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PREDICTED: Rattus norvegicus zinc finger protein 455 (Zfp455), transcript variant X4, mRNA

NCBI Reference Sequence: XM_063281439.1

FASTA Graphics 

LOCUS       XM_063281439            5914 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus zinc finger protein 455 (Zfp455),
            transcript variant X4, mRNA.
ACCESSION   XM_063281439
VERSION     XM_063281439.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086020) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5914
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..5914
                     /gene="Zfp455"
                     /gene_synonym="Kzf-2; Kzf2"
                     /note="zinc finger protein 455; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 25 long SRA reads, 2 Proteins"
                     /db_xref="GeneID:286979"
                     /db_xref="RGD:628788"
     CDS             191..1729
                     /gene="Zfp455"
                     /gene_synonym="Kzf-2; Kzf2"
                     /codon_start=1
                     /product="zinc finger protein 455 isoform X1"
                     /protein_id="XP_063137509.1"
                     /db_xref="GeneID:286979"
                     /db_xref="RGD:628788"
                     /translation="MLSFWDVAIDFSPEEWECLEPVQWNLYRDVMLENYSNFVFLGLT
                     FSKPFLVTFLEQGQGPWDMQRQAAAAVHPGIALNDPNCYSKTTNCKSLLIKRRKLHIG
                     EKPYKCEECGKALGSLKTLSIHQRLHTGDKPYKCKECHKAFSTRSALFIHMKNHTDEK
                     THKCEECGRLFYYPSMLKQHQRIHSRVKPYKCQECGKAFTDPSFLKKHQKIHFRKHTY
                     QFKECVKRFSPPIHLQEQIHTGQKPFKCGECFKAFHNHLALRKHQTVHFGEKPYKCEE
                     CGRCYSTSFYLRRHQTIHSKYKSYKCEHCGRCYSSTSCLKRHQTIHSEDNPYKCEECG
                     KYFSSSTCLRTHQTVHSVDNSYKCDECGRYYSSSLSLTRHQIIHSEDNPYKCEECGKR
                     FSCSASLQEHQTIHTGEKPYECENCHKAFRHHSSLRKHKTVHTGEKPYKCEKCGRCFS
                     RHSCLRIHQAIHSDGNPHKCVECGKTFVNVYRLTRHMKVHSREKSYKDLKKCVLIQAL
                     KDIK"
     polyA_site      5914
                     /gene="Zfp455"
                     /gene_synonym="Kzf-2; Kzf2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctcaaagttg gcgggaaagc gtgtgcggct gtccatttct gttgtccgat acatggagac
       61 ctacacataa gtgtgcagct cttactgctc aaagcacttc tagctgccgc acagagagca
      121 tcacagaaaa ccaaaactta ccaaaaatgc agagaactat ggatgatctt gtgatctgac
      181 ccaataggaa atgctgtcct tctgggatgt ggccattgat ttctctccag aagagtggga
      241 atgcctggag cctgttcagt ggaatctgta cagggacgtg atgttagaga attacagcaa
      301 ctttgtgttc ctgggtctaa ctttctctaa gccattcttg gtaacattcc tggagcaagg
      361 acaagggcct tgggatatgc agagacaagc agccgccgct gtgcacccag gaatagctct
      421 caatgatccc aactgttaca gcaagaccac taactgtaaa tcactcctta ttaaacgacg
      481 aaaacttcat ataggggaga aaccctacaa gtgtgaagaa tgtggtaagg cccttggttc
      541 tcttaaaaca ctttctatac accagagact tcatactgga gacaaaccct acaagtgtaa
      601 agagtgtcat aaggccttta gtactcgctc agcacttttt atacacatga aaaatcatac
      661 tgatgaaaaa acccacaagt gtgaagaatg tggcagatta ttttactatc cttcaatgct
      721 gaaacaacat cagagaattc attctagagt gaaaccctac aagtgtcaag aatgtggaaa
      781 agcttttact gatccttcat tccttaagaa gcatcaaaaa attcattttc gaaaacatac
      841 ctaccagttt aaagaatgtg tcaaaagatt ttctcctcct atacaccttc aggaacaaat
      901 ccatactgga cagaaacctt tcaaatgtgg agaatgtttt aaagcctttc ataatcactt
      961 agcccttagg aaacaccaga cagttcattt tggagagaaa ccttataagt gcgaagaatg
     1021 tggccgatgt tattccacat ctttctacct tagaagacat caaacaatcc actctaaata
     1081 caagtcctac aagtgtgaac attgtggcag atgttattcc tcaacttcct gccttaaaag
     1141 acatcaaaca attcactctg aagacaaccc ctacaagtgt gaagagtgtg gcaaatattt
     1201 ttcctcatct acctgtctta gaactcatca aacagttcat tctgtggaca actcctacaa
     1261 gtgtgatgag tgtggcagat attattcctc atctttatcc cttacacgac atcaaataat
     1321 ccattctgaa gacaatccct ataaatgtga agaatgtggc aaaaggtttt cttgttctgc
     1381 aagccttcag gaacatcaaa caatccatac aggagagaaa ccatacgagt gtgaaaattg
     1441 tcacaaagcc tttcgtcatc actcatccct caggaaacat aagacagtgc atactggaga
     1501 gaaaccttac aagtgtgaaa agtgtggcag atgtttttcc agacattcct gccttagaat
     1561 ccatcaagca attcattctg atggcaatcc acacaagtgt gtggagtgtg gtaaaacctt
     1621 tgttaatgtt tatcgcctta ctcgacacat gaaagttcat tctagagaga aatcctacaa
     1681 agatcttaaa aagtgtgtcc ttattcaggc cttaaaagat atcaaataaa taattcatac
     1741 tgaataaagt tttgtgactg tgtggagtgt ggtaaaaatc tttcctaatc ctcagacctt
     1801 atccaactca aagcaatcca tagggtagac tattaagtga attagtttag aatgtcagca
     1861 caaacatctg acttccacca gcaaaaatgc tgagaatgtt accagagaac agtagagact
     1921 ttgctttaac ctcccaatca ggttcaatag tgtgcctgaa tgttgcttga ttttatgagt
     1981 ttcttctgta cctatagata taaaacgaaa ttgttacctt ttcataacat gggtctgaga
     2041 tctgggtcat gttatagtta ctgttgtttt tctcagtagg atcacccaag ctcctctaac
     2101 aatgtttctc ccgggcaggt aaaaagctct ataaacttaa atttctcttc tttaataaaa
     2161 tggtctgttc tggttttaac ctaggtcgaa tggacattag tgtttctcca ggaaaatcta
     2221 accagagcac attgtcagtc atatttagtt ccagaataaa gaatctttat ttcctttaat
     2281 ttcaaaactg tttctcatct tttcccacct ttcatgtcag aaacttggca ctgaattgaa
     2341 atatggccgg aagccacatg cactcgctta gtagaaagga tgtgattagt ggatatgtga
     2401 tgtcagtcat gaaacatagg ttcagttctt gctttgttac taatacagat cctaagaagt
     2461 cctctcaaac gtaagtttat tactttgggt aaatagttat gtcacaggca attaatacct
     2521 aaacgttaac aattattaat ttttaagtaa ctaaatgtct gtaatgtact taaaattata
     2581 gttttcatca tgctaagtac aagtaaaact tatttatgga gacaagatag ggtgaagaga
     2641 ctaattttta tctctcaatc tatagtcgtc tatatgtgct attgaaggac atcctgaaac
     2701 acatacttca atacaagttt aaaataaact tagtatattt aataaaacat aaattttaaa
     2761 atcaactgta attatatttt taaaaaatct tggtctgaga aatagagtgc tagagctaag
     2821 atgttaagtt tacaagatgc tcagatggca ggacatcccc aggctccata gtacctatca
     2881 ctccttttgg atgagaaaca gaccctatca gagaaaattg catgctagct acataccata
     2941 aaatgccatg tttgtaatat gaaaagtctg aaagtctggt actcttgtct ccctgctaca
     3001 ccttgcctca aaattgggcc ctgatgagtt agttaactgg ttgctaagtt ttttttcaaa
     3061 tgccaggttt cttcaggaaa aatgagacca agggtccagt ccctgcccct tcataaaatt
     3121 taaggatttg aaaagaagta aaagaactgg agaatgacat gacttaggcc aggtcaggtt
     3181 atcctcacac agtatctcat accctcaggt gcctcttcag ggaagtaaat cgaatctccc
     3241 atttactgaa aaaggaatcc ttattatctg ctgaaagagg atctatgttg ttgtaaaagt
     3301 ataacaataa aaaagtatag ttgtctttta cccgctaggt ccgcactgtg gtgccccaag
     3361 atatctccta gatatcttgg cagaaacaca tcccagccac acacttttct acactgaaac
     3421 cctcacataa aagaacacac aacacaataa tcttagatcc aattggtaag atataattgc
     3481 ccacttaaac atataaagcc cggtaccatc cattccttga gaacattaat aacaacctgt
     3541 aaatacacag agcagaatct taacattacc tgccatcttg tcctgccacg gcttctctcc
     3601 tctctcctcc agtctctgtt ctagtctcct cctcttcctt cgaacttatc tcccacccaa
     3661 ccttccttct cctcggatga caggcctcgg ggcagtggaa ttagcatcaa aatacagata
     3721 acttcagggc aaaccacaac agatctatat gtatagaaag gatctctctt gaaaattggc
     3781 cattatgttg tgttttttag gtgtaagggt cccacttccc agatgtggaa gggtacagtg
     3841 aaaatactaa acaacaacaa aaactaagca aacataacag aacccatggg tgttatctct
     3901 tgtgatgtga gtgcagcctt ttgactttta aaattctacc ctcacttcct tccctagtaa
     3961 gagccttttt gggtggaagc acagtcttgc tcacctacat tcttaaatgg cttaataata
     4021 aggaagattt gtaacttcct tacatgggtt atttcattta ccagtttttg aagtaaagat
     4081 ttctcatttt atgaacagtg gcagttcatt cataccatca agtggtacta acttagaagc
     4141 ttcctgtcta ctggctagct ttcatagtgg aggcacaatc tagctatcct accatggtaa
     4201 taatgtgata aaccatctta cccagccgtg aacccaggga gtagaataaa tggctgggca
     4261 aattgatgtg ttcatggaac aatagtcaca acaaagttat gggagtgacc aattattttc
     4321 tggttgaatt taaagctcat tccatgaaca gtaactaaga actggtgatg gtgggggttg
     4381 gggatttagc tcagtggtag agcgcttgcc tagcaagtgc aaggccctgg gttctgtccc
     4441 cagctccgga aaaaaaagaa aagggaaaaa aaaaaaaaaa aaaaaaaaaa aaaagaactg
     4501 gtgatggtaa tcagatgata agcctgtttg ggtctaggtg aaatgcccta gggagaacct
     4561 actcctgtta ttcttatgca tgactgggaa ctagatgaac ccaagctctt atctttgtac
     4621 ccacagattc aggcaccttc taccacacac cagaaaattc aattgtgtgg taggtggaga
     4681 ataatccgga gactcacaat tggtccaagt gtggagaaca atttgtggag ggcactgatc
     4741 tagatgcatt acctatatca tactgctgat gccaaaactc agggatctct gagggagcag
     4801 agatagaaag aagatcatag ccagatacag tgatgtctac agtgaaagca tatttgctag
     4861 aaatgtcagg gctatttcaa tcatgttcac actgtgtcta acactacttg cacagcatgt
     4921 gtacaagcta aaaccagcca tgcaacaagc atgttgccta agggcctcat aatgtctcac
     4981 cccaagtgga ggagctatgc ctcttgcagg agacatttaa tctgagggga tcctagtctc
     5041 ctgttgattg gcctccaccc ctacacaaag agggagcact gagtggaata aagaaattaa
     5101 gaaagttgaa agacattgga gcataaattg ttataaaggg taaaaaatta atttgaggtg
     5161 aaggaatgtg aatattttaa taaaacacat tatacgttta ttaaattctc ccccaacaaa
     5221 aaccacaaaa gcccacatac acatggaagt tgaatagaac tctactcaat gataacctag
     5281 tcaaggaaga aataaagaaa tgaagacttt ttagaattta atgataatga aggcacaaca
     5341 tacccaaact tatgggacac aatgaaagct gtgctaagag gaaatgtcat atagctctga
     5401 gtgcctccag aaagaaactg gacagagcat aaactagcag cttgacagta cacctaaaag
     5461 ctctagaaca aaaagaagca aatgtaccca agaggagtag actgcaggta atcaaactca
     5521 gggctgaaaa caaccaagaa caaacaaaag agctatacaa agaatcaaca aaaccaggag
     5581 cttgtttttt tagaaaatca gcaagataga taaacctgta gccagactaa ctagagggca
     5641 cagagtatcc aaattagcaa aatcagaaat gaaaagagag acataataac agaaaccaag
     5701 aaaattaaaa aaaagtcatc agatcccaca aaagcctatt gtcaacaaaa ctggaaaatc
     5761 tggaggaaat ggatattttt ctagacagat gccaggtacc aaagttaaat caggatcaaa
     5821 taaaccatcc aaacagtttc ataactccta cagaaataga agcagtcatt aaaagtctcc
     5881 cgcaaaaaaa aaaaaaaaaa aaaaaaacca aacc
//
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