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NCBI Reference Sequence: XM_063285454.1
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LOCUS XM_063285454 2796 bp mRNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus zinc finger protein 384 (Zfp384), transcript variant X14, mRNA. ACCESSION XM_063285454 VERSION XM_063285454.1 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_086022) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_036323735.1-RS_2024_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/09/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2796 /organism="Rattus norvegicus" /mol_type="mRNA" /strain="BN/NHsdMcwi" /bio_material="RGD 61498" /db_xref="taxon:10116" /chromosome="4" /sex="male" /tissue_type="kidney, spleen, liver" /geo_loc_name="USA: Wisconsin, Milwaukee" /lat_lon="43.05 N 88.04 W" /collected_by="Rebecca Schilling, Melinda Dwinell" gene 1..2796 /gene="Zfp384" /gene_synonym="Ciz; Nmp4; Znf384" /note="zinc finger protein 384; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 109 long SRA reads, 4 Proteins" /db_xref="GeneID:171018" /db_xref="RGD:708346" CDS 325..1887 /gene="Zfp384" /gene_synonym="Ciz; Nmp4; Znf384" /codon_start=1 /product="zinc finger protein 384 isoform X7" /protein_id="XP_063141524.1" /db_xref="GeneID:171018" /db_xref="RGD:708346" /translation="MEESHFNSNPYFWPSIPTVSGQIENTMFINKMKDQLLPEKGCGL APPHYPTLLTVPASVSLSSGISMDTESKSEQLTPHSQASVTQNITVVPVPSTGLMTAG VSCSQRWRREGSQSRGPGLVITSPSGSLVTTASSAQTFPISTPMIVSALPPGSQALQV VPDLSKKVASTLTEEGGGGGGGGGTVAPPKPPRGRKKKRMLESGLPEMNDPYVLAPGD DDDHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPHKCPHCSKTFANSSYLAQHI RIHSGAKPYSCNFCEKSFRQLSHLQQHTRIHTGDRPYKCAHPGCEKAFTQLSNLQSHR RQHNKDKPFKCHNCHRAYTDAASLEAHLSTHTVKHAKVYTCTICSRAYTSETYLMKHM RKHNPPDLQQQVQAAAAAAAVAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQASQASQQ QQQQQPPPPQPPHFQSPGAAPQGGGGGDSNQNPPPQCSFDLTPYKPAEHHKDICLTVT TSTIQVEHLASS" polyA_site 2796 /gene="Zfp384" /gene_synonym="Ciz; Nmp4; Znf384" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 acttccgggt gagtgttcag gagggcgggg ggcctatacg ctgcctcgcg cccccgccct 61 gcgggtgtgt agcgcgtagc ccgtgcgagt gtaggggtct gtctcgcgcc tgcagtgcat 121 gcccgcgcgc ccggcctcgc gtcccctgtc ccgcgccctg cgagccctcc cactccctcg 181 gctccttcct ttcccagtga acgccgcccc tcccgcgcgc tggctctggc gctggcgccg 241 gcgccgtcgc cgccgcctga aagttcagga gccctggaaa ggagaaggaa taagacgaca 301 ggaggaagag agagagaggg gagaatggaa gagtctcact tcaattctaa cccgtacttc 361 tggccttcta tccccacggt ctcagggcag attgaaaaca ctatgttcat caacaagatg 421 aaggatcagc tgttgccaga gaagggctgt ggactggcac cacctcacta tcccactttg 481 ctgacagtgc ctgcctcagt gtccctgtcc tctggcatca gcatggacac agagtccaag 541 tcagaacagc tgaccccaca cagtcaggca tctgttaccc agaacatcac agtggtccct 601 gtaccatcta caggactcat gactgcggga gtctcctgtt ctcagaggtg gagaagagaa 661 gggagtcaat caaggggtcc tggtttggta atcacatccc cttcaggctc tcttgtgacc 721 acagcctcat cagctcagac tttccctatc tcgactccca tgattgtctc agctcttccc 781 cctggctcac aagccctaca ggtggtccct gacctctcca agaaggtagc atcaacccta 841 actgaggaag gaggcggagg tggtggtgga ggtggcactg tggctcctcc taaacctcct 901 cggggccgca agaagaagcg gatgctggaa tcagggcttc ctgagatgaa tgacccttac 961 gtccttgccc ctggggatga cgatgaccat cagaaagatg gcaagaccta caggtgccgg 1021 atgtgctcac tgaccttcta ctcaaagtcg gagatgcaga tccactccaa gtcacacacc 1081 gagaccaagc cccacaagtg cccacactgc tccaagacct tcgccaacag ctcctacctg 1141 gcccagcaca tccgtatcca ttcaggggcc aagccctata gttgtaactt ttgtgagaaa 1201 tccttccgtc agctctcaca cctgcagcag cacacccgaa tccacactgg cgatagacca 1261 tacaaatgtg cacacccggg ctgcgagaag gctttcacac aactctccaa cctgcagtct 1321 cacagacggc agcacaacaa agataaaccc ttcaagtgcc acaactgtca ccgagcatac 1381 acagacgcag cctcactaga ggctcattta tctacacaca cagtgaagca cgccaaggtt 1441 tatacctgca caatctgtag tcgggcatat acatcagaaa catatcttat gaaacatatg 1501 cgcaaacaca accctcctga tctccaacaa caagtgcaag cggcggcagc ggcagcggca 1561 gtggcccagg ctcaggccca ggctcaggct caggcccagg cccaggctca ggcccaggcc 1621 caggcccagg ctcaggctca ggcccaggcc caagcttcac aggcatcaca gcagcagcaa 1681 cagcagcagc caccacctcc acaaccacca cacttccagt ctcctggggc agctccccag 1741 ggagggggtg gtggggacag caaccagaac cctccacccc agtgttcctt tgacctgacc 1801 ccctataagc cggcagagca tcataaagac atctgcctca ctgtcaccac cagcaccatc 1861 caggtggaac acctggccag ctcttagaga tccgtactgc catccattgg aaaggggaga 1921 agtcctggtc cctcctttgt caactcttct tggtgggaaa gttctcttct tccttgacaa 1981 gtcctgtctc cagctccttg ggtctcaggc atggcttttc ttcgcaagat aaccatcctt 2041 aatctcagct gctcctgatt ggccaaggaa tcctgagctg atagtgttat ccaacagccc 2101 ccatccaagc agagctttta aaactggggc ttggtgcttg agagaaggat ccgctgtaac 2161 ctcacatctt gtccagtgtg tgggcgatta cctttctctc catcctcaaa gttggggctg 2221 atagaagact agtggctggc cctcccagat aacagagaag gaagctctaa atgtcgccag 2281 ccttccgttc tatgcttacc tgtaaaagaa cagattttgc acgtggcctg atccctgtga 2341 gccattttct tccccttaca tggtctcact tcatattggg tggtgactat acctttttta 2401 tttgtaaggg gggcaatagc tgatacatgg tcaccaaggt gccagagatt ccccaggtga 2461 ccaacggtgg cttaagagtg tgagttacca tttttcctta caacctcctt ccttctctgc 2521 caaccaaggg cctatatact cagtctcact accccagtcc aaggagctct gggagctgtg 2581 taagctgtgt tctctgcgat gccatctggg ctttgcagag aagggagaat tcagggcaca 2641 cacaggactg gacttagcct ccctaggtgc cacggtcaga tgccggacat ggatttatat 2701 ataaatatat atatataaat atatatatat acctgctcat cacggccatc tttgttgtaa 2761 ccatttctgt gtttataaat gcattatctc tgagaa //
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