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Select item 1230051.

Preferential cleavage of plasmid-based R-loops and D-loops by Drosophila topoisomerase IIIβ

Tina Wilson-Sali, Tao-shih Hsieh

Proc Natl Acad Sci U S A. 2002 Jun 11; 99(12): 7974–7979. Published online 2002 Jun 4. doi: 10.1073/pnas.122007999

PMCID:: PMC123005

Abstract Article PDF–237K

Select item 53895372.

Topoisomerase 3β is the major topoisomerase for mRNAs and linked to neurodevelopment and mental dysfunction

Muzammil Ahmad, Weiping Shen, Wen Li, Yutong Xue, Sige Zou, Dongyi Xu, Weidong Wang

Nucleic Acids Res. 2017 Mar 17; 45(5): 2704–2713. Published online 2016 Dec 30. doi: 10.1093/nar/gkw1293

PMCID:: PMC5389537

Abstract Article PDF–3.2M

Select item 50358553.

DNA and RNA topoisomerase activities of Top3β are promoted by mediator protein Tudor domain-containing protein 3

Grace Ee-Lu Siaw, I-Fen Liu, Po-Yen Lin, Michael D. Been, Tao-shih Hsieh

Proc Natl Acad Sci U S A. 2016 Sep 20; 113(38): E5544–E5551. Published online 2016 Aug 31. doi: 10.1073/pnas.1605517113

PMCID:: PMC5035855

Abstract Article PDF–1.4M

Select item 20554244.

A new Drosophila gene wh (wuho) with WD40 repeats is essential for spermatogenesis and has maximal expression in hub cells

Jianhong Wu, Joshua H. Hou, Tao-shih Hsieh

Dev Biol. Author manuscript; available in PMC 2007 Nov 2.

Published in final edited form as: Dev Biol. 2006 Aug 1; 296(1): 219–230. Published online 2006 May 3. doi: 10.1016/j.ydbio.2006.04.459

PMCID:: PMC2055424

Abstract Article PDF–2.0M

Select item 88441175.

Proper control of R‐loop homeostasis is required for maintenance of gene expression and neuronal function during aging

Juan Jauregui‐Lozano, Spencer Escobedo, Alyssa Easton, Nadia A. Lanman, Vikki M. Weake, Hana Hall

Aging Cell. 2022 Feb; 21(2): e13554. Published online 2022 Jan 20. doi: 10.1111/acel.13554

PMCID:: PMC8844117

Abstract Article PDF–1.9M

Select item 31660806.

High-Content Chemical and RNAi Screens for Suppressors of Neurotoxicity in a Huntington's Disease Model

Joost Schulte, Katharine J. Sepp, Chaohong Wu, Pengyu Hong, J. Troy Littleton

PLoS One. 2011; 6(8): e23841. Published online 2011 Aug 31. doi: 10.1371/journal.pone.0023841

PMCID:: PMC3166080

Abstract Article PDF–1.6M

Select item 38533477.

Top3ß is an RNA topoisomerase that works with Fragile X syndrome protein to promote synapse formation

Dongyi Xu, Weiping Shen, Rong Guo, Yutong Xue, Wei Peng, Jian Sima, Jay Yang, Alexei Sharov, Subramanya Srikantan, Jiandong Yang, David Fox, 3rd, Yong Qian, Jennifer L. Martindale, Yulan Piao, James Machamer, Samit R. Joshi, Subhasis Mohanty, Albert C. Shaw, Thomas E. Lloyd, Grant W. Brown, Minoru S.H. Ko, Myriam Gorospe, Sige Zou, Weidong Wang

Nat Neurosci. Author manuscript; available in PMC 2014 Mar 1.

Published in final edited form as: Nat Neurosci. 2013 Sep; 16(9): 1238–1247. Published online 2013 Aug 4. doi: 10.1038/nn.3479

PMCID:: PMC3853347

Abstract Article PDF–1.7M

Select item 15440528.

Topoisomerase IIIα and Bloom’s helicase can resolve a mobile double Holliday junction substrate through convergent branch migration

Jody L. Plank, Jianhong Wu, Tao-shih Hsieh

Proc Natl Acad Sci U S A. 2006 Jul 25; 103(30): 11118–11123. Published online 2006 Jul 18. doi: 10.1073/pnas.0604873103

PMCID:: PMC1544052

Abstract Article PDF–889K

Select item 62519279.

Topoisomerase 3β interacts with RNAi machinery to promote heterochromatin formation and transcriptional silencing in Drosophila

Seung Kyu Lee, Yutong Xue, Weiping Shen, Yongqing Zhang, Yuyoung Joo, Muzammil Ahmad, Madoka Chinen, Yi Ding, Wai Lim Ku, Supriyo De, Elin Lehrmann, Kevin G. Becker, Elissa P. Lei, Keji Zhao, Sige Zou, Alexei Sharov, Weidong Wang

Nat Commun. 2018; 9: 4946. Published online 2018 Nov 23. doi: 10.1038/s41467-018-07101-4

PMCID:: PMC6251927

Abstract Article PDF–5.8M

Select item 965309410.

Mitochondrial DNA maintenance in Drosophila melanogaster

Ana P.C. Rodrigues, Audrey C. Novaes, Grzegorz L. Ciesielski, Marcos T. Oliveira

Biosci Rep. 2022 Nov 30; 42(11): BSR20211693. Published online 2022 Nov 10. doi: 10.1042/BSR20211693

PMCID:: PMC9653094

Abstract Article PDF–1.3M

Select item 282481611.

Laser Microdissection of Sensory Organ Precursor Cells of Drosophila Microchaetes

Eulalie Buffin, Michel Gho

PLoS One. 2010; 5(2): e9285. Published online 2010 Feb 19. doi: 10.1371/journal.pone.0009285

PMCID:: PMC2824816

Abstract Article PDF–286K

Select item 229000212.

Vector and parameters for targeted transgenic RNA interference in Drosophila melanogaster

Jian-Quan Ni, Michele Markstein, Richard Binari, Barret Pfeiffer, Lu-Ping Liu, Christians Villalta, Matthew Booker, Lizabeth Perkins, Norbert Perrimon

Nat Methods. Author manuscript; available in PMC 2008 Apr 8.

Published in final edited form as: Nat Methods. 2008 Jan; 5(1): 49–51. Published online 2007 Dec 16. doi: 10.1038/nmeth1146

PMCID:: PMC2290002

Abstract Article PDF–896K

Select item 293956613.

Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs

Enrique Blanco, Marina Ruiz-Romero, Sergi Beltran, Manel Bosch, Adrià Punset, Florenci Serras, Montserrat Corominas

BMC Dev Biol. 2010; 10: 94. Published online 2010 Sep 2. doi: 10.1186/1471-213X-10-94

PMCID:: PMC2939566

Abstract Article PDF–5.1M

Select item 331904814.

A Protein Complex Network of Drosophila melanogaster

K. G. Guruharsha, J. -F. Rual, B. Zhai, J. Mintseris, P. Vaidya, N. Vaidya, C. Beekman, C. Wong, D. Y. Rhee, O. Cenaj, E. McKillip, S. Shah, M. Stapleton, K. H. Wan, C. Yu, B. Parsa, J. W. Carlson, X. Chen, B. Kapadia, K. VijayRaghavan, S. P. Gygi, S. E. Celniker, R. A. Obar, S. Artavanis-Tsakonas

Cell. Author manuscript; available in PMC 2012 Oct 28.

Published in final edited form as: Cell. 2011 Oct 28; 147(3): 690–703. doi: 10.1016/j.cell.2011.08.047

PMCID:: PMC3319048

Abstract Article PDF–3.2M

Select item 473800515.

Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes

Sadhna Phanse, Cuihong Wan, Blake Borgeson, Fan Tu, Kevin Drew, Greg Clark, Xuejian Xiong, Olga Kagan, Julian Kwan, Alexandr Bezginov, Kyle Chessman, Swati Pal, Graham Cromar, Ophelia Papoulas, Zuyao Ni, Daniel R. Boutz, Snejana Stoilova, Pierre C. Havugimana, Xinghua Guo, Ramy H. Malty, Mihail Sarov, Jack Greenblatt, Mohan Babu, W. Brent Derry, Elisabeth R. Tillier, John B. Wallingford, John Parkinson, Edward M. Marcotte, Andrew Emili

Data Brief. 2016 Mar; 6: 715–721. Published online 2015 Dec 12. doi: 10.1016/j.dib.2015.11.062

PMCID:: PMC4738005

Abstract Article PDF–205K

Select item 427152716.

Phylostratigraphic Bias Creates Spurious Patterns of Genome Evolution

Bryan A. Moyers, Jianzhi Zhang

Mol Biol Evol. 2015 Jan 1; 32(1): 258–267. Published online 2014 Oct 13. doi: 10.1093/molbev/msu286

Correction in:: Mol Biol Evol. 2016 Nov; 33(11): 3031.

PMCID:: PMC4271527

Abstract Article PDF–618K

Select item 285522117.

A global in vivo Drosophila RNAi screen identifies NOT3 as a conserved regulator of heart function

G. Gregory Neely, Keiji Kuba, Anthony Cammarato, Kazuya Isobe, Sabine Amann, Liyong Zhang, Mitsushige Murata, Lisa Elmén, Vaijayanti Gupta, Suchir Arora, Rinku Sarangi, Debasis Dan, Susumu Fujisawa, Takako Usami, Cui-ping Xia, Alex C. Keene, Nakissa N. Alayari, Hiroyuki Yamakawa, Ulrich Elling, Christian Berger, Maria Novatchkova, Rubina Koglgruber, Keiichi Fukuda, Hiroshi Nishina, Mitsuaki Isobe, J. Andrew Pospisilik, Yumiko Imai, Arne Pfeufer, Andrew A Hicks, Peter P. Pramstaller, Sai Subramaniam, Akinori Kimura, Karen Ocorr, Rolf Bodmer, Josef M. Penninger

Cell. Author manuscript; available in PMC 2011 Apr 2.

Published in final edited form as: Cell. 2010 Apr 2; 141(1): 142–153. doi: 10.1016/j.cell.2010.02.023

PMCID:: PMC2855221

Abstract Article PDF–5.3M

Select item 304044118.

A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionary-conserved pain gene

G. Gregory Neely, Andreas Hess, Michael Costigan, Alex C. Keene, Spyros Goulas, Michiel Langeslag, Robert S Griffin, Inna Belfer, Feng Dai, Shad Smith, Luda Diatchenko, Vaijayanti Gupta, Cui-ping Xia, Sabina Amann, Silke Kreitz, Cornelia Heindl-Erdmann, Susanne Wolz, Cindy V. Ly, Suchir Arora, Rinku Sarangi, Debasis Dan, Maria Novatchkova, Mark Rosenzweig, Dustin Gibson, Darwin Truong, Daniel Schramek, Tamara Zoranovic, Shane J. F. Cronin, Belinda Angjeli, Kay Brune, Georg Dietzl, William Maixner, Arabella Meixner, Winston Thomas, J. Andrew Pospisilik, Mattias Alenius, Michaela Kress, Sai Subramaniam, Paul A. Garrity, Hugo J. Bellen, Clifford J. Woolf, Josef M. Penninger

Cell. Author manuscript; available in PMC 2011 Nov 12.

Published in final edited form as: Cell. 2010 Nov 12; 143(4): 628–638. doi: 10.1016/j.cell.2010.09.047

PMCID:: PMC3040441

Abstract Article PDF–2.0M

Select item 353067719.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 570780520.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

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