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Select item 56910621.

Regulation of gene expression and RNA editing in Drosophila adapting to divergent microclimates

Arielle L. Yablonovitch, Jeremy Fu, Kexin Li, Simpla Mahato, Lin Kang, Eugenia Rashkovetsky, Abraham B. Korol, Hua Tang, Pawel Michalak, Andrew C. Zelhof, Eviatar Nevo, Jin Billy Li

Nat Commun. 2017; 8: 1570. Published online 2017 Nov 17. doi: 10.1038/s41467-017-01658-2

PMCID:: PMC5691062

Abstract Article PDF–1.1M

Select item 43205062.

Imaging the Drosophila retina: zwitterionic buffers PIPES and HEPES induce morphological artifacts in tissue fixation

Jing Nie, Simpla Mahato, Andrew C Zelhof

BMC Dev Biol. 2015; 15: 10. Published online 2015 Feb 3. doi: 10.1186/s12861-015-0056-y

PMCID:: PMC4320506

Abstract Article PDF–2.8M

Select item 23871853.

Preserving cell shape under environmental stress

Boaz Cook, Robert W. Hardy, William B. McConnaughey, Charles S. Zuker

Nature. Author manuscript; available in PMC 2008 Sep 20.

Published in final edited form as: Nature. 2008 Mar 20; 452(7185): 361–364. Published online 2008 Feb 24. doi: 10.1038/nature06603

PMCID:: PMC2387185

Abstract Article PDF–1.2M

Select item 40213554.

chaoptin, prominin, eyes shut and crumbs form a genetic network controlling the apical compartment of Drosophila photoreceptor cells

Nagananda Gurudev, Michaela Yuan, Elisabeth Knust

Biol Open. 2014 May 15; 3(5): 332–341. Published online 2014 Apr 4. doi: 10.1242/bio.20147310

PMCID:: PMC4021355

Abstract Article PDF–1.2M

Select item 48758595.

Two temporal functions of Glass: ommatidium patterning and photoreceptor differentiation

Xulong Liang, Simpla Mahato, Chris Hemmerich, Andrew C. Zelhof

Dev Biol. Author manuscript; available in PMC 2017 Jun 1.

Published in final edited form as: Dev Biol. 2016 Jun 1; 414(1): 4–20. Published online 2016 Apr 19. doi: 10.1016/j.ydbio.2016.04.012

PMCID:: PMC4875859

Abstract Article PDF–3.4M

Select item 112586416.

Eye proteome of Drosophila melanogaster

Mukesh Kumar, Canan Has, Khanh Lam-Kamath, Sophie Ayciriex, Deepshe Dewett, Mhamed Bashir, Clara Poupault, Kai Schuhmann, Henrik Thomas, Oskar Knittelfelder, Bharath Kumar Raghuraman, Robert Ahrends, Jens Rister, Andrej Shevchenko

Proteomics. Author manuscript; available in PMC 2024 Jul 19.

Published in final edited form as: Proteomics. 2024 May; 24(10): e2300330. Published online 2023 Nov 14. doi: 10.1002/pmic.202300330

PMCID:: PMC11258641

Abstract Article PDF–892K

Select item 41689987.

The Actomyosin Machinery Is Required for Drosophila Retinal Lumen Formation

Jing Nie, Simpla Mahato, Andrew C. Zelhof

PLoS Genet. 2014 Sep; 10(9): e1004608. Published online 2014 Sep 18. doi: 10.1371/journal.pgen.1004608

PMCID:: PMC4168998

Abstract Article PDF–2.9M

Select item 47322878.

CULD is required for rhodopsin and TRPL channel endocytic trafficking and survival of photoreceptor cells

Ying Xu, Tao Wang

J Cell Sci. 2016 Jan 15; 129(2): 394–405. doi: 10.1242/jcs.178764

PMCID:: PMC4732287

Abstract Article

Select item 73329879.

Ageing, metabolism and the intestine

Maja C Funk, Jun Zhou, Michael Boutros

EMBO Rep. 2020 Jul 3; 21(7): e50047. Published online 2020 Jun 21. doi: 10.15252/embr.202050047

PMCID:: PMC7332987

Abstract Article PDF–1.3M

Select item 146013210.

Genes expressed in the ring gland, the major endocrine organ of Drosophila melanogaster.

P D Harvie, M Filippova, P J Bryant

Genetics. 1998 May; 149(1): 217–231. doi: 10.1093/genetics/149.1.217

PMCID:: PMC1460132

Summary PDF–896K

Select item 460415411.

Proteomic Analysis of the Ubiquitin Landscape in the Drosophila Embryonic Nervous System and the Adult Photoreceptor Cells

Juanma Ramirez, Aitor Martinez, Benoit Lectez, So Young Lee, Maribel Franco, Rosa Barrio, Gunnar Dittmar, Ugo Mayor

PLoS One. 2015; 10(10): e0139083. Published online 2015 Oct 13. doi: 10.1371/journal.pone.0139083

PMCID:: PMC4604154

Abstract Article PDF–3.1M

Select item 482931712.

Genome-wide identification and characterization of tissue-specific RNA editing events in D. melanogaster and their potential role in regulating alternative splicing

Alborz Mazloomian, Irmtraud M Meyer

RNA Biol. 2015 Dec; 12(12): 1391–1401. Published online 2015 Oct 29. doi: 10.1080/15476286.2015.1107703

PMCID:: PMC4829317

Abstract Article PDF–609K

Select item 607860413.

Human R1441C LRRK2 regulates the synaptic vesicle proteome and phosphoproteome in a Drosophila model of Parkinson’s disease

Md Shariful Islam, Hendrik Nolte, Wright Jacob, Anna B. Ziegler, Stefanie Pütz, Yael Grosjean, Karolina Szczepanowska, Aleksandra Trifunovic, Thomas Braun, Hermann Heumann, Rolf Heumann, Bernhard Hovemann, Darren J. Moore, Marcus Krüger

Hum Mol Genet. 2016 Dec 15; 25(24): 5365–5382. Published online 2016 Oct 29. doi: 10.1093/hmg/ddw352

PMCID:: PMC6078604

Abstract Article PDF–1.9M

Select item 439805014.

The Genetic Basis for Variation in Olfactory Behavior in Drosophila melanogaster

Gunjan H. Arya, Michael M. Magwire, Wen Huang, Yazmin L. Serrano-Negron, Trudy F.C. Mackay, Robert R.H. Anholt

Chem Senses. 2015 May; 40(4): 233–243. Published online 2015 Feb 15. doi: 10.1093/chemse/bjv001

PMCID:: PMC4398050

Abstract Article PDF–8.9M

Select item 285522115.

A global in vivo Drosophila RNAi screen identifies NOT3 as a conserved regulator of heart function

G. Gregory Neely, Keiji Kuba, Anthony Cammarato, Kazuya Isobe, Sabine Amann, Liyong Zhang, Mitsushige Murata, Lisa Elmén, Vaijayanti Gupta, Suchir Arora, Rinku Sarangi, Debasis Dan, Susumu Fujisawa, Takako Usami, Cui-ping Xia, Alex C. Keene, Nakissa N. Alayari, Hiroyuki Yamakawa, Ulrich Elling, Christian Berger, Maria Novatchkova, Rubina Koglgruber, Keiichi Fukuda, Hiroshi Nishina, Mitsuaki Isobe, J. Andrew Pospisilik, Yumiko Imai, Arne Pfeufer, Andrew A Hicks, Peter P. Pramstaller, Sai Subramaniam, Akinori Kimura, Karen Ocorr, Rolf Bodmer, Josef M. Penninger

Cell. Author manuscript; available in PMC 2011 Apr 2.

Published in final edited form as: Cell. 2010 Apr 2; 141(1): 142–153. doi: 10.1016/j.cell.2010.02.023

PMCID:: PMC2855221

Abstract Article PDF–5.3M

Select item 304044116.

A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionary-conserved pain gene

G. Gregory Neely, Andreas Hess, Michael Costigan, Alex C. Keene, Spyros Goulas, Michiel Langeslag, Robert S Griffin, Inna Belfer, Feng Dai, Shad Smith, Luda Diatchenko, Vaijayanti Gupta, Cui-ping Xia, Sabina Amann, Silke Kreitz, Cornelia Heindl-Erdmann, Susanne Wolz, Cindy V. Ly, Suchir Arora, Rinku Sarangi, Debasis Dan, Maria Novatchkova, Mark Rosenzweig, Dustin Gibson, Darwin Truong, Daniel Schramek, Tamara Zoranovic, Shane J. F. Cronin, Belinda Angjeli, Kay Brune, Georg Dietzl, William Maixner, Arabella Meixner, Winston Thomas, J. Andrew Pospisilik, Mattias Alenius, Michaela Kress, Sai Subramaniam, Paul A. Garrity, Hugo J. Bellen, Clifford J. Woolf, Josef M. Penninger

Cell. Author manuscript; available in PMC 2011 Nov 12.

Published in final edited form as: Cell. 2010 Nov 12; 143(4): 628–638. doi: 10.1016/j.cell.2010.09.047

PMCID:: PMC3040441

Abstract Article PDF–2.0M

Select item 353067717.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression

Philippe Batut, Alexander Dobin, Charles Plessy, Piero Carninci, Thomas R. Gingeras

Genome Res. 2013 Jan; 23(1): 169–180. doi: 10.1101/gr.139618.112

PMCID:: PMC3530677

Abstract Article PDF–1.5M

Select item 570780518.

Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species

Piero Sanfilippo, Jiayu Wen, Eric C. Lai

Genome Biol. 2017; 18: 229. Published online 2017 Nov 30. doi: 10.1186/s13059-017-1358-0

PMCID:: PMC5707805

Abstract Article PDF–3.2M

Select item 568900219.

Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster

Xiaochuan Liu, Jaime Freitas, Dinghai Zheng, Marta S. Oliveira, Mainul Hoque, Torcato Martins, Telmo Henriques, Bin Tian, Alexandra Moreira

RNA. 2017 Dec; 23(12): 1807–1816. doi: 10.1261/rna.062661.117

PMCID:: PMC5689002

Abstract Article PDF–4.0M

Select item 435288720.

The Release 6 reference sequence of the Drosophila melanogaster genome

Roger A. Hoskins, Joseph W. Carlson, Kenneth H. Wan, Soo Park, Ivonne Mendez, Samuel E. Galle, Benjamin W. Booth, Barret D. Pfeiffer, Reed A. George, Robert Svirskas, Martin Krzywinski, Jacqueline Schein, Maria Carmela Accardo, Elisabetta Damia, Giovanni Messina, María Méndez-Lago, Beatriz de Pablos, Olga V. Demakova, Evgeniya N. Andreyeva, Lidiya V. Boldyreva, Marco Marra, A. Bernardo Carvalho, Patrizio Dimitri, Alfredo Villasante, Igor F. Zhimulev, Gerald M. Rubin, Gary H. Karpen, Susan E. Celniker

Genome Res. 2015 Mar; 25(3): 445–458. doi: 10.1101/gr.185579.114

PMCID:: PMC4352887

Abstract Article PDF–1022K

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