotarev, Vladic Mogila, Oksana Maksimenko, Paul Schedl, Pavel Georgiev

Development. 2017 Jul 15; 144(14): 2663–2672. doi: 10.1242/dev.149815

PMCID:: PMC5536930

Abstract Article

Select item 292209513.

The Drosophila homolog of the mammalian imprint regulator, CTCF, maintains the maternal genomic imprint in Drosophila melanogaster

William A MacDonald, Debashish Menon, Nicholas J Bartlett, G Elizabeth Sperry, Vanya Rasheva, Victoria Meller, Vett K Lloyd

BMC Biol. 2010; 8: 105. Published online 2010 Jul 30. doi: 10.1186/1741-7007-8-105

PMCID:: PMC2922095

Abstract Article PDF–1.3M

Select item 262123614.

Analysis of chromatin boundary activity in Drosophila cells

Mo Li, Vladimir E Belozerov, Haini N Cai

BMC Mol Biol. 2008; 9: 109. Published online 2008 Dec 11. doi: 10.1186/1471-2199-9-109

PMCID:: PMC2621236

Abstract Article PDF–1.3M

Select item 242311815.

Functional Interaction between the Fab-7 and Fab-8 Boundaries and the Upstream Promoter Region in the Drosophila Abd-B Gene

Olga Kyrchanova, Stepan Toshchakov, Yulia Podstreshnaya, Alexander Parshikov, Pavel Georgiev

Mol Cell Biol. 2008 Jun; 28(12): 4188–4195. Published online 2008 Apr 21. doi: 10.1128/MCB.00229-08

PMCID:: PMC2423118

Abstract Article PDF–628K

Select item 989767216.

CTCF, BEAF-32, and CP190 are not required for the establishment of TADs in early Drosophila embryos but have locus-specific roles

Gabriel R. Cavalheiro, Charles Girardot, Rebecca R. Viales, Tim Pollex, T. B. Ngoc Cao, Perrine Lacour, Songjie Feng, Adam Rabinowitz, Eileen E. M. Furlong

Sci Adv. 2023 Feb; 9(5): eade1085. Published online 2023 Feb 3. doi: 10.1126/sciadv.ade1085

PMCID:: PMC9897672

Abstract Article PDF–2.5M

Select item 891710117.

Fragments of the Fab-3 and Fab-4 Boundaries of the Drosophila melanogaster Bithorax Complex That Include CTCF Sites Are not Effective Insulators

O. V. Kyrchanova, N. Y. Postika, V. V. Sokolov, P. G. Georgiev

Dokl Biochem Biophys. 2022; 502(1): 21–24. Published online 2022 Mar 11. doi: 10.1134/S1607672922010069

PMCID:: PMC8917101

Abstract Article PDF–693K

Select item 788099718.

CTCF loss has limited effects on global genome architecture in Drosophila despite critical regulatory functions

Anjali Kaushal, Giriram Mohana, Julien Dorier, Isa Özdemir, Arina Omer, Pascal Cousin, Anastasiia Semenova, Michael Taschner, Oleksandr Dergai, Flavia Marzetta, Christian Iseli, Yossi Eliaz, David Weisz, Muhammad Saad Shamim, Nicolas Guex, Erez Lieberman Aiden, Maria Cristina Gambetta

Nat Commun. 2021; 12: 1011. Published online 2021 Feb 12. doi: 10.1038/s41467-021-21366-2

PMCID:: PMC7880997

Abstract Article PDF–6.2M

Select item 630624219.

Boundaries mediate long-distance interactions between enhancers and promoters in the Drosophila Bithorax complex

Nikolay Postika, Mario Metzler, Markus Affolter, Martin Müller, Paul Schedl, Pavel Georgiev, Olga Kyrchanova

PLoS Genet. 2018 Dec; 14(12): e1007702. Published online 2018 Dec 12. doi: 10.1371/journal.pgen.1007702

PMCID:: PMC6306242

Abstract Article PDF–3.4M

Select item 494890620.

Functional Dissection of the Blocking and Bypass Activities of the Fab-8 Boundary in the Drosophila Bithorax Complex

Olga Kyrchanova, Vladic Mogila, Daniel Wolle, Girish Deshpande, Alexander Parshikov, Fabienne Cléard, Francois Karch, Paul Schedl, Pavel Georgiev

PLoS Genet. 2016 Jul; 12(7): e1006188. Published online 2016 Jul 18. doi: 10.1371/journal.pgen.1006188

PMCID:: PMC4948906

Abstract Article PDF–19M

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