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Items: 1 to 20 of 27

1.
Parallel RNAi screens across different cell lines identify generic and cell type-specific regulators of actin organization and cell morphology
Tao Liu, David Sims, Buzz Baum
Genome Biol. 2009; 10(3): R26. Published online 2009 Mar 5. doi: 10.1186/gb-2009-10-3-r26
PMCID:
PMC2690997
AbstractArticlePDF–3.3M
2.
Drosophila septin interacting protein 1 regulates neurogenesis in the early developing larval brain
Jia-Yi Wei, Sao-Yu Chu, Yu-Chien Huang, Pei-Chi Chung, Hung-Hsiang Yu
Sci Rep. 2022; 12: 292. Published online 2022 Jan 7. doi: 10.1038/s41598-021-04474-3
PMCID:
PMC8742078
AbstractArticlePDF–3.2M
3.
Using iterative cluster merging with improved gap statistics to perform online phenotype discovery in the context of high-throughput RNAi screens
Zheng Yin, Xiaobo Zhou, Chris Bakal, Fuhai Li, Youxian Sun, Norbert Perrimon, Stephen TC Wong
BMC Bioinformatics. 2008; 9: 264. Published online 2008 Jun 5. doi: 10.1186/1471-2105-9-264
PMCID:
PMC2443381
AbstractArticlePDF–3.2M
4.
Terminal Cytokinesis Events Uncovered after an RNAi Screen
Arnaud Echard, Gilles R. X. Hickson, Edan Foley, Patrick H. O’Farrell
Curr Biol. Author manuscript; available in PMC 2010 Jul 8.
Published in final edited form as: Curr Biol. 2004 Sep 21; 14(18): 1685–1693. doi: 10.1016/j.cub.2004.08.063
PMCID:
PMC2899696
AbstractArticlePDF–2.4M
5.
Computation-Based Discovery of Related Transcriptional Regulatory Modules and Motifs Using an Experimentally Validated Combinatorial Model
Marc S. Halfon, Yonatan Grad, George M. Church, Alan M. Michelson
Genome Res. 2002 Jul; 12(7): 1019–1028. doi: 10.1101/gr.228902
PMCID:
PMC186630
AbstractArticlePDF–591K
6.
Understanding microcephaly through the study of centrosome regulation in Drosophila neural stem cells
Beverly V. Robinson, Victor Faundez, Dorothy A. Lerit
Biochem Soc Trans. Author manuscript; available in PMC 2020 Nov 3.
Published in final edited form as: Biochem Soc Trans. 2020 Oct 30; 48(5): 2101–2115. doi: 10.1042/BST20200261
PMCID:
PMC7606523
AbstractArticlePDF–1.7M
7.
Identification of Genes That Promote or Antagonize Somatic Homolog Pairing Using a High-Throughput FISH–Based Screen
Eric F. Joyce, Benjamin R. Williams, Tiao Xie, C.-ting Wu
PLoS Genet. 2012 May; 8(5): e1002667. Published online 2012 May 10. doi: 10.1371/journal.pgen.1002667
PMCID:
PMC3349724
AbstractArticlePDF–1.7M
8.
A Screen for Morphological Complexity Identifies Regulators of Switch-like Transitions between Discrete Cell Shapes
Zheng Yin, Amine Sadok, Heba Sailem, Afshan McCarthy, Xiaofeng Xia, Fuhai Li, Mar Arias Garcia, Louise Evans, Alexis Barr, Norbert Perrimon, Christopher J Marshall, Stephen T.C. Wong, Chris Bakal
Nat Cell Biol. Author manuscript; available in PMC 2014 Jan 1.
Published in final edited form as: Nat Cell Biol. 2013 Jul; 15(7): 860–871. Published online 2013 Jun 9. doi: 10.1038/ncb2764
PMCID:
PMC3712499
AbstractArticlePDF–147M
9.
A functional genomic analysis of cell morphology using RNA interference
AA Kiger, B Baum, S Jones, MR Jones, A Coulson, C Echeverri, N Perrimon
J Biol. 2003; 2(4): 27. Published online 2003 Oct 1. doi: 10.1186/1475-4924-2-27
PMCID:
PMC333409
AbstractArticlePDF–1.6M
10.
CRISPR/Cas9 mediated genetic resource for unknown kinase and phosphatase genes in Drosophila
Menghua Wu, Xuedi Zhang, Wei Wei, Li Long, Sainan An, Guanjun Gao
Sci Rep. 2020; 10: 7383. Published online 2020 Apr 30. doi: 10.1038/s41598-020-64253-4
PMCID:
PMC7193564
AbstractArticlePDF–1.8M
11.
Identification of Drosophila Mutants Affecting Defense to an Entomopathogenic Fungus
Hsiao-Ling Lu, Jonathan B. Wang, Markus A. Brown, Christopher Euerle, Raymond J. St. Leger
Sci Rep. 2015; 5: 12350. Published online 2015 Jul 23. doi: 10.1038/srep12350
PMCID:
PMC4511952
AbstractArticlePDF–1.5M
12.
A Drosophila protein-interaction map centered on cell-cycle regulators
Clement A Stanyon, Guozhen Liu, Bernardo A Mangiola, Nishi Patel, Loic Giot, Bing Kuang, Huamei Zhang, Jinhui Zhong, Russell L Finley, Jr
Genome Biol. 2004; 5(12): R96. Published online 2004 Nov 26. doi: 10.1186/gb-2004-5-12-r96
PMCID:
PMC545799
AbstractArticlePDF–1.2M
13.
Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution
Bryan A. Moyers, Jianzhi Zhang
Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286
Correction in:
Mol Biol Evol. 2016 Nov; 33(11): 3031.
PMCID:
PMC4271527
AbstractArticlePDF–618K
14.
High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression
Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras
Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112
PMCID:
PMC3530677
AbstractArticlePDF–1.5M
15.
Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species
Piero Sanfilippo, Jiayu Wen, Eric C. Lai
Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0
PMCID:
PMC5707805
AbstractArticlePDF–3.2M
16.
Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster
Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira
RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117
PMCID:
PMC5689002
AbstractArticlePDF–4.0M
17.
The Release 6 reference sequence of the Drosophila melanogaster genome
Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker
Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114
PMCID:
PMC4352887
AbstractArticlePDF–1022K
18.
Sequence Finishing and Mapping of Drosophila melanogaster Heterochromatin
Roger A. Hoskins, Joseph W. Carlson, Cameron Kennedy, David Acevedo, Martha Evans-Holm, Erwin Frise, Kenneth H. Wan, Soo Park, Maria Mendez-Lago, Fabrizio Rossi, Alfredo Villasante, Patrizio Dimitri, Gary H. Karpen, Susan E. Celniker
Science. Author manuscript; available in PMC 2010 Feb 19.
Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1625–1628. doi: 10.1126/science.1139816
PMCID:
PMC2825053
AbstractArticlePDF–858K
19.
The Release 5.1 Annotation of Drosophila melanogaster Heterochromatin
Christopher D. Smith, ShengQiang Shu, Christopher J. Mungall, Gary H. Karpen
Science. Author manuscript; available in PMC 2010 Feb 10.
Published in final edited form as: Science. 2007 Jun 15; 316(5831): 1586. doi: 10.1126/science.1139815
Correction in:
volume 317 on page 1325
PMCID:
PMC2819280
AbstractArticlePDF–1.3M
20.
Combined Evidence Annotation of Transposable Elements in Genome Sequences
Hadi Quesneville, Casey M Bergman, Olivier Andrieu, Delphine Autard, Danielle Nouaud, Michael Ashburner, Dominique Anxolabehere
PLoS Comput Biol. 2005 Jul; 1(2): e22. Published online 2005 Jul 29. doi: 10.1371/journal.pcbi.0010022
PMCID:
PMC1185648
AbstractArticlePDF–273K

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