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GenBank: NTOF01000069.1
FASTA Graphics
LOCUS NTOF01000069 3685 bp DNA linear BCT 05-OCT-2017 DEFINITION Escherichia coli strain MOD1-EC6212 MOD1-EC6212_69_length_3685_cov_51.24, whole genome shotgun sequence. ACCESSION NTOF01000069 NTOF01000000 VERSION NTOF01000069.1 DBLINK BioProject: PRJNA230969 BioSample: SAMN04902898 KEYWORDS WGS. SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 3685) AUTHORS Gangiredla,J., Mammel,M.K., Barnaba,T.J., Tartera,C., Gebru,S.T., Patel,I.R., Leonard,S.R., Kotewicz,M.L., Lampel,K.A., Elkins,C.A. and Lacher,D.W. TITLE Species-Wide Collection of Escherichia coli Isolates for Examination of Genomic Diversity JOURNAL Genome Announc 5 (50), e01321-17 (2017) PUBMED 29242221 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3685) AUTHORS Gangiredla,J., Lacher,D.W., Mammel,M.K., Barnaba,T., Tartera,C., Gebru,S., Patel,I.R., Leonard,S.R., Lampel,K.A. and Elkins,C.A. TITLE Direct Submission JOURNAL Submitted (11-SEP-2017) CFSAN-ORS-DM-MMSB, US Food and Drug Administration, 5100 Paint Branch Parkway, College Park, MD 20740, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.8.2 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 45.5x Sequencing Technology :: Illumina NextSeq 500 ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..3685 /organism="Escherichia coli" /mol_type="genomic DNA" /submitter_seqid="MOD1-EC6212_69_length_3685_cov_51.24" /strain="MOD1-EC6212" /isolation_source="feces" /host="Homo sapiens" /db_xref="taxon:562" /geo_loc_name="Singapore" /collection_date="1999-06-10" /collected_by="FDA" ORIGIN 1 gagccatgat caaactcttc aatttaaaag tttgatgctc aaagaattaa acttcgtaat 61 gaattacgtg ttcactcctg agacttggta ttcatttttc gtcttgcgac gtcaagaatc 121 cgtatcttcg agtgcccaca cagattgtct gataaattgt taaagagcag tgccgcttcg 181 ctttttctca acggcgcggg gtgtgcataa tacgctttcc cgctacagag tcaagcattt 241 attttgcttt ccctgccgaa attctcagga gaaccccgct gacccggcgg cgtgtttgcc 301 gttgttccgt gtcagtggtg gcgcattata gggagttatt ccggcctgac aagaggaaat 361 ttaaaataat tttctgatcg cgcatttttt cagcaaaagc cccgttaatg tgccataaaa 421 caagcaattt gccgtttttg caaccgtaat cacacttcct ggtggcatac taagaaggaa 481 taaaaagaaa aaggaagatt agtaatgcct ttaagcgcac aacagttagc tgcacagaaa 541 aacctttcgt atgttctggc tgagaagctg gcgcagcgga tcttaaaagg tgaatatgaa 601 cccggcacca ttttgcctgg tgagattgag ctgggcgagc aatttggagt gagtcgtaca 661 gcggtacgcg aagcggtcaa aacgttaacg gcaaaaggga tggttttacc gcgaccgcga 721 attggtaccc gagtcatgcc acaatcgaac tggaattttc ttgatcagga attgcttacc 781 tggtggatga cagaagagaa ctttcatcag gtcatcgatc actttctggt tatgcgtatc 841 tgtctggagc cgcaagcttg cctactggca gcaaaggttg gcaccgcgga acagaaggcg 901 catctcaata cgttaatggc cgaaatggcg gcattaaaag agaactttcg ccgtgaacgc 961 tggatcgaag tcgatatggc ctggcatgag catatctatg aaatgagcgc caatccgttt 1021 ttgacctcat tcgcctcgct attccattcg gtttatcaca cttacttcac gtcaattacc 1081 agcgacacag tgataaagct ggatctgcac caggcgattg tcgatgcgat tatccaaagc 1141 gatggcgacg cggcatttaa agcttgtcag gcgctgctac gctcaccaga taagtgataa 1201 cccgataaca ggacattgaa tgagcgataa aaagaagcgc agtatggcgg gtttgccgtg 1261 gatcgcggcg atggccttct tcatgcaggc acttgatgcc actattctga ataccgcctt 1321 acccgcaatc gctcatagcc ttaatcgttc tcctctcgcg atgcaatcag ccatcatcag 1381 ttatacgctg acggtggcga tgcttattcc ggtaagcgga tggctagccg atcgcttcgg 1441 tacgcgtcgc atatttaccc ttgccgtgag tctgttcacg ttgggttctc tggcctgcgc 1501 actttctaac tcgctaccac agctggttgt cttccgggtt attcagggga taggcggcgc 1561 aatgatgatg cctgttgctc ggctggcctt actgcgcgct tatcctcgta atgagcttct 1621 tcctgtattg aattttgtcg ccatgccggg tctggtgggg ccaattttag gccccgttct 1681 tggcggcgtg ctggtcacct gggcaacctg gcactggata tttttaatca atatccccat 1741 aggtattgcg ggccttcttt acgcgcacaa acatatgccc aatttcacca ccgcacgacg 1801 cagattcgat accactggct ttttgctgtt tggcctcagc cttgttctct tctcaagcgg 1861 aatagagcta ttcggggaaa agattgtcgc cagctggatt gccttgacgg taattgtcac 1921 cagcatcggg ttactgcttc tctatattct ccatgcgcga cgcacgccaa acccattaat 1981 ttcattagat ttatttaaaa cccgcacttt ctcgatcggt atcgtaggca atattgcaac 2041 ccgtctgggg accggctgtg taccgttcct tatgccattg atgttacagg taggatttgg 2101 gtatcaggcg tttattgctg gctgtatgat ggcaccgaca gcgttaggtt ccattattgc 2161 aaaatcgatg gttacccaag tcttacgtcg tctgggctat cgccatacgt tagtggggat 2221 cacggtgatt atagggctaa tgatcgctca gttctctttg caatcaccag caatggcgat 2281 atggatgctg atcttgccgt tgtttatatt agggatggct atgtcgacac aatttaccgc 2341 gatgaatacc atcacacttg ccgatctgac cgatgacaac gccagcagcg gtaacagtgt 2401 tctggcggtc acgcagcaac tgtcgatcag tttaggcgtt gctgtaagtg cggcagtcct 2461 tcgcgtttac gaagggatgg aaggcacaac gacagtcgaa caattccact atacgtttat 2521 cacgatgggc attattactg ttgcttcagc agcaatgttc atgctactga aaacaaccga 2581 tggtaataat ttgatcaaaa gacagcgtaa atctaagccg aaccacgttc catcagaatc 2641 ggagtaagtt gtaatcgttg ttgctgtagg gtcggctggg ttatccgatg gatgagtaca 2701 tcaatcgcca gctcccccag ttcatctttc ggttggtgta tagttgttaa tggtggcgtc 2761 ataaagcttg ccagttcgat atcgtcatag ccaatcaccg cgatatcctg cggaacctgt 2821 aactctgcct gatataacgc ctggtaaacg ccaacagcca tagcgtcatt tccggtaaag 2881 acggcctgag gacgcagcgg atgtgataac agttggcgca tagcgtcaaa cccgccgtta 2941 aattcaaaat caccagtgac ttcatagcca tcaggaatgt tgagacccgc acgtttcatc 3001 gccgcccgat aaccttccaa ccgcaggcgc gccggagttt tatccagcgg accggtaata 3061 caggcaatac gggtatgacc tttatcgatc agatattgcg ttgctaagtc tccgcccagc 3121 aacgagttat cctgaataag atcgctgtcg ccatcgaacg gagcccagtc catcatcacg 3181 gtaggcactg tcggataacg ttgcatgatt tcacgcgaag gctgatgcgt ttcggtgcac 3241 agtaacagca agccatcaac gcgtttttgc atcagcgttt ccagattacg attcatccgc 3301 tgttcatcgc cttcggtatt gcaaaggaca agactataac cgcgttcgaa gcagctgcgt 3361 tcaacgccac gcaccagttc tgaatagaaa ggattggtac tggcagtgat caacatgcca 3421 atggtatgtg tttgattgag tttgaggcta cgcgccagag ctgatggcgc gtaattgagt 3481 tctttaatcg ccgcttcaac tttggctgta atcgcttcac tgacgaagcg atctttattg 3541 ataacgtgag aaactgttga ggtagaaacg cccgccaggc gggcaacatc tttcattgta 3601 gccaagcgct gatgaatccc ctaatgattt ttatcaaaat cattaagtta aggtagatac 3661 acatcttgtc atatgatcaa atggt //
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