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NCBI Reference Sequence: XM_577054.6
FASTA Graphics
LOCUS XM_577054 662 bp mRNA linear ROD 26-JUL-2016 DEFINITION PREDICTED: Rattus norvegicus vacuolar ATPase assembly integral membrane protein Vma21 (LOC103689964), transcript variant X2, mRNA. ACCESSION XM_577054 VERSION XM_577054.6 DBLINK BioProject: PRJNA12455 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_005116.4) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Aug 7, 2014 this sequence version replaced XM_577054.5. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Rattus norvegicus Annotation Release 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..662 /organism="Rattus norvegicus" /mol_type="mRNA" /strain="mixed" /db_xref="taxon:10116" /chromosome="17" /sex="pooled males and females" /note="pooled female animals of strain BN/SsNHsdMCW plus one male of strain SHR (also known as SHR-Akr)" gene 1..662 /gene="LOC103689964" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 305 samples with support for all annotated introns" /db_xref="GeneID:103689964" /db_xref="RGD:9321656" CDS 131..436 /gene="LOC103689964" /codon_start=1 /product="vacuolar ATPase assembly integral membrane protein Vma21 isoform X2" /protein_id="XP_577054.2" /db_xref="GeneID:103689964" /db_xref="RGD:9321656" /translation="MERLDKAALNALQPPEFRNENSLAATLKTLLFFTALMITVPIGL YFTTKSYIFEGALGMSNRDSYFYAAIVAVVAVHVVLALFVYVAWNEGSRQWREGKQD" ORIGIN 1 tacgtcgcgc caccgggagc gtgtttcagc cggggcactt ccggcgcgac cggcctagta 61 ctgcaccctc ctagcggccg ctgcgccccg ctaattacct agcacctgct gttgccctcc 121 cggccacgcc atggagcgtc ttgataaagc ggcactgaac gcgctgcagc ctccagagtt 181 cagaaatgaa aactctttag ctgcgaccct gaagacactc ctgttcttca cggctttaat 241 gatcacagtt cctatcgggt tgtattttac aactaaatct tatatatttg aaggtgccct 301 tggaatgtcc aatagagaca gctattttta tgctgcaatt gttgctgttg ttgctgttca 361 tgtggttctg gccctgtttg tctatgtggc ctggaatgaa ggctcacgac agtggcgtga 421 aggcaaacag gattaaagcg aacatcacct tttgatagca tgaaatttat tttttgaata 481 tgttaaataa ttgtgggata ttgataataa atacattcat ttgaataaaa ttaaaagaac 541 atggtaaaat caagtcttaa agagtcagtc gcatttggct aaattttgac ccacccaata 601 atatggttac tttgaacttt gaatctccat ttgcaaatga aaatttggga aagttggata 661 gg //
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