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NCBI Reference Sequence: XR_007063045.1
FASTA Graphics
LOCUS XR_007063045 11018 bp RNA linear PRI 25-AUG-2024 DEFINITION PREDICTED: Homo sapiens solute carrier family 15 member 4 (SLC15A4), transcript variant X4, misc_RNA. ACCESSION XR_007063045 VERSION XR_007063045.1 DBLINK BioProject: PRJNA168 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_000012.12) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_000001405.40-RS_2024_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; RefSeqFE; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/23/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..11018 /organism="Homo sapiens" /mol_type="transcribed RNA" /db_xref="taxon:9606" /chromosome="12" gene 1..11018 /gene="SLC15A4" /gene_synonym="FP12591; PHT1; PTR4" /note="solute carrier family 15 member 4; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 92 long SRA reads, and 83% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns" /db_xref="GeneID:121260" /db_xref="HGNC:HGNC:23090" /db_xref="MIM:615806" misc_RNA 1..11018 /gene="SLC15A4" /gene_synonym="FP12591; PHT1; PTR4" /product="solute carrier family 15 member 4, transcript variant X4" /experiment="COORDINATES: cap analysis [ECO:0007248]" /db_xref="GeneID:121260" /db_xref="HGNC:HGNC:23090" /db_xref="MIM:615806" ORIGIN 1 gtgtgctgca gttaagcctg ttgtccaggg aacagaggcc tagagggtta gctcccaagg 61 ctgcacagca ggtgcctagg ggagctggtt tggggccctg gcagcctgac ttaaaagctg 121 gtgctctcca ggatataaca ggcgagtaat tgatacttct taaaatgagg aggaaatggt 181 gctcggttat ctcagatgaa tctgacagaa tatgcgctct ttcatccata attaaatgtg 241 gatgttgaaa ggagatgtgc cttcttccga aagatagctg gcctgatctc ttccgacgta 301 atgctgtcat gttaaaagag gaccttgtgg atgaaaggct actcgggaga cctggccgcc 361 ccctgcagcg cgtgctgagt gattggatcc cagctgcttt catggccgtt cttcttggat 421 gcttgggata gtttgtagac cgcctattag ctaataatgg accaatgttg cctttcttag 481 gtgtggtaat ttcactgccg ttaaaagaat gtccttattt ccaggagatt catgatgaaa 541 ttttgggggt gaaattggtt gctggagctt atttgtatgt agatcaccca gaagtatttt 601 tttttaagac caagtcttat tctcttgtcc aggctggggt gcagcggtat gatctcagct 661 cactgcaacc tctgcctcct ggttcaagct attttcctgc ctcagcctcc tgagtagctg 721 ggactacagg tgtgagccac cacgcctggc taatttttgt atttttaata gagacggggt 781 ttcaccatgt tggccaggtt ggtctcgaac tcctgacctc aggtgatcca cctgcctcgg 841 cctcccaaag ttctgggatt acaggcgtga gccaccgcgc tcggccagta ttttttatgt 901 atagaaaaaa gtgctgaggc tccaagtgaa gggtagagag gtgtgcattt tgcaattcaa 961 cttttctata catttggaat ttttttaaat gaaagataag aaaatgttca ctgatgaatg 1021 tataaactaa atatagtata tccatacaat ggcatatttt tcagccatta aaaaagaaat 1081 gaagtactga tgagccttga aaacattcgg ctgcatgaag gaagccagac acataaggcc 1141 ccagttgtgt gattccattg atgtggaatg cccggaagag gcgagtccac agagactgga 1201 agtagattaa gggttgccac gggccaggag aggggcgtgg gactgactta aagggaacag 1261 gagttcctgt tggtgtgatg agaatgtgga cttggatggc agtgatggct gtacatctct 1321 gaatatacta gacactactg aattgtacac ttttgaaggg tgaattttat ggtatgtgaa 1381 tcatagtgaa aaaacatttg aagggaaaag tacccttatg ccagggtgct tgcccgtgac 1441 caggtggcag gtccccctcc aggtgcggct gcttcatggc aggaggcctg gctggggacc 1501 ctgaggtgtg caggcctgaa gtacactctg ttgtgcccca ggcgagggtt aatttgtcct 1561 ggtttggtcc ttttcattta gaggaaacct gtttgtattt ttaaggtgct ttttatggtt 1621 ctttgtcact tacctcttca tctcccaggt agagcctctg ggaaacattc tgataggaga 1681 gacaatgggg tgaggctgca tagctttgag aaggaggcct agttggcttc tgaaagagga 1741 tgtgtgagct gtgagtccaa gggagacgta tgttcgtgta aatcatgtca ggccgtatct 1801 tcccccagtg tttcaccttt ttcaaaggtc acaatcgttc ttggtggatg gattatttga 1861 aatagtgacc tgaaagacga aaatcttatg ttacagatga aaagagcaaa tgatgcattt 1921 tttttttttc tagaggaaaa actgacaccc cattttaagg aattcttctg tcagccaact 1981 gtttggtatg ctgtacacaa ttctattctt ttagcttttc ttctccaaat tgattttggt 2041 ggtatctttt ggccagtcat gtgaaaacct tgtttaccct tggtagggca cgtagctgca 2101 gctcacacag tgatgtcatg caaacgatgg gcaggaggtt gtggcctgct cgccaggggc 2161 tgggaagcat gtgatgtccc ttcacagcag ccaggttccc ttggtacaga aatgcctgct 2221 gtgtggttat ttagggctta gtaattttgg cttataaagt aattttgatg gattactctt 2281 ggagttggaa taaattgacc accacaatta cacaggaaat gaggatgaat ggcattttaa 2341 ggttaggatt ttcccagagt aatcaaatgc tgatattttc atgcttcatc tgaagaggac 2401 ataagtctga gactgtggga agatatgtgc agtgtcactg tgggtaacgg gaaggcccga 2461 gtgagaccgt gggaaggtgt gtgcagtgtc actgtgggta atgggaaggt ccgagtacat 2521 ttcagttagg aaatcatttg tgcctctatt aagtttatat actatgttta ctggcctctt 2581 ttatgcttgt caaaaaatta ctttttgttt gttatttttt cgcacttcta gttttgtttt 2641 ctcagtaacc atttctctgc tcacattttt catttttctt cctggtccat gtctagtata 2701 gcatgagaat tggtgtccac tgttgagcaa tatttaaatg cattgtgtcc tagtgaagaa 2761 gtgtcttaga tgtctgtgaa gttctcacct caaactcttt attcagtaga gatgtctgca 2821 tttggtctag gacctctgtt cagtattgta atagataaga gaaaagttta aactcttgag 2881 aataagtgat tttcttttaa atttagattt ttcgtttgaa gtggtgttac tatatataat 2941 taattacctg ccaccatagt ggccatgctt aatcatttgg acttcaaaca aatctctttt 3001 tgaggagcac acaatttttt ttcttttgct ctatttcctt tagagaggaa cacacaattt 3061 taactataaa ttttactcct ctgatttaat ctttaaaaaa tagagtttaa aataccatat 3121 caaatatatg actgctaaaa agatgcatgt gcttattaca taccatatct ttttttttct 3181 tttgagacag ggcctctgtc gcttaggcag gagtgcagtg gtgccatcac agctcactgc 3241 cacctcctcc ccagttcaag ggatcctccc acctcagtct cgcaggtagc tgggactgta 3301 ggcgcacacc accgcacctg gctgatgttt gtaatttttt gtagagatgg gggtctgtct 3361 gtgttcccag gctgctctca aactcctaga cccaagcggt ctgcctgccc tggcttccca 3421 aagtgctggg attccagacc tgagccacca tgcccaaccg taattggttg ttttggcccc 3481 attgagaatg tgttattcag tagagcagat tgttctatgg atccagaaac tagatctatt 3541 attagaataa gaattttcta actctttcat aacctgtgac ttaagaatga gacagtagaa 3601 gtttttaaga cagcaagaga gtctttttat gagatccagt atcagcctct cataagtttg 3661 ttaaaaataa atttatgaaa tgaaactcac tagaaatgtc tctgtctagt acagggttca 3721 tttgcacagt atcttattta gacgtaaaaa tccaggtggg cagagaaggc ttctggtgtg 3781 tctgccccca aatgacctgt tcccaccgct tgggctccat tgaagtagcc tcgtgaactc 3841 cataagccta gatgttgcgt tattacctca gtgcttttgt ttgagtccag gaagtcagtg 3901 atttttgagc cttttggaaa tcccaccctt atcagaattt ctccgattcc attgatagcc 3961 tgtctaatct aaaaatagca tgtggtttta tctttagtct ataatttcct ctttgcttca 4021 agtttactga gatctctgat tctcaggaga ccagatacaa ttggtgtggg tggtgacttg 4081 gcctcactga acaaatgtct ctctttgggg cctaagcata tttgtggggt gcctcatggt 4141 acttgcatgt agctcagtaa ggcatggagc tttataacat tggttctaaa acttacctgt 4201 gagtagaagt cacctgggaa gttgcttgaa atgcagattc ctgggcctgg gccccagaga 4261 ccgtgattca gtaggtctgg agcgtgggtc ctgtgactgt gtttgttttt tgtttgtttg 4321 tttgtttgag atggagtttc actcttgtca accaggtaca gtggcacagt ctcggttcac 4381 tgcaacctcc atgtcctgga ttcaagcgat tctcctgcct cagcctccca agtagctggg 4441 attacaggtg cccaccacca tgcctggcta atttttgtat ttttagtaga gacggtgttt 4501 caccatgttg gccaggctgg tctcgaactc catacctcaa gtgatccaca cgcctcagcc 4561 tcccaaagtg ctaggattat aggcgtgagc caccatgccc agcggactct gtttttaaag 4621 agcattccag gttaaagatc gaggtccgga agccactagg agatttttta attggtttta 4681 ttggagcatt aacctgggag cgatcctgtc gttaggtggc attgcctata ttcagcagaa 4741 cgtcagcttt gtcactggtt atgcgatccc cactgtctgc gtcggccttg cttttgtggt 4801 cttcctctgt ggccagagcg ttttcatcac caagcctcct gatggcagtg ccttcaccga 4861 catgttcaag atactgacgt attcctgctg ttcccagaag cgaagtggag agcgccagag 4921 taatggtgaa ggcattggag tctttcagca atcttctaaa caaagtctgt ttgattcatg 4981 taagatgtct catggtgggc catttacaga agagaaagtg gaagatgtga aagctctggt 5041 caagattgtc cctgttttct tggctttgat accttactgg acagtgtatt tccaaatgca 5101 gacaacatat gttttacaga gtcttcattt gaggattcca gaaatttcaa atattacaac 5161 cactcctcac acgctccctg cagcctggct gaccatgttt gatgctgtgc tcatcctcct 5221 gctcatccct ctgaaggaca aactggtcga tcccattttg agaagacatg gcctgctccc 5281 atcctccctg aagaggatcg ccgtgggcat gttctttgtc atgtgctcgg cctttgctgc 5341 aggaattttg gagagtaaaa ggctgaacct tgttaaagag aaaaccatta atcagaccat 5401 cggcaacgtc gtctaccatg ctgccgatct gtcgctgtgg tggcaggtgc cgcagtactt 5461 gctgattggg atcagcgaga tctttgcaag tatcgcaggc ctggaatttg catactcagc 5521 tgcccccaag tccatgcaga gtgccataat gggcttgttc tttttcttct ctggcgtcgg 5581 gtcgttcgtg ggttctggac tgctggcact ggtgtctatc aaagccatcg gatggatgag 5641 cagtcacaca gactttggag acaagcaggc ctctcttctc atcccagggg ccaagcctgc 5701 cctggccaca gcccagcgag cagctgctgc agccaccgct ccttacgggg acgtccttga 5761 cagacaagca ccttctccac gcccgtccag ctcagtcttc gtgaggcagc tgaatctgta 5821 ccccaagctt ccctttcttt aacttggtgg tgtactttcg ttttcttttc ctaacagcac 5881 cttttctgat acgaaaaaga caagatagat agtaagttac ttttaaaaat aaacatatta 5941 cttgtgatca atcataatgg gtttttacaa ttaataccag taggtggcat cttgagtgtt 6001 gaacagaacc actcataaaa gctgagtttt gctttctcca ggtttacgat gcctttaaat 6061 ggacccagca agcgaaggtt tcttctttct tttcctttgt aaaaatattt tatctacaga 6121 aacaaccttg ttactttttc ttgtataatc atgtggcatt tgctctggtc cggtagtact 6181 tagccacttt taggttacaa atccccttga gaatctggtg aacgtttagg gacttttctg 6241 cagaaattgc agaattccca gagcccttcc atgagtatag gcctgtggag tcctaatgta 6301 aagcccagaa ctccaagcca ccaatgtccc atggacactt gtcactgatg ttttctggct 6361 gtgggtgcca cctccatggc cagctcaggg ctgcttgctc tgaggaggac atgtggattt 6421 ggggctggtg tttcattccc accttctcct gaagatgaac agcccgagga ataagatcct 6481 cttgtggtac atgggacaga cttccttcaa agaaagacca aagtccatag ttctgaagac 6541 gaagattctg gttcttggtt tttgttttat ctttaaatgt gtcataaagg attggctggt 6601 cattctcgtt gctttctagt catttaatcc tcattcttaa tttaatttca catctcagag 6661 ttgacctttc attcatcatt tctgtctgac aggttgtttg tggacttccc ctgcattggt 6721 gctctcaggg cgtgtgtgct ggggatgggc caggatctgt ctgttgtttt caagaatggg 6781 aaatgtttca tgaaggaggc gtgtttgcca gcagccccca ggctgtgccc cctggctgca 6841 tggcagcctc cttggttcac accagtaagg agagttggag ctcatctgtc gagcagccct 6901 tggcgtcctg ggtagagaaa taaaggctgt gacatgggaa atccacagga agcccgctcc 6961 tcagagagag ttctccctga atttgtgtgg ccttggaagg agcagcagct ctcaggccag 7021 gttccggggg tgtctgtgcc acccttatcc ctggccctac ctcaccatct cgtgaccgac 7081 acaggaaata gctttctgta aagtcacagc actgtgaagg gagagtcccc agagttttgt 7141 tacattgtgt ttttcttacc gacctcccag caggctcctt ttattagtgt tatttaagct 7201 ggggagaacg tgcataccat agtaaaggtc tctaatctta agcacagctt gctgtgtttg 7261 cagtctggat ctcagtggag gaacttttgg aagccctcct tgcctctctc cttagtttac 7321 tgcccccctc agaaggtaaa cctgttctat tccagcgttg gtccccacag gttaccctcg 7381 cctgtcctgt gctgggctgt ggctgtctcc tttcacttag cacttctgtc tgtgagcatc 7441 tcccctgtac ttctgagtac tgctccttcg tacgagccgt cacgaggcat ttatccatgc 7501 tgttgtcggt gggtgcccag atgttggcag tgtggggctg ttgtgaatac ctgccctgcc 7561 tgtgagcctg gggggcgggt gcgctcattc cttggggacc caagagtctg tcttgtcaaa 7621 tgtcaaaacc ctagtgtttg ccatcttcct gtgtaattat ccttctgtct gtgaagaggc 7681 ccaggaatgc acggcaggtt ttctcccagg cgacttaggc gtttccgaat accctgtgta 7741 atgccaccct gagacagacc ctgacgaggc gtggtgtgtc tgcctgcggg cttggaccgc 7801 acctccactc ccgcagggcc gcgcagcctt cagttcatgt ggcctcagcc ttcagttcac 7861 gtggcctgcc agctttagct cgggaagttt tcagtgactg gtacatttgg ggagactcgt 7921 atttcaaaat aggcacataa aatgatgtcg tttatatttt gatgacaacc tcgtctcagt 7981 agcgtcaaat gccagtgttg ggacagcagt gacagctagt gccaggctcc aggaagctgg 8041 ggtttgcatt tccactgagt gcccaggaca gagcctggta ggtcgtaagg gttgaacgaa 8101 tagtgtaaaa catctgttga aaaaataaag ctttagtctg gtagaattca gggtattagc 8161 agctgtcttt ctaaatcagt agacacagga aatgatcttc tttaattggt gtgaatgagc 8221 actctttaaa aatgtgtgag atctcaccat acagatgtgt gggttttttt tttttttttt 8281 tttttttttt ttgagatgga gtttcacgtt tgttgcccgg gctggagtgc agtggtacca 8341 tcttggctca ctgcagcctt tcacctcccg ggttcaagtg acaattctct ggcctcagcc 8401 tcccaagcag ctgagattac aggcgccagc caccacgcct ggctaattat ttgtattttt 8461 agtagagacg gggtttcatc gtgttggcca ggctgattct gaattcctga cctcagttga 8521 tcacccacct tggcctccca aagtgctggg attacagtca taagccactg cgcctggccc 8581 agacgtgtat tatattgtgt ttatttgata aatgcactgt tgaacatgca gtatatgttc 8641 agatagaaaa aggaagtgcc agaataaccc agctttaaaa aggtcttcag aagaaaggaa 8701 gtctcacttt ttaaaataaa caaatgagaa agtgtttttg aagaggagca gaaaatggag 8761 caacttgatt ccagagcact cgctcccctc gtgatgttgc cggccacacg cacctgcgac 8821 ctcgtgcaga aacgtgcagc agtgctttcc agctggtggc aggtgatgta catggtacgg 8881 agacagaggg acgccatggt ggcaggagca gccgtggtgg agagcacagg gcgacactcg 8941 gcttggcctg gatgaccagt catgacgagc taaaagtcct gccgttttct gctcacacgt 9001 cgttcccacg tctgcacatt gagtggtgat gttagccggt gctggctgaa ctctgttctc 9061 tggcggagag actgccagtt tgcagagtgg acagttccag acctctgtga aagggggatc 9121 atgaccgtgg cacgtgttgc tagcaccctc accgcgtcca gactccctct tgagtgcctt 9181 tctgaaatgc tgctcctcgg cgctttcccc attttacaga tgaggaaact gagcacagag 9241 gtctcagagg ccggattcaa gccttatagc ttgagctgca tggcccatga tcttatcctc 9301 tgtgctgtcc agcctgcttg ggatgcagac gttgcgtgta aagtgcctcc atagtgcccg 9361 ggactcggtt gggtattcag tgtatgctaa ctctttgtat taaagtatgc agaggtatct 9421 gcttgtgtca gtttgaggat gctaaaacct gaacatgttt aagacacatt cagaaaccag 9481 ctcatctctt cctttgatac attgcccagc tgtcggccct ggtgtgttgg gtgtgtcagt 9541 gacccatgca gtgaatccag aattcacgat gttcaggctg tgtcatagtg caatctgtga 9601 tgctaaaaag tgcacaggtt ccatagccaa gttacaaaga cgctcacctc aggattcgat 9661 aaagagatag tcaggcgctc ttttgttatc ttcgcatctg ccttcctcaa caatgcagtt 9721 ccaggccaat cataactata aatggaggaa gttcccctga agtagttgag gagaggaaca 9781 ctgcctcaga aaaggcagga aggaaataac accagaccgg ctaacacttg tttctggtgg 9841 caagaacaca ggaaggtaat attaacggct gctatttgaa ctattacttt tttcttctgg 9901 ctgctattca aggagctacc ctcctgcttt tcctcattat ttctgtgaaa tatgaccatc 9961 atcgagacca tcagcgatca agagccaatg gcgtgcccac cagcaggagg gcctgacctt 10021 cctgaggcca tgtgcggttt ctgaggctga catgtcagta actgactggg gtgcactgag 10081 aacaggcaag actttaaatt cccataaaat gtctgacttc actgaaactt gcatgttgcc 10141 tggattgatt tcttctttcc ctctatccaa aggagcttgg taagtgcctt actgcagcgt 10201 gtctcctggc acgctgggcc ctccgggagg agagctgcag atttcgagta tgtcgcttgt 10261 cattcaaggt ctctgtgaat cctctagctg ggttcccttt tttacagaaa ctcacaaatg 10321 gagattgcaa agtcttgggg aactccacgt gttagttggc atcccagttt cttaaacaaa 10381 tagtatcacc tgcttcccat agccatatct cactgtaaaa aaaaaattaa taaactgtta 10441 cttatattta agaaagtgag gatttttttt tttttaaaga taaaagcatg gtcagatgct 10501 gcaaggattt tacataaatg ccatatttat ggtttccttc ctgagaacaa tcttgctctt 10561 gccatgttct ttgatttagg ctggtagtaa acacatttca tctgctgctt caaaaagtac 10621 ttacttttta aaccatcaac attacttttc tttcttaagg caaggcatgc ataagagtca 10681 tttgagacca tgtgtcccat ctcaagccac agagcaactc acggggtact tcacacctta 10741 cctagtcaga gtgcttatat atagctttat tttggtacga ttgagactaa agactgatca 10801 tggttgtatg taaggaaaac attcttttga acagaaatag tgtaattaaa aataattgaa 10861 agtgttaaat gtgaacttga gctgtttgac cagtcacatt tttgtattgt tactgtacgt 10921 gtatctgggg cttctccgtt tgttaatact ttttctgtat ttgttgctgt atttttggca 10981 taactttatt ataaaaagca tctcaaatgc gaaatcca //
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