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Items: 16

1.
Nei-like DNA glycosylase 2 selectively antagonizes interferon-β expression upon respiratory syncytial virus infection
Lang Pan, Yaoyao Xue, Ke Wang, Xu Zheng, Azharul Islam, Nisha Tapryal, Anirban Chakraborty, Attila Bacsi, Xueqing Ba, Tapas K. Hazra, Istvan Boldogh
J Biol Chem. 2023 Aug; 299(8): 105028. Published online 2023 Jul 8. doi: 10.1016/j.jbc.2023.105028
PMCID:
PMC10403741
AbstractArticlePDF–4.9M
2.
NEIL1 and NEIL2 DNA glycosylases modulate anxiety and learning in a cooperative manner in mice
Gunn A. Hildrestrand, Veslemøy Rolseth, Nicolas Kunath, Rajikala Suganthan, Vidar Jensen, Anna M. Bugaj, Marion S. Fernandez-Berrocal, Sunniva B. Sikko, Susanne Vetlesen, Anna Kuśnierczyk, Ann-Karin Olsen, Kristine B. Gützkow, Alexander D. Rowe, Wei Wang, Olve Moldestad, Monica D. Syrstad, Geir Slupphaug, Lars Eide, Arne Klungland, Pål Sætrom, Luisa Luna, Jing Ye, Katja Scheffler, Magnar Bjørås
Commun Biol. 2021; 4: 1354. Published online 2021 Dec 2. doi: 10.1038/s42003-021-02864-x
PMCID:
PMC8639745
AbstractArticlePDF–4.6M
3.
Intrapulmonary administration of purified NEIL2 abrogates NF-κB–mediated inflammation
Nisha Tapryal, Shandy Shahabi, Anirban Chakraborty, Koa Hosoki, Maki Wakamiya, Gobinda Sarkar, Gulshan Sharma, Victor J. Cardenas, Istvan Boldogh, Sanjiv Sur, Gourisankar Ghosh, Tapas K. Hazra
J Biol Chem. 2021 Jan-Jun; 296: 100723. Published online 2021 Apr 28. doi: 10.1016/j.jbc.2021.100723
PMCID:
PMC8164026
AbstractArticlePDF–3.6M
4.
The DNA Glycosylase NEIL2 Suppresses Fusobacterium-Infection-Induced Inflammation and DNA Damage in Colonic Epithelial Cells
Ibrahim M. Sayed, Anirban Chakraborty, Amer Ali Abd El-Hafeez, Aditi Sharma, Ayse Z. Sahan, Wendy Jia Men Huang, Debashis Sahoo, Pradipta Ghosh, Tapas K. Hazra, Soumita Das
Cells. 2020 Sep; 9(9): 1980. Published online 2020 Aug 28. doi: 10.3390/cells9091980
PMCID:
PMC7565382
AbstractArticlePDF–3.9M
5.
NEIL1 and NEIL2 DNA glycosylases protect neural crest development against mitochondrial oxidative stress
Dandan Han, Lars Schomacher, Katrin M Schüle, Medhavi Mallick, Michael U Musheev, Emil Karaulanov, Laura Krebs, Annika von Seggern, Christof Niehrs
eLife. 2019; 8: e49044. Published online 2019 Sep 30. doi: 10.7554/eLife.49044
PMCID:
PMC6768664
AbstractArticlePDF–7.2M
6.
Neil2-null Mice Accumulate Oxidized DNA Bases in the Transcriptionally Active Sequences of the Genome and Are Susceptible to Innate Inflammation
Anirban Chakraborty, Maki Wakamiya, Tatiana Venkova-Canova, Raj K. Pandita, Leopoldo Aguilera-Aguirre, Altaf H. Sarker, Dharmendra Kumar Singh, Koa Hosoki, Thomas G. Wood, Gulshan Sharma, Victor Cardenas, Partha S. Sarkar, Sanjiv Sur, Tej K. Pandita, Istvan Boldogh, Tapas K. Hazra
J Biol Chem. 2015 Oct 9; 290(41): 24636–24648. Published online 2015 Aug 5. doi: 10.1074/jbc.M115.658146
PMCID:
PMC4598976
AbstractArticlePDF–1.6M
7.
No cancer predisposition or increased spontaneous mutation frequencies in NEIL DNA glycosylases-deficient mice
Veslemøy Rolseth, Luisa Luna, Ann Karin Olsen, Rajikala Suganthan, Katja Scheffler, Christine G. Neurauter, Ying Esbensen, Anna Kuśnierczyk, Gunn A. Hildrestrand, Anne Graupner, Jill M. Andersen, Geir Slupphaug, Arne Klungland, Hilde Nilsen, Magnar Bjørås
Sci Rep. 2017; 7: 4384. Published online 2017 Jun 29. doi: 10.1038/s41598-017-04472-4
PMCID:
PMC5491499
AbstractArticlePDF–1.9M
8.
Inactivation of NEIL2 DNA glycosylase by pyridoxal phosphate reveals a loop important for substrate binding
Inga R. Grin, Robert A. Rieger, Dmitry O. Zharkov
Biochem Biophys Res Commun. Author manuscript; available in PMC 2011 Mar 26.
Published in final edited form as: Biochem Biophys Res Commun. 2010 Mar 26; 394(1): 100–105. Published online 2010 Feb 20. doi: 10.1016/j.bbrc.2010.02.121
PMCID:
PMC2857644
AbstractArticlePDF–801K
9.
Kinetic, Thermodynamic, and Structural Characterizations of the Association between Nrf2-DLGex Degron and Keap1
Toshiaki Fukutomi, Kenji Takagi, Tsunehiro Mizushima, Noriaki Ohuchi, Masayuki Yamamoto
Mol Cell Biol. 2014 Mar; 34(5): 832–846. doi: 10.1128/MCB.01191-13
PMCID:
PMC4023822
AbstractArticlePDF–5.3M
10.
Keap1 Recruits Neh2 through Binding to ETGE and DLG Motifs: Characterization of the Two-Site Molecular Recognition Model
Kit I. Tong, Yasutake Katoh, Hideki Kusunoki, Ken Itoh, Toshiyuki Tanaka, Masayuki Yamamoto
Mol Cell Biol. 2006 Apr; 26(8): 2887–2900. doi: 10.1128/MCB.26.8.2887-2900.2006
PMCID:
PMC1446969
AbstractArticlePDF–1.0M
11.
Fance deficiency inhibits primordial germ cell proliferation associated with transcription–replication conflicts accumulate and DNA repair defects
Zhixian Zhou, Huan Yin, Suye Suye, Zhen Ren, Lei Yan, Liye Shi, Chun Fu
J Ovarian Res. 2023; 16: 160. Published online 2023 Aug 10. doi: 10.1186/s13048-023-01252-9
PMCID:
PMC10416540
AbstractArticlePDF–15M
12.
Genetic determinants of micronucleus formation in vivo
D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus
Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0
PMCID:
PMC10917660
AbstractArticlePDF–4.8M
13.
RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer
Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki
Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600
PMCID:
PMC310992
AbstractArticlePDF–3.4M
14.
Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes
Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki
Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100
PMCID:
PMC310980
AbstractArticlePDF–1.4M
15.
Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences
Mammalian Gene Collection (MGC) Program Team
Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899
PMCID:
PMC139241
AbstractArticlePDF–118K
16.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M

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