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NCBI Reference Sequence: XM_063281439.1
FASTA Graphics
LOCUS XM_063281439 5914 bp mRNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus zinc finger protein 455 (Zfp455), transcript variant X4, mRNA. ACCESSION XM_063281439 VERSION XM_063281439.1 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_086020) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_036323735.1-RS_2024_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/09/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5914 /organism="Rattus norvegicus" /mol_type="mRNA" /strain="BN/NHsdMcwi" /bio_material="RGD 61498" /db_xref="taxon:10116" /chromosome="2" /sex="male" /tissue_type="kidney, spleen, liver" /geo_loc_name="USA: Wisconsin, Milwaukee" /lat_lon="43.05 N 88.04 W" /collected_by="Rebecca Schilling, Melinda Dwinell" gene 1..5914 /gene="Zfp455" /gene_synonym="Kzf-2; Kzf2" /note="zinc finger protein 455; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 25 long SRA reads, 2 Proteins" /db_xref="GeneID:286979" /db_xref="RGD:628788" CDS 191..1729 /gene="Zfp455" /gene_synonym="Kzf-2; Kzf2" /codon_start=1 /product="zinc finger protein 455 isoform X1" /protein_id="XP_063137509.1" /db_xref="GeneID:286979" /db_xref="RGD:628788" /translation="MLSFWDVAIDFSPEEWECLEPVQWNLYRDVMLENYSNFVFLGLT FSKPFLVTFLEQGQGPWDMQRQAAAAVHPGIALNDPNCYSKTTNCKSLLIKRRKLHIG EKPYKCEECGKALGSLKTLSIHQRLHTGDKPYKCKECHKAFSTRSALFIHMKNHTDEK THKCEECGRLFYYPSMLKQHQRIHSRVKPYKCQECGKAFTDPSFLKKHQKIHFRKHTY QFKECVKRFSPPIHLQEQIHTGQKPFKCGECFKAFHNHLALRKHQTVHFGEKPYKCEE CGRCYSTSFYLRRHQTIHSKYKSYKCEHCGRCYSSTSCLKRHQTIHSEDNPYKCEECG KYFSSSTCLRTHQTVHSVDNSYKCDECGRYYSSSLSLTRHQIIHSEDNPYKCEECGKR FSCSASLQEHQTIHTGEKPYECENCHKAFRHHSSLRKHKTVHTGEKPYKCEKCGRCFS RHSCLRIHQAIHSDGNPHKCVECGKTFVNVYRLTRHMKVHSREKSYKDLKKCVLIQAL KDIK" polyA_site 5914 /gene="Zfp455" /gene_synonym="Kzf-2; Kzf2" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctcaaagttg gcgggaaagc gtgtgcggct gtccatttct gttgtccgat acatggagac 61 ctacacataa gtgtgcagct cttactgctc aaagcacttc tagctgccgc acagagagca 121 tcacagaaaa ccaaaactta ccaaaaatgc agagaactat ggatgatctt gtgatctgac 181 ccaataggaa atgctgtcct tctgggatgt ggccattgat ttctctccag aagagtggga 241 atgcctggag cctgttcagt ggaatctgta cagggacgtg atgttagaga attacagcaa 301 ctttgtgttc ctgggtctaa ctttctctaa gccattcttg gtaacattcc tggagcaagg 361 acaagggcct tgggatatgc agagacaagc agccgccgct gtgcacccag gaatagctct 421 caatgatccc aactgttaca gcaagaccac taactgtaaa tcactcctta ttaaacgacg 481 aaaacttcat ataggggaga aaccctacaa gtgtgaagaa tgtggtaagg cccttggttc 541 tcttaaaaca ctttctatac accagagact tcatactgga gacaaaccct acaagtgtaa 601 agagtgtcat aaggccttta gtactcgctc agcacttttt atacacatga aaaatcatac 661 tgatgaaaaa acccacaagt gtgaagaatg tggcagatta ttttactatc cttcaatgct 721 gaaacaacat cagagaattc attctagagt gaaaccctac aagtgtcaag aatgtggaaa 781 agcttttact gatccttcat tccttaagaa gcatcaaaaa attcattttc gaaaacatac 841 ctaccagttt aaagaatgtg tcaaaagatt ttctcctcct atacaccttc aggaacaaat 901 ccatactgga cagaaacctt tcaaatgtgg agaatgtttt aaagcctttc ataatcactt 961 agcccttagg aaacaccaga cagttcattt tggagagaaa ccttataagt gcgaagaatg 1021 tggccgatgt tattccacat ctttctacct tagaagacat caaacaatcc actctaaata 1081 caagtcctac aagtgtgaac attgtggcag atgttattcc tcaacttcct gccttaaaag 1141 acatcaaaca attcactctg aagacaaccc ctacaagtgt gaagagtgtg gcaaatattt 1201 ttcctcatct acctgtctta gaactcatca aacagttcat tctgtggaca actcctacaa 1261 gtgtgatgag tgtggcagat attattcctc atctttatcc cttacacgac atcaaataat 1321 ccattctgaa gacaatccct ataaatgtga agaatgtggc aaaaggtttt cttgttctgc 1381 aagccttcag gaacatcaaa caatccatac aggagagaaa ccatacgagt gtgaaaattg 1441 tcacaaagcc tttcgtcatc actcatccct caggaaacat aagacagtgc atactggaga 1501 gaaaccttac aagtgtgaaa agtgtggcag atgtttttcc agacattcct gccttagaat 1561 ccatcaagca attcattctg atggcaatcc acacaagtgt gtggagtgtg gtaaaacctt 1621 tgttaatgtt tatcgcctta ctcgacacat gaaagttcat tctagagaga aatcctacaa 1681 agatcttaaa aagtgtgtcc ttattcaggc cttaaaagat atcaaataaa taattcatac 1741 tgaataaagt tttgtgactg tgtggagtgt ggtaaaaatc tttcctaatc ctcagacctt 1801 atccaactca aagcaatcca tagggtagac tattaagtga attagtttag aatgtcagca 1861 caaacatctg acttccacca gcaaaaatgc tgagaatgtt accagagaac agtagagact 1921 ttgctttaac ctcccaatca ggttcaatag tgtgcctgaa tgttgcttga ttttatgagt 1981 ttcttctgta cctatagata taaaacgaaa ttgttacctt ttcataacat gggtctgaga 2041 tctgggtcat gttatagtta ctgttgtttt tctcagtagg atcacccaag ctcctctaac 2101 aatgtttctc ccgggcaggt aaaaagctct ataaacttaa atttctcttc tttaataaaa 2161 tggtctgttc tggttttaac ctaggtcgaa tggacattag tgtttctcca ggaaaatcta 2221 accagagcac attgtcagtc atatttagtt ccagaataaa gaatctttat ttcctttaat 2281 ttcaaaactg tttctcatct tttcccacct ttcatgtcag aaacttggca ctgaattgaa 2341 atatggccgg aagccacatg cactcgctta gtagaaagga tgtgattagt ggatatgtga 2401 tgtcagtcat gaaacatagg ttcagttctt gctttgttac taatacagat cctaagaagt 2461 cctctcaaac gtaagtttat tactttgggt aaatagttat gtcacaggca attaatacct 2521 aaacgttaac aattattaat ttttaagtaa ctaaatgtct gtaatgtact taaaattata 2581 gttttcatca tgctaagtac aagtaaaact tatttatgga gacaagatag ggtgaagaga 2641 ctaattttta tctctcaatc tatagtcgtc tatatgtgct attgaaggac atcctgaaac 2701 acatacttca atacaagttt aaaataaact tagtatattt aataaaacat aaattttaaa 2761 atcaactgta attatatttt taaaaaatct tggtctgaga aatagagtgc tagagctaag 2821 atgttaagtt tacaagatgc tcagatggca ggacatcccc aggctccata gtacctatca 2881 ctccttttgg atgagaaaca gaccctatca gagaaaattg catgctagct acataccata 2941 aaatgccatg tttgtaatat gaaaagtctg aaagtctggt actcttgtct ccctgctaca 3001 ccttgcctca aaattgggcc ctgatgagtt agttaactgg ttgctaagtt ttttttcaaa 3061 tgccaggttt cttcaggaaa aatgagacca agggtccagt ccctgcccct tcataaaatt 3121 taaggatttg aaaagaagta aaagaactgg agaatgacat gacttaggcc aggtcaggtt 3181 atcctcacac agtatctcat accctcaggt gcctcttcag ggaagtaaat cgaatctccc 3241 atttactgaa aaaggaatcc ttattatctg ctgaaagagg atctatgttg ttgtaaaagt 3301 ataacaataa aaaagtatag ttgtctttta cccgctaggt ccgcactgtg gtgccccaag 3361 atatctccta gatatcttgg cagaaacaca tcccagccac acacttttct acactgaaac 3421 cctcacataa aagaacacac aacacaataa tcttagatcc aattggtaag atataattgc 3481 ccacttaaac atataaagcc cggtaccatc cattccttga gaacattaat aacaacctgt 3541 aaatacacag agcagaatct taacattacc tgccatcttg tcctgccacg gcttctctcc 3601 tctctcctcc agtctctgtt ctagtctcct cctcttcctt cgaacttatc tcccacccaa 3661 ccttccttct cctcggatga caggcctcgg ggcagtggaa ttagcatcaa aatacagata 3721 acttcagggc aaaccacaac agatctatat gtatagaaag gatctctctt gaaaattggc 3781 cattatgttg tgttttttag gtgtaagggt cccacttccc agatgtggaa gggtacagtg 3841 aaaatactaa acaacaacaa aaactaagca aacataacag aacccatggg tgttatctct 3901 tgtgatgtga gtgcagcctt ttgactttta aaattctacc ctcacttcct tccctagtaa 3961 gagccttttt gggtggaagc acagtcttgc tcacctacat tcttaaatgg cttaataata 4021 aggaagattt gtaacttcct tacatgggtt atttcattta ccagtttttg aagtaaagat 4081 ttctcatttt atgaacagtg gcagttcatt cataccatca agtggtacta acttagaagc 4141 ttcctgtcta ctggctagct ttcatagtgg aggcacaatc tagctatcct accatggtaa 4201 taatgtgata aaccatctta cccagccgtg aacccaggga gtagaataaa tggctgggca 4261 aattgatgtg ttcatggaac aatagtcaca acaaagttat gggagtgacc aattattttc 4321 tggttgaatt taaagctcat tccatgaaca gtaactaaga actggtgatg gtgggggttg 4381 gggatttagc tcagtggtag agcgcttgcc tagcaagtgc aaggccctgg gttctgtccc 4441 cagctccgga aaaaaaagaa aagggaaaaa aaaaaaaaaa aaaaaaaaaa aaaagaactg 4501 gtgatggtaa tcagatgata agcctgtttg ggtctaggtg aaatgcccta gggagaacct 4561 actcctgtta ttcttatgca tgactgggaa ctagatgaac ccaagctctt atctttgtac 4621 ccacagattc aggcaccttc taccacacac cagaaaattc aattgtgtgg taggtggaga 4681 ataatccgga gactcacaat tggtccaagt gtggagaaca atttgtggag ggcactgatc 4741 tagatgcatt acctatatca tactgctgat gccaaaactc agggatctct gagggagcag 4801 agatagaaag aagatcatag ccagatacag tgatgtctac agtgaaagca tatttgctag 4861 aaatgtcagg gctatttcaa tcatgttcac actgtgtcta acactacttg cacagcatgt 4921 gtacaagcta aaaccagcca tgcaacaagc atgttgccta agggcctcat aatgtctcac 4981 cccaagtgga ggagctatgc ctcttgcagg agacatttaa tctgagggga tcctagtctc 5041 ctgttgattg gcctccaccc ctacacaaag agggagcact gagtggaata aagaaattaa 5101 gaaagttgaa agacattgga gcataaattg ttataaaggg taaaaaatta atttgaggtg 5161 aaggaatgtg aatattttaa taaaacacat tatacgttta ttaaattctc ccccaacaaa 5221 aaccacaaaa gcccacatac acatggaagt tgaatagaac tctactcaat gataacctag 5281 tcaaggaaga aataaagaaa tgaagacttt ttagaattta atgataatga aggcacaaca 5341 tacccaaact tatgggacac aatgaaagct gtgctaagag gaaatgtcat atagctctga 5401 gtgcctccag aaagaaactg gacagagcat aaactagcag cttgacagta cacctaaaag 5461 ctctagaaca aaaagaagca aatgtaccca agaggagtag actgcaggta atcaaactca 5521 gggctgaaaa caaccaagaa caaacaaaag agctatacaa agaatcaaca aaaccaggag 5581 cttgtttttt tagaaaatca gcaagataga taaacctgta gccagactaa ctagagggca 5641 cagagtatcc aaattagcaa aatcagaaat gaaaagagag acataataac agaaaccaag 5701 aaaattaaaa aaaagtcatc agatcccaca aaagcctatt gtcaacaaaa ctggaaaatc 5761 tggaggaaat ggatattttt ctagacagat gccaggtacc aaagttaaat caggatcaaa 5821 taaaccatcc aaacagtttc ataactccta cagaaataga agcagtcatt aaaagtctcc 5881 cgcaaaaaaa aaaaaaaaaa aaaaaaacca aacc //
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