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PREDICTED: Danio rerio preproinsulin b (insb), transcript variant X2, mRNA

NCBI Reference Sequence: XM_068213231.1

FASTA Graphics 

LOCUS       XM_068213231             988 bp    mRNA    linear   VRT 08-SEP-2024
DEFINITION  PREDICTED: Danio rerio preproinsulin b (insb), transcript variant
            X2, mRNA.
ACCESSION   XM_068213231
VERSION     XM_068213231.1
DBLINK      BioProject: PRJNA13922
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_007125.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_000002035.6-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/15/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /strain="Tuebingen"
                     /db_xref="taxon:7955"
                     /chromosome="14"
     gene            1..988
                     /gene="insb"
                     /note="preproinsulin b; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 4 mRNAs, 6 ESTs, 6 long
                     SRA reads, 8 Proteins, and 96% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:566735"
                     /db_xref="ZFIN:ZDB-GENE-040113-2"
     misc_feature    1
                     /gene="insb"
                     /experiment="COORDINATES: cap analysis [ECO:0007248]"
                     /note="transcription start site"
     CDS             373..852
                     /gene="insb"
                     /codon_start=1
                     /product="preproinsulin b isoform X1"
                     /protein_id="XP_068069332.1"
                     /db_xref="GeneID:566735"
                     /db_xref="ZFIN:ZDB-GENE-040113-2"
                     /translation="MGTFVFPLMPSRAMGQAAGRYISSTIQAQSWPLFTDSAHSGKGC
                     ACPQSVSTMVLLLQASVLILLLASLPGSQSSPSQHLCGSSLVDALYLVCGPRGFFYTN
                     RGRRDLETLLALLSNLAGYEAADADPLKEKVMKMKRGIVEQCCHRPCTIYHLEDYCS"
     polyA_site      988
                     /gene="insb"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agatgaagag aattgaaaga atgttatatt acctcagggg gtcccgttag accggtcatc
       61 tgcgtgtccc tgtttgagca aacttaaaag gtaaagatgc tgatgctctt cagctttaac
      121 ttcacacttt ttccccagga gtgagggctt tttctgcagg cctcgtgccg cttcacacac
      181 ctccgagccc tgactccaca tcctttcaaa atccacactt tcatcacatt tccaacactt
      241 cggagagata cttcctgctt tctttcgtcc acaaggaccc gccggattac aaacactcgg
      301 cgcggcacct cacctcagga aatgttagga ggaacaggtg tggctgttgg tgaataggat
      361 gtatattcga acatgggaac ttttgttttt ccgctgatgc catcaagagc aatgggccag
      421 gcagcaggaa ggtatataag cagcacaatt caggcccaat cctggccact cttcacagac
      481 tctgctcact caggaaaagg gtgtgcatgt cctcagtctg tgtccaccat ggtcctgttg
      541 ctgcaggcgt cagtattaat cctgctgctg gcgtctctgc ctggatcgca gtcttctcca
      601 tcccagcatc tgtgtggttc aagcctggtg gatgcgcttt acctagtgtg tgggcctaga
      661 ggtttcttct acaccaacag aggcaggaga gacctggaga ccttgctggc tttgctctca
      721 aatttagcag gttatgaggc agcagatgcg gatccgctga aagagaaggt gatgaagatg
      781 aagaggggga ttgtggagca atgctgccac aggccctgca ccatctacca cctggaggac
      841 tactgcagct gaacagccag cgcaatgcat gttcagctta gcaataaatg accattacac
      901 gcaagaaaag tcattgtttg cttgacattt caaatggaag cttgtagtaa agatccaccg
      961 aaagcaacaa taaataaatt gactgaaa
//
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