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Select item 74055491.

Acheron/Larp6 Is a Survival Protein That Protects Skeletal Muscle From Programmed Cell Death During Development

Ankur Sheel, Rong Shao, Christine Brown, Joanne Johnson, Alexandra Hamilton, Danhui Sun, Julia Oppenheimer, Wendy Smith, Pablo E. Visconti, Michele Markstein, Carol Bigelow, Lawrence M. Schwartz

Front Cell Dev Biol. 2020; 8: 622. Published online 2020 Jul 29. doi: 10.3389/fcell.2020.00622

PMCID:: PMC7405549

Abstract Article PDF–2.2M

Select item 53163752.

Achilles is a circadian clock-controlled gene that regulates immune function in Drosophila

Jiajia Li, Erin E Terry, Edith Fejer, Diana Gamba, Natalie Hartmann, Joseph Logsdon, Daniel Michalski, Lisa E Rois, Maria J Scuderi, Michael Kunst, Michael E Hughes

Brain Behav Immun. Author manuscript; available in PMC 2018 Mar 1.

Published in final edited form as: Brain Behav Immun. 2017 Mar; 61: 127–136. Published online 2016 Nov 14. doi: 10.1016/j.bbi.2016.11.012

PMCID:: PMC5316375

Abstract Article PDF–1.2M

Select item 74632883.

The Classic Lobe Eye Phenotype of Drosophila Is Caused by Transposon Insertion-Induced Misexpression of a Zinc-Finger Transcription Factor

Wonseok Son, Kwang-Wook Choi

Genetics. 2020 Sep; 216(1): 117–134. Published online 2020 Jul 7. doi: 10.1534/genetics.120.303486

PMCID:: PMC7463288

Abstract Article PDF–2.7M

Select item 64413884.

Aging and the Clock: Perspective from Flies to Humans

Aliza K. De Nobrega, Lisa C. Lyons

Eur J Neurosci. Author manuscript; available in PMC 2020 Mar 30.

Published before final editing as: Eur J Neurosci. 2018 Sep 30 : 10.1111/ejn.14176. doi: 10.1111/ejn.14176 [Epub ahead of print]

PMCID:: PMC6441388

Abstract Article PDF–515K

Select item 1231805.

Influence of the period-dependent circadian clock on diurnal, circadian, and aperiodic gene expression in Drosophilamelanogaster

Yiing Lin, Mei Han, Brian Shimada, Lin Wang, Therese M. Gibler, Aloka Amarakone, Tarif A. Awad, Gary D. Stormo, Russell N. Van Gelder, Paul H. Taghert

Proc Natl Acad Sci U S A. 2002 Jul 9; 99(14): 9562–9567. Published online 2002 Jun 27. doi: 10.1073/pnas.132269699

PMCID:: PMC123180

Abstract Article PDF–417K

Select item 29221336.

Surprising gene expression patterns within and between PDF-containing circadian neurons in Drosophila

Elzbieta Kula-Eversole, Emi Nagoshi, Yuhua Shang, Joseph Rodriguez, Ravi Allada, Michael Rosbash

Proc Natl Acad Sci U S A. 2010 Jul 27; 107(30): 13497–13502. Published online 2010 Jul 12. doi: 10.1073/pnas.1002081107

PMCID:: PMC2922133

Abstract Article PDF–601K

Select item 14134977.

Control of Daily Transcript Oscillations in Drosophila by Light and the Circadian Clock

Herman Wijnen, Felix Naef, Catharine Boothroyd, Adam Claridge-Chang, Michael W Young

PLoS Genet. 2006 Mar; 2(3): e39. Prepublished online 2006 Feb 3. Published online 2006 Mar 24. doi: 10.1371/journal.pgen.0020039

PMCID:: PMC1413497

Abstract Article PDF–740K

Select item 67580548.

Genome-Wide Expression Analysis in DrosophilaReveals Genes Controlling Circadian Behavior

M. Fernanda Ceriani, John B. Hogenesch, Marcelo Yanovsky, Satchidananda Panda, Martin Straume, Steve A. Kay

J Neurosci. 2002 Nov 1; 22(21): 9305–9319. doi: 10.1523/JNEUROSCI.22-21-09305.2002

PMCID:: PMC6758054

Abstract Article PDF–406K

Select item 45680259.

Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions

Albert J. Erives

Dev Genes Evol. 2015; 225(5): 259–273. Published online 2015 Jul 15. doi: 10.1007/s00427-015-0508-1

PMCID:: PMC4568025

Abstract Article PDF–2.8M

Select item 427152710.

Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution

Bryan A. Moyers, Jianzhi Zhang

Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286

Correction in:: Mol Biol Evol. 2016 Nov; 33(11): 3031.

PMCID:: PMC4271527

Abstract Article PDF–618K

Select item 304044111.

A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionary-conserved pain gene

G. Gregory Neely, Andreas Hess, Michael Costigan, Alex C. Keene, Spyros Goulas, Michiel Langeslag, Robert S Griffin, Inna Belfer, Feng Dai, Shad Smith, Luda Diatchenko, Vaijayanti Gupta, Cui-ping Xia, Sabina Amann, Silke Kreitz, Cornelia Heindl-Erdmann, Susanne Wolz, Cindy V. Ly, Suchir Arora, Rinku Sarangi, Debasis Dan, Maria Novatchkova, Mark Rosenzweig, Dustin Gibson, Darwin Truong, Daniel Schramek, Tamara Zoranovic, Shane J. F. Cronin, Belinda Angjeli, Kay Brune, Georg Dietzl, William Maixner, Arabella Meixner, Winston Thomas, J. Andrew Pospisilik, Mattias Alenius, Michaela Kress, Sai Subramaniam, Paul A. Garrity, Hugo J. Bellen, Clifford J. Woolf, Josef M. Penninger

Cell. Author manuscript; available in PMC 2011 Nov 12.

Published in final edited form as: Cell. 2010 Nov 12; 143(4): 628–638. doi: 10.1016/j.cell.2010.09.047

PMCID:: PMC3040441

Abstract Article PDF–2.0M

Select item 353067712.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 570780513.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900214.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 435288715.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

Select item 282505316.

Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin

Roger A. Hoskins, Joseph W. Carlson, Cameron Kennedy, David Acevedo, Martha Evans-Holm, Erwin Frise, Kenneth H. Wan, Soo Park, Maria Mendez-Lago, Fabrizio Rossi, Alfredo Villasante, Patrizio Dimitri, Gary H. Karpen, Susan E. Celniker

Science. Author manuscript; available in PMC 2010 Feb 19.

Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1625–1628. doi: 10.1126/science.1139816

PMCID:: PMC2825053

Abstract Article PDF–858K

Select item 281928017.

The Release 5.1 Annotation of Drosophila melanogaster Heterochromatin

Christopher D. Smith, ShengQiang Shu, Christopher J. Mungall, Gary H. Karpen

Science. Author manuscript; available in PMC 2010 Feb 10.

Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1586. doi: 10.1126/science.1139815

Correction in:: volume 317 on page 1325

PMCID:: PMC2819280

Abstract Article PDF–1.3M

Select item 118564818.

Combined Evidence Annotation of Transposable Elements in Genome Sequences

Hadi Quesneville, Casey M Bergman, Olivier Andrieu, Delphine Autard, Danielle Nouaud, Michael Ashburner, Dominique Anxolabehere

PLoS Comput Biol. 2005 Jul; 1(2): e22. Published online 2005 Jul 29. doi: 10.1371/journal.pcbi.0010022

PMCID:: PMC1185648

Abstract Article PDF–273K

Select item 15118719.

Heterochromatic sequences in a Drosophila whole-genome shotgun assembly

Roger A Hoskins, Christopher D Smith, Joseph W Carlson, A Bernardo Carvalho, Aaron Halpern, Joshua S Kaminker, Cameron Kennedy, Chris J Mungall, Beth A Sullivan, Granger G Sutton, Jiro C Yasuhara, Barbara T Wakimoto, Eugene W Myers, Susan E Celniker, Gerald M Rubin, Gary H Karpen

Genome Biol. 2002; 3(12): research0085.1–85.16. Published online 2002 Dec 31. doi: 10.1186/gb-2002-3-12-research0085

PMCID:: PMC151187

Abstract Article PDF–280K

Select item 15118620.

The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective

Joshua S Kaminker, Casey M Bergman, Brent Kronmiller, Joseph Carlson, Robert Svirskas, Sandeep Patel, Erwin Frise, David A Wheeler, Suzanna E Lewis, Gerald M Rubin, Michael Ashburner, Susan E Celniker

Genome Biol. 2002; 3(12): research0084.1–84.2. Published online 2002 Dec 23. doi: 10.1186/gb-2002-3-12-research0084

PMCID:: PMC151186

Abstract Article PDF–330K

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