PMC Links for Gene (Select 214855) - PMC

Select item 58194531.

Regulation of inflammatory responses by dynamic subcellular localization of RNA-binding protein Arid5a

Mitsuru Higa, Masahiro Oka, Yoshitaka Fujihara, Kazuya Masuda, Yoshihiro Yoneda, Tadamitsu Kishimoto

Proc Natl Acad Sci U S A. 2018 Feb 6; 115(6): E1214–E1220. Published online 2018 Jan 22. doi: 10.1073/pnas.1719921115

PMCID:: PMC5819453

Select item 36774442.

Arid5a controls IL-6 mRNA stability, which contributes to elevation of IL-6 level in vivo

Kazuya Masuda, Barry Ripley, Riko Nishimura, Takashi Mino, Osamu Takeuchi, Go Shioi, Hiroshi Kiyonari, Tadamitsu Kishimoto

Proc Natl Acad Sci U S A. 2013 Jun 4; 110(23): 9409–9414. Published online 2013 May 15. doi: 10.1073/pnas.1307419110

PMCID:: PMC3677444

Abstract Article PDF–797K

Select item 94926383.

Arid5a mediates an IL-17-dependent pathway that drives autoimmunity but not antifungal host defense

Tiffany C. Taylor, Yang Li, De-Dong Li, Saikat Majumder, Mandy McGeachy, Partha S. Biswas, Sebastien Gingras, Sarah L. Gaffen

J Immunol. Author manuscript; available in PMC 2023 Sep 15.

Published in final edited form as: J Immunol. 2022 Aug 8 : ji2200132. Published online 2022 Aug 8. doi: 10.4049/jimmunol.2200132

PMCID:: PMC9492638

Abstract Article PDF–1.0M

Select item 66607224.

Feedback regulation of Arid5a and Ppar-γ2 maintains adipose tissue homeostasis

Jaya Prakash Chalise, Shigeru Hashimoto, Gyanu Parajuli, Sujin Kang, Shailendra Kumar Singh, Yohannes Gemechu, Hozaifa Metwally, Kishan Kumar Nyati, Praveen Kumar Dubey, Mohammad Mahabub-Uz Zaman, Yasuharu Nagahama, Hanieh Hamza, Kazuya Masuda, Tadamitsu Kishimoto

Proc Natl Acad Sci U S A. 2019 Jul 23; 116(30): 15128–15133. Published online 2019 Jul 9. doi: 10.1073/pnas.1906712116

PMCID:: PMC6660722

Abstract Article PDF–1.2M

Select item 53895185.

TLR4-induced NF-κB and MAPK signaling regulate the IL-6 mRNA stabilizing protein Arid5a

Kishan K. Nyati, Kazuya Masuda, Mohammad Mahabub-Uz Zaman, Praveen K. Dubey, David Millrine, Jaya P. Chalise, Mitsuru Higa, Songling Li, Daron M. Standley, Kazunobu Saito, Hamza Hanieh, Tadamitsu Kishimoto

Nucleic Acids Res. 2017 Mar 17; 45(5): 2687–2703. Published online 2017 Feb 7. doi: 10.1093/nar/gkx064

PMCID:: PMC5389518

Abstract Article PDF–8.4M

Select item 61886686.

IL-17 integrates multiple self-reinforcing, feed-forward mechanisms through the RNA-binding protein Arid5a

Nilesh Amatya, Erin E. Childs, J. Agustin Cruz, Felix E. Y. Aggor, Abhishek V. Garg, Andrea J. Berman, Johann E. Gudjonsson, Ulus Atasoy, Sarah L. Gaffen

Sci Signal. Author manuscript; available in PMC 2019 Oct 9.

Published in final edited form as: Sci Signal. 2018 Oct 9; 11(551): eaat4617. Published online 2018 Oct 9. doi: 10.1126/scisignal.aat4617

PMCID:: PMC6188668

Abstract Article PDF–2.0M

Select item 50682547.

Arid5a exacerbates IFN-γ–mediated septic shock by stabilizing T-bet mRNA

Mohammad Mahabub-Uz Zaman, Kazuya Masuda, Kishan Kumar Nyati, Praveen Kumar Dubey, Barry Ripley, Kai Wang, Jaya Prakash Chalise, Mitsuru Higa, Hamza Hanieh, Tadamitsu Kishimoto

Proc Natl Acad Sci U S A. 2016 Oct 11; 113(41): 11543–11548. Published online 2016 Sep 26. doi: 10.1073/pnas.1613307113

PMCID:: PMC5068254

Abstract Article PDF–1.1M

Select item 30780738.

Arid5a cooperates with Sox9 to stimulate chondrocyte-specific transcription

Katsuhiko Amano, Kenji Hata, Shuji Muramatsu, Makoto Wakabayashi, Yoko Takigawa, Koichiro Ono, Masako Nakanishi, Rikako Takashima, Mikihiko Kogo, Akio Matsuda, Riko Nishimura, Toshiyuki Yoneda

Mol Biol Cell. 2011 Apr 15; 22(8): 1300–1311. doi: 10.1091/mbc.E10-07-0566

PMCID:: PMC3078073

Abstract Article PDF–2.6M

Select item 48216479.

Arid5a regulates naive CD4⁺ T cell fate through selective stabilization of Stat3 mRNA

Kazuya Masuda, Barry Ripley, Kishan Kumar Nyati, Praveen Kumar Dubey, Mohammad Mahabub-Uz Zaman, Hamza Hanieh, Mitsuru Higa, Kazuo Yamashita, Daron M. Standley, Tsukasa Mashima, Masato Katahira, Toru Okamoto, Yoshiharu Matsuura, Osamu Takeuchi, Tadamitsu Kishimoto

J Exp Med. 2016 Apr 4; 213(4): 605–619. doi: 10.1084/jem.20151289

PMCID:: PMC4821647

Abstract Article PDF–2.7M

Select item 894017710.

Control of spinal motor neuron terminal differentiation through sustained Hoxc8 gene activity

Catarina Catela, Yihan Chen, Yifei Weng, Kailong Wen, Paschalis Kratsios

eLife. 2022; 11: e70766. Published online 2022 Mar 22. doi: 10.7554/eLife.70766

PMCID:: PMC8940177

Abstract Article PDF–6.0M

Select item 30876311.

GenePaint.org: an atlas of gene expression patterns in the mouse embryo

Axel Visel, Christina Thaller, Gregor Eichele

Nucleic Acids Res. 2004 Jan 1; 32(Database issue): D552–D556. doi: 10.1093/nar/gkh029

PMCID:: PMC308763

Abstract Article PDF–253K

Select item 793877012.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 255627013.

Large-scale gene trapping in C57BL/6N mouse embryonic stem cells

Gwenn M. Hansen, Diane C. Markesich, Michael B. Burnett, Qichao Zhu, Karen M. Dionne, Lizabeth J. Richter, Richard H. Finnell, Arthur T. Sands, Brian P. Zambrowicz, Alejandro Abuin

Genome Res. 2008 Oct; 18(10): 1670–1679. doi: 10.1101/gr.078352.108

PMCID:: PMC2556270

Abstract Article PDF–493K

Select item 28355414.

Wnk1 kinase deficiency lowers blood pressure in mice: A gene-trap screen to identify potential targets for therapeutic intervention

Brian P. Zambrowicz, Alejandro Abuin, Ramiro Ramirez-Solis, Lizabeth J. Richter, James Piggott, Hector BeltrandelRio, Eric C. Buxton, Joel Edwards, Rick A. Finch, Carl J. Friddle, Anupma Gupta, Gwenn Hansen, Yi Hu, Wenhu Huang, Crystal Jaing, Billie Wayne Key, Jr., Peter Kipp, Buckley Kohlhauff, Zhi-Qing Ma, Diane Markesich, Robert Payne, David G. Potter, Ny Qian, Joseph Shaw, Jeff Schrick, Zheng-Zheng Shi, Mary Jean Sparks, Isaac Van Sligtenhorst, Peter Vogel, Wade Walke, Nianhua Xu, Qichao Zhu, Christophe Person, Arthur T. Sands

Proc Natl Acad Sci U S A. 2003 Nov 25; 100(24): 14109–14114. Published online 2003 Nov 10. doi: 10.1073/pnas.2336103100

Correction in:: Proc Natl Acad Sci U S A. 2004 Mar 23; 101(12): 4332.

PMCID:: PMC283554

Abstract Article PDF–481K

Select item 302253415.

A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo

Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio

PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582

PMCID:: PMC3022534

Abstract Article PDF–3.8M

Select item 31099216.

RIKEN Integrated Sequence Analysis (RISA) System—384-Format Sequencing Pipeline with 384 Multicapillary Sequencer

Kazuhiro Shibata, Masayoshi Itoh, Katsunori Aizawa, Sumiharu Nagaoka, Nobuya Sasaki, Piero Carninci, Hideaki Konno, Junichi Akiyama, Katsuo Nishi, Tokuji Kitsunai, Hideo Tashiro, Mari Itoh, Noriko Sumi, Yoshiyuki Ishii, Shin Nakamura, Makoto Hazama, Tsutomu Nishine, Akira Harada, Rintaro Yamamoto, Hiroyuki Matsumoto, Sumito Sakaguchi, Takashi Ikegami, Katsuya Kashiwagi, Syuji Fujiwake, Kouji Inoue, Yoshiyuki Togawa, Masaki Izawa, Eiji Ohara, Masanori Watahiki, Yuko Yoneda, Tomokazu Ishikawa, Kaori Ozawa, Takumi Tanaka, Shuji Matsuura, Jun Kawai, Yasushi Okazaki, Masami Muramatsu, Yorinao Inoue, Akira Kira, Yoshihide Hayashizaki

Genome Res. 2000 Nov; 10(11): 1757–1771. doi: 10.1101/gr.152600

PMCID:: PMC310992

Abstract Article PDF–3.4M

Select item 31098017.

Normalization and Subtraction of Cap-Trapper-Selected cDNAs to Prepare Full-Length cDNA Libraries for Rapid Discovery of New Genes

Piero Carninci, Yuko Shibata, Norihito Hayatsu, Yuichi Sugahara, Kazuhiro Shibata, Masayoshi Itoh, Hideaki Konno, Yasushi Okazaki, Masami Muramatsu, Yoshihide Hayashizaki

Genome Res. 2000 Oct; 10(10): 1617–1630. doi: 10.1101/gr.145100

PMCID:: PMC310980

Abstract Article PDF–1.4M

Select item 13924118.

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences

Mammalian Gene Collection (MGC) Program Team

Proc Natl Acad Sci U S A. 2002 Dec 24; 99(26): 16899–16903. Published online 2002 Dec 11. doi: 10.1073/pnas.242603899

PMCID:: PMC139241

Abstract Article PDF–118K

Select item 317805919.

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas

Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042

PMCID:: PMC3178059

Abstract Article PDF–1.0M

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