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Items: 1 to 20 of 52

1.
Identifying piRNA targets on mRNAs in C. elegans using a deep multi-head attention network
Tzu-Hsien Yang, Sheng-Cian Shiue, Kuan-Yu Chen, Yan-Yuan Tseng, Wei-Sheng Wu
BMC Bioinformatics. 2021; 22: 503. Published online 2021 Oct 16. doi: 10.1186/s12859-021-04428-6
PMCID:
PMC8520261
AbstractArticlePDF–4.4M
2.
Transgenerational Sterility of Piwi Mutants Represents a Dynamic Form of Adult Reproductive Diapause
Bree Heestand, Matt Simon, Stephen Frenk, Denis Titov, Shawn Ahmed
Cell Rep. Author manuscript; available in PMC 2018 Apr 26.
Published in final edited form as: Cell Rep. 2018 Apr 3; 23(1): 156–171. doi: 10.1016/j.celrep.2018.03.015
PMCID:
PMC5918633
AbstractArticlePDF–1.5M
3.
The genetic basis of natural variation in a phoretic behavior
Daehan Lee, Heeseung Yang, Jun Kim, Shannon Brady, Stefan Zdraljevic, Mostafa Zamanian, Heekyeong Kim, Young-ki Paik, Leonid Kruglyak, Erik C. Andersen, Junho Lee
Nat Commun. 2017; 8: 273. Published online 2017 Aug 17. doi: 10.1038/s41467-017-00386-x
PMCID:
PMC5561207
AbstractArticlePDF–1.1M
4.
The influences of PRG-1 on the expression of small RNAs and mRNAs
Jia-Jia Wang, Dong-Ya Cui, Tengfei Xiao, Xubin Sun, Peng Zhang, Runsheng Chen, Shunmin He, Da-Wei Huang
BMC Genomics. 2014; 15(1): 321. Published online 2014 Apr 30. doi: 10.1186/1471-2164-15-321
PMCID:
PMC4035053
AbstractArticlePDF–2.7M
5.
piRNAs initiate an epigenetic memory of non-self RNA in the C. elegans germline
Masaki Shirayama, Meetu Seth, Heng-Chi Lee, Weifeng Gu, Takao Ishidate, Darryl Conte, Craig C. Mello
Cell. Author manuscript; available in PMC 2013 Mar 14.
Published in final edited form as: Cell. 2012 Jul 6; 150(1): 65–77. Published online 2012 Jun 25. doi: 10.1016/j.cell.2012.06.015
PMCID:
PMC3597741
AbstractArticlePDF–3.7M
6.
Extremely stable Piwi-induced gene silencing in Caenorhabditis elegans
Maartje J Luteijn, Petra van Bergeijk, Lucas J T Kaaij, Miguel Vasconcelos Almeida, Elke F Roovers, Eugene Berezikov, René F Ketting
EMBO J. 2012 Aug 15; 31(16): 3422–3430. Published online 2012 Jul 31. doi: 10.1038/emboj.2012.213
PMCID:
PMC3419935
AbstractArticlePDF–1.0M
7.
C. elegans piRNAs mediate the genome-wide surveillance of germline transcripts
Heng-Chi Lee, Weifeng Gu, Masaki Shirayama, Elaine Youngman, Darryl Conte, Jr., Craig C. Mello
Cell. Author manuscript; available in PMC 2013 Jan 6.
Published in final edited form as: Cell. 2012 Jul 6; 150(1): 78–87. Published online 2012 Jun 25. doi: 10.1016/j.cell.2012.06.016
PMCID:
PMC3410639
AbstractArticlePDF–1.4M
8.
Germ granule dysfunction is a hallmark and mirror of Piwi mutant sterility
Maya Spichal, Bree Heestand, Katherine Kretovich Billmyre, Stephen Frenk, Craig C. Mello, Shawn Ahmed
Nat Commun. 2021; 12: 1420. Published online 2021 Mar 3. doi: 10.1038/s41467-021-21635-0
PMCID:
PMC7930041
AbstractArticlePDF–3.9M
9.
Piwi/PRG-1 Argonaute and TGF-β mediate Transgenerational Learned Pathogenic Avoidance
Rebecca S. Moore, Rachel Kaletsky, Coleen T. Murphy
Cell. Author manuscript; available in PMC 2020 Sep 25.
Published in final edited form as: Cell. 2019 Jun 13; 177(7): 1827–1841.e12. Published online 2019 Jun 6. doi: 10.1016/j.cell.2019.05.024
PMCID:
PMC7518193
AbstractArticlePDF–871K
10.
The Dynamics of P Granule Liquid Droplets Are Regulated by the Caenorhabditis elegans Germline RNA Helicase GLH-1 via Its ATP Hydrolysis Cycle
Wenjun Chen, Yabing Hu, Charles F. Lang, Jordan S. Brown, Sierra Schwabach, Xiaoyan Song, Ying Zhang, Edwin Munro, Karen Bennett, Donglei Zhang, Heng-Chi Lee
Genetics. 2020 Jun; 215(2): 421–434. Published online 2020 Apr 3. doi: 10.1534/genetics.120.303052
PMCID:
PMC7268986
AbstractArticlePDF–2.1M
11.
A Neuronal piRNA Pathway Inhibits Axon Regeneration in C. elegans
Kyung Won Kim, Ngang Heok Tang, Matthew G. Andrusiak, Zilu Wu, Andrew D. Chisholm, Yishi Jin
Neuron. Author manuscript; available in PMC 2018 Aug 7.
Published in final edited form as: Neuron. 2018 Feb 7; 97(3): 511–519.e6. Published online 2018 Jan 27. doi: 10.1016/j.neuron.2018.01.014
PMCID:
PMC5866297
AbstractArticlePDF–1.2M
12.
The ribonuclease PARN-1 trims piRNA 3′ ends to promote transcriptome surveillance in C. elegans
Wen Tang, Shikui Tu, Heng-Chi Lee, Zhiping Weng, Craig C. Mello
Cell. Author manuscript; available in PMC 2017 Feb 25.
Published in final edited form as: Cell. 2016 Feb 25; 164(5): 974–984. doi: 10.1016/j.cell.2016.02.008
PMCID:
PMC4785802
AbstractArticlePDF–1.3M
13.
Lack of pairing during meiosis triggers multigenerational transgene silencing in Caenorhabditis elegans
Luciana E. Leopold, Bree N. Heestand, Soobin Seong, Ludmila Shtessel, Shawn Ahmed
Proc Natl Acad Sci U S A. 2015 May 19; 112(20): E2667–E2676. Published online 2015 May 4. doi: 10.1073/pnas.1501979112
PMCID:
PMC4443339
AbstractArticlePDF–2.1M
14.
Silent no more: Endogenous small RNA pathways promote gene expression
Christopher J Wedeles, Monica Z Wu, Julie M Claycomb
Worm. 2014; 3: e28641. Published online 2014 Apr 2. doi: 10.4161/worm.28641
PMCID:
PMC4165530
AbstractArticlePDF–1.0M
15.
PID-1 is a novel factor that operates during 21U-RNA biogenesis in Caenorhabditis elegans
Bruno F.M. de Albuquerque, Maartje J. Luteijn, Ricardo J. Cordeiro Rodrigues, Petra van Bergeijk, Selma Waaijers, Lucas J.T. Kaaij, Holger Klein, Mike Boxem, René F. Ketting
Genes Dev. 2014 Apr 1; 28(7): 683–688. doi: 10.1101/gad.238220.114
PMCID:
PMC4015495
AbstractArticlePDF–282K
16.
Reduced insulin/IGF-1 signaling restores germ cell immortality to Caenorhabditis elegans Piwi mutants
Matt Simon, Peter Sarkies, Kohta Ikegami, Anna-Lisa Doebley, Leonard D. Goldstein, Jacinth Mitchell, Aisa Sakaguchi, Eric A. Miska, Shawn Ahmed
Cell Rep. Author manuscript; available in PMC 2014 Jun 9.
Published in final edited form as: Cell Rep. 2014 May 8; 7(3): 762–773. Published online 2014 Apr 24. doi: 10.1016/j.celrep.2014.03.056
PMCID:
PMC4049074
AbstractArticlePDF–1.1M
17.
Argonautes ALG-3 and ALG-4 are required for spermatogenesis-specific 26G-RNAs and thermotolerant sperm in Caenorhabditis elegans
Colin C. Conine, Pedro J. Batista, Weifeng Gu, Julie M. Claycomb, Daniel A. Chaves, Masaki Shirayama, Craig C. Mello
Proc Natl Acad Sci U S A. 2010 Feb 23; 107(8): 3588–3593. Published online 2010 Feb 4. doi: 10.1073/pnas.0911685107
PMCID:
PMC2840486
AbstractArticlePDF–940K
18.
A C. elegans Piwi, PRG-1, regulates 21U-RNAs during spermatogenesis
Guilin Wang, Valerie Reinke
Curr Biol. Author manuscript; available in PMC 2009 Jun 24.
Published in final edited form as: Curr Biol. 2008 Jun 24; 18(12): 861–867. Published online 2008 May 22. doi: 10.1016/j.cub.2008.05.009
PMCID:
PMC2494713
AbstractArticlePDF–2.1M
19.
ZNFX-1 Functions Within Perinuclear Nuage to Balance Epigenetic Signals
Takao Ishidate, Ahmet R. Ozturk, Daniel J. Durning, Rita Sharma, En-zhi Shen, Hao Chen, Meetu Seth, Masaki Shirayama, Craig C. Mello
Mol Cell. Author manuscript; available in PMC 2019 May 17.
Published in final edited form as: Mol Cell. 2018 May 17; 70(4): 639–649.e6. doi: 10.1016/j.molcel.2018.04.009
PMCID:
PMC5994929
AbstractArticlePDF–1.3M
20.
A Small-RNA-Mediated Feedback Loop Maintains Proper Levels of 22G-RNAs in C. elegans
Alicia K. Rogers, Carolyn M. Phillips
Cell Rep. Author manuscript; available in PMC 2020 Oct 31.
Published in final edited form as: Cell Rep. 2020 Oct 20; 33(3): 108279. doi: 10.1016/j.celrep.2020.108279
PMCID:
PMC7603289
AbstractArticlePDF–1.5M

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