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Escherichia coli strain MOD1-EC6212 MOD1-EC6212_69_length_3685_cov_51.24, whole genome shotgun sequence

GenBank: NTOF01000069.1

FASTA Graphics 

LOCUS       NTOF01000069            3685 bp    DNA     linear   BCT 05-OCT-2017
DEFINITION  Escherichia coli strain MOD1-EC6212
            MOD1-EC6212_69_length_3685_cov_51.24, whole genome shotgun
            sequence.
ACCESSION   NTOF01000069 NTOF01000000
VERSION     NTOF01000069.1
DBLINK      BioProject: PRJNA230969
            BioSample: SAMN04902898
KEYWORDS    WGS.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 3685)
  AUTHORS   Gangiredla,J., Mammel,M.K., Barnaba,T.J., Tartera,C., Gebru,S.T.,
            Patel,I.R., Leonard,S.R., Kotewicz,M.L., Lampel,K.A., Elkins,C.A.
            and Lacher,D.W.
  TITLE     Species-Wide Collection of Escherichia coli Isolates for
            Examination of Genomic Diversity
  JOURNAL   Genome Announc 5 (50), e01321-17 (2017)
   PUBMED   29242221
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3685)
  AUTHORS   Gangiredla,J., Lacher,D.W., Mammel,M.K., Barnaba,T., Tartera,C.,
            Gebru,S., Patel,I.R., Leonard,S.R., Lampel,K.A. and Elkins,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-SEP-2017) CFSAN-ORS-DM-MMSB, US Food and Drug
            Administration, 5100 Paint Branch Parkway, College Park, MD 20740,
            USA
COMMENT     ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.8.2
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 45.5x
            Sequencing Technology  :: Illumina NextSeq 500
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..3685
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /submitter_seqid="MOD1-EC6212_69_length_3685_cov_51.24"
                     /strain="MOD1-EC6212"
                     /isolation_source="feces"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Singapore"
                     /collection_date="1999-06-10"
                     /collected_by="FDA"
ORIGIN      
        1 gagccatgat caaactcttc aatttaaaag tttgatgctc aaagaattaa acttcgtaat
       61 gaattacgtg ttcactcctg agacttggta ttcatttttc gtcttgcgac gtcaagaatc
      121 cgtatcttcg agtgcccaca cagattgtct gataaattgt taaagagcag tgccgcttcg
      181 ctttttctca acggcgcggg gtgtgcataa tacgctttcc cgctacagag tcaagcattt
      241 attttgcttt ccctgccgaa attctcagga gaaccccgct gacccggcgg cgtgtttgcc
      301 gttgttccgt gtcagtggtg gcgcattata gggagttatt ccggcctgac aagaggaaat
      361 ttaaaataat tttctgatcg cgcatttttt cagcaaaagc cccgttaatg tgccataaaa
      421 caagcaattt gccgtttttg caaccgtaat cacacttcct ggtggcatac taagaaggaa
      481 taaaaagaaa aaggaagatt agtaatgcct ttaagcgcac aacagttagc tgcacagaaa
      541 aacctttcgt atgttctggc tgagaagctg gcgcagcgga tcttaaaagg tgaatatgaa
      601 cccggcacca ttttgcctgg tgagattgag ctgggcgagc aatttggagt gagtcgtaca
      661 gcggtacgcg aagcggtcaa aacgttaacg gcaaaaggga tggttttacc gcgaccgcga
      721 attggtaccc gagtcatgcc acaatcgaac tggaattttc ttgatcagga attgcttacc
      781 tggtggatga cagaagagaa ctttcatcag gtcatcgatc actttctggt tatgcgtatc
      841 tgtctggagc cgcaagcttg cctactggca gcaaaggttg gcaccgcgga acagaaggcg
      901 catctcaata cgttaatggc cgaaatggcg gcattaaaag agaactttcg ccgtgaacgc
      961 tggatcgaag tcgatatggc ctggcatgag catatctatg aaatgagcgc caatccgttt
     1021 ttgacctcat tcgcctcgct attccattcg gtttatcaca cttacttcac gtcaattacc
     1081 agcgacacag tgataaagct ggatctgcac caggcgattg tcgatgcgat tatccaaagc
     1141 gatggcgacg cggcatttaa agcttgtcag gcgctgctac gctcaccaga taagtgataa
     1201 cccgataaca ggacattgaa tgagcgataa aaagaagcgc agtatggcgg gtttgccgtg
     1261 gatcgcggcg atggccttct tcatgcaggc acttgatgcc actattctga ataccgcctt
     1321 acccgcaatc gctcatagcc ttaatcgttc tcctctcgcg atgcaatcag ccatcatcag
     1381 ttatacgctg acggtggcga tgcttattcc ggtaagcgga tggctagccg atcgcttcgg
     1441 tacgcgtcgc atatttaccc ttgccgtgag tctgttcacg ttgggttctc tggcctgcgc
     1501 actttctaac tcgctaccac agctggttgt cttccgggtt attcagggga taggcggcgc
     1561 aatgatgatg cctgttgctc ggctggcctt actgcgcgct tatcctcgta atgagcttct
     1621 tcctgtattg aattttgtcg ccatgccggg tctggtgggg ccaattttag gccccgttct
     1681 tggcggcgtg ctggtcacct gggcaacctg gcactggata tttttaatca atatccccat
     1741 aggtattgcg ggccttcttt acgcgcacaa acatatgccc aatttcacca ccgcacgacg
     1801 cagattcgat accactggct ttttgctgtt tggcctcagc cttgttctct tctcaagcgg
     1861 aatagagcta ttcggggaaa agattgtcgc cagctggatt gccttgacgg taattgtcac
     1921 cagcatcggg ttactgcttc tctatattct ccatgcgcga cgcacgccaa acccattaat
     1981 ttcattagat ttatttaaaa cccgcacttt ctcgatcggt atcgtaggca atattgcaac
     2041 ccgtctgggg accggctgtg taccgttcct tatgccattg atgttacagg taggatttgg
     2101 gtatcaggcg tttattgctg gctgtatgat ggcaccgaca gcgttaggtt ccattattgc
     2161 aaaatcgatg gttacccaag tcttacgtcg tctgggctat cgccatacgt tagtggggat
     2221 cacggtgatt atagggctaa tgatcgctca gttctctttg caatcaccag caatggcgat
     2281 atggatgctg atcttgccgt tgtttatatt agggatggct atgtcgacac aatttaccgc
     2341 gatgaatacc atcacacttg ccgatctgac cgatgacaac gccagcagcg gtaacagtgt
     2401 tctggcggtc acgcagcaac tgtcgatcag tttaggcgtt gctgtaagtg cggcagtcct
     2461 tcgcgtttac gaagggatgg aaggcacaac gacagtcgaa caattccact atacgtttat
     2521 cacgatgggc attattactg ttgcttcagc agcaatgttc atgctactga aaacaaccga
     2581 tggtaataat ttgatcaaaa gacagcgtaa atctaagccg aaccacgttc catcagaatc
     2641 ggagtaagtt gtaatcgttg ttgctgtagg gtcggctggg ttatccgatg gatgagtaca
     2701 tcaatcgcca gctcccccag ttcatctttc ggttggtgta tagttgttaa tggtggcgtc
     2761 ataaagcttg ccagttcgat atcgtcatag ccaatcaccg cgatatcctg cggaacctgt
     2821 aactctgcct gatataacgc ctggtaaacg ccaacagcca tagcgtcatt tccggtaaag
     2881 acggcctgag gacgcagcgg atgtgataac agttggcgca tagcgtcaaa cccgccgtta
     2941 aattcaaaat caccagtgac ttcatagcca tcaggaatgt tgagacccgc acgtttcatc
     3001 gccgcccgat aaccttccaa ccgcaggcgc gccggagttt tatccagcgg accggtaata
     3061 caggcaatac gggtatgacc tttatcgatc agatattgcg ttgctaagtc tccgcccagc
     3121 aacgagttat cctgaataag atcgctgtcg ccatcgaacg gagcccagtc catcatcacg
     3181 gtaggcactg tcggataacg ttgcatgatt tcacgcgaag gctgatgcgt ttcggtgcac
     3241 agtaacagca agccatcaac gcgtttttgc atcagcgttt ccagattacg attcatccgc
     3301 tgttcatcgc cttcggtatt gcaaaggaca agactataac cgcgttcgaa gcagctgcgt
     3361 tcaacgccac gcaccagttc tgaatagaaa ggattggtac tggcagtgat caacatgcca
     3421 atggtatgtg tttgattgag tttgaggcta cgcgccagag ctgatggcgc gtaattgagt
     3481 tctttaatcg ccgcttcaac tttggctgta atcgcttcac tgacgaagcg atctttattg
     3541 ataacgtgag aaactgttga ggtagaaacg cccgccaggc gggcaacatc tttcattgta
     3601 gccaagcgct gatgaatccc ctaatgattt ttatcaaaat cattaagtta aggtagatac
     3661 acatcttgtc atatgatcaa atggt
//
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