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NCBI Reference Sequence: XM_063266034.1
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LOCUS XM_063266034 2957 bp mRNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus RAB27A, member RAS oncogene family (Rab27a), transcript variant X2, mRNA. ACCESSION XM_063266034 VERSION XM_063266034.1 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_086026) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_036323735.1-RS_2024_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/09/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2957 /organism="Rattus norvegicus" /mol_type="mRNA" /strain="BN/NHsdMcwi" /bio_material="RGD 61498" /db_xref="taxon:10116" /chromosome="8" /sex="male" /tissue_type="kidney, spleen, liver" /geo_loc_name="USA: Wisconsin, Milwaukee" /lat_lon="43.05 N 88.04 W" /collected_by="Rebecca Schilling, Melinda Dwinell" gene 1..2957 /gene="Rab27a" /gene_synonym="ram" /note="RAB27A, member RAS oncogene family; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 219 long SRA reads, 18 Proteins" /db_xref="GeneID:50645" /db_xref="RGD:620918" CDS 339..1004 /gene="Rab27a" /gene_synonym="ram" /codon_start=1 /product="ras-related protein Rab-27A isoform X1" /protein_id="XP_063122104.1" /db_xref="GeneID:50645" /db_xref="RGD:620918" /translation="MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGI DFREKRVVYRANGPDGTVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLT NEQSFLNVRNWISQLQMHAYCENPDIVLCGNKSDLEDQRAVKEEEARELAEKYGIPYF ETSAANGTNISQAIEMLLDLIMKRMERCVDKSWIPEGVVRSNGHTSTDQLSEEKEKGL CGC" polyA_site 2957 /gene="Rab27a" /gene_synonym="ram" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cctttggttt ggatctaaga agcctgaccc ggggaaatca cttgactgct tggcccagcc 61 gcatgacaag cagctgagac tcattagcca gactgtgggt ttccgtggac aggcctgtag 121 gatagacagc tttcaaagga gtctttagag aaactttcct aagcaggctg tttggccttt 181 accggttctc tttgttgtaa tgcgagattc agtgtgacct tggagaccga gagatgtgat 241 tctgagttgt cagttggtgt gttggcgact ccagaccaaa ggtttaaaaa cacaactggg 301 ctccctccta actcaggtaa agcagagagg cctccatcat gtcggatgga gattatgact 361 acctcatcaa gtttttggcc ttgggagact ctggagtggg gaagaccagt gtactgtacc 421 agtacactga tgggaagttc aactccaaat tcatcaccac agtgggcatt gatttcaggg 481 aaaagagagt ggtgtacaga gcgaatggac cagatggaac tgtaggccga ggccagagaa 541 ttcacctgca gttatgggac acggcggggc aggagaggtt tcgtagcctg accacggcat 601 tcttcaggga cgctatgggt ttcctgcttc tgttcgacct gacaaacgag caaagtttcc 661 tcaatgtccg aaactggata agccagctac agatgcacgc gtactgcgaa aacccagata 721 tagtgctctg cggaaataag agtgacctag aagaccagag ggctgtgaaa gaggaggaag 781 ccagggaact cgcagagaag tatggaatcc cctattttga aaccagcgct gccaatggga 841 caaacataag ccaagcaatt gagatgctcc tggacctgat catgaagcgg atggagcggt 901 gtgtggacaa atcctggatt ccagaggggg tggtgcggtc caatggccat acttctacag 961 atcaactcag tgaggagaag gagaaggggt tatgcggctg ttgagacacc gagtgagcat 1021 ggtggcggca gtggcggcag cagcgcctgg cccctgcctg ccaaatcctc tgtagagacc 1081 aagccagcat cacgtgccaa gtgctgctcc ttatccccag tagaactgac tcaacatcca 1141 attgtaactc attgcaactt catatgattt agtccatgaa ttgggggaac tatttcacag 1201 agccaaaagt gtcttagaga aaaaaaaagc ccatggccgc gggtcattca gggatccaag 1261 atttcagcca tggaagattg cgtgtcatgt agaatgctga tggtcccgtc gcctgcctta 1321 acagtcaact gcctcaacac agccctagag tctcactgaa gacgttaaga tgtttgggca 1381 atgaaaagct agcatggtct agagaatcca gagttcagaa tccataccgt agaatatcac 1441 tctcacgtga atgctaataa gtgtgtacca tggatcaatg tctttcagca ttaccttaaa 1501 cttagccttc cctttgacat gaacgtaaac agatggcggc catatctata ggctctgagt 1561 agaccggatt gactcaccgt gagtttgggg gtgggtgaag tagggatcaa gtttagtcag 1621 attgtctggc ttttagccgc ggggtcatgg agaccctcga gtttatccgt ggttcagccc 1681 acatctgaac attgaagatg catctgctgt gtgtgcattt gtacgtatgt ctggtctggc 1741 acttcaggct gtgctttcac ttgtctgtag actgcgaatt tgacttttcc atcaagcttt 1801 ggtggtgttg gggtttccca gtttgttttc tcccccattt gtgtaactga aggaagctct 1861 tgttaattat acagcttgtt tatttgctat ctggagggag atcaatgtct gtctttaagc 1921 agtcacattt atatgctagt ttaggagagg tgttttttag cctgtaactt tcactgagaa 1981 tttgggcact tatgtttttt gacagtataa aggaaaccac gtgctttgca tggtagtttt 2041 cgagtggctt tttttgttgt tgttgttttt gttttgtttt tttgggggga cagggtctta 2101 ttatgtagtt tctggccagc ctgaaagtcc ctttgtagac caggctggcc tcaaactcac 2161 agagatccac ctgtttcagc cccctaagtg ttgggataaa aggtgtggtc atcacacctg 2221 gctctcagaa gatttttaaa aatggaacat cgatcattta ttgccattgt cctttgaccc 2281 cctccccaga caaaatagcc atggctacta agctttttct gtccctgaaa taagggactc 2341 tttgaaacac caaagttgtc accgaggcct atgcatctga atcctaaaga ccggaaactt 2401 ggggcccatc acagtcgtgc cttccaatgt tgctctaaga cttcagtgga ctgtactgca 2461 cgtcagggca cgtttcttaa ttaatgtctc ctttgtaaat acaaacgtat tactatgcca 2521 ggtgttggtg gcgcactcct tcaatctccc gcagttggga ggcagaggca ggcagcgagt 2581 ttgaagccag gctggtcaat agagtttcag gacagacagt gacacagtga aattctgttt 2641 caagaatcaa agccaatgtt tgcacagtgc aggtttctag aaggagatcc attgtcggat 2701 tcgccttctg ttggccccgc accaggcacg gatgttaaga tatgtgatag ttgcccagcg 2761 agagagcggc cttgaattgt tgaaatcaaa caaaactgta ttctctttga aaatgattta 2821 aatttgatat aaaataactg tacttattgt cactgtattt ttctatttac aaatctgtat 2881 gaaagcaaac gctcttcagt gaactttgtg ccaattaaac cataataata aataataaaa 2941 gaggtccagt atataaa //
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