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NCBI Reference Sequence: XM_054378812.1
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LOCUS XM_054378812 4080 bp mRNA linear PRI 26-AUG-2024 DEFINITION PREDICTED: Homo sapiens SAFB like transcription modulator (SLTM), transcript variant X19, mRNA. ACCESSION XM_054378812 VERSION XM_054378812.1 DBLINK BioProject: PRJNA807723 KEYWORDS RefSeq; includes ab initio. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_060939) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_009914755.1-RS_2024_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; RefSeqFE; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/23/2024 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 6% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..4080 /organism="Homo sapiens" /mol_type="mRNA" /isolate="CHM13" /db_xref="taxon:9606" /chromosome="15" /sex="female" /cell_line="CHM13htert" /tissue_type="hydatidiform mole" /note="haploid cell line" gene 1..4080 /gene="SLTM" /gene_synonym="Met" /note="SAFB like transcription modulator; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 75 ESTs, 1708 long SRA reads, 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns" /db_xref="GeneID:79811" /db_xref="HGNC:HGNC:20709" CDS 711..3131 /gene="SLTM" /gene_synonym="Met" /codon_start=1 /product="SAFB-like transcription modulator isoform X19" /protein_id="XP_054234787.1" /db_xref="GeneID:79811" /db_xref="HGNC:HGNC:20709" /translation="MEAHTTVKEAEDDNISVTIQAEDAITLDFDGDDLLETGKNVKIT DSEASKPKDGQDAIAQSPEKESKDYEMNANHKDGKKEDCVKGDPVEKEARESSKKAES GDKEKDTLKKGPSSTGASGQAKSSSKESKDSKTSSKDDKGSTSSTSGSSGSSTKNIWV SGLSSNTKAADLKNLFGKYGKVLSAKVVTNARSPGAKCYGIVTMSSSTEVSRCIAHLH RTELHGQLISVEKVKGDPSKKEMKKENDEKSSSRSSGDKKNTSDRSSKTQASVKKEEK RSSEKSEKKESKDTKKIEGKDEKNDNGASGQTSESIKKSEEKKRISSKSPGHMVILDQ TKGDHCRPSRRGRYEKIHGRSKEKERASLDKKRDKDYRRKEILPFEKMKEQRLREHLV RFERLRRAMELRRRREIAERERRERERIRIIREREERERLQRERERLEIERQKLERER MERERLERERIRIEQERRKEAERIAREREELRRQQQQLRYEQEKRNSLKRPRDVDHRR DDPYWSENKKLSLDTDARFGHGSDYSRQQNRFNDFDHRERGRFPESSAVQSSSFERRD RFVGQSEGKKARPTARREDPSFERYPKNFSDSRRNEPPPPRNELRESDRREVRGERDE RRTVIIHDRPDITHPRHPREAGPNPSRPTSWKSEGSMSTDKRETRVERPERSGREVSG HSVRGAPPGNRSSASGYGSREGDRGVITDRGGGSQHYPEERHVVERHGRDTSGPRKEW HGPPSQGPSYHDTRRMGDGRAGAGMITQHSSNASPINRIVQISGNSMPRGSGSGFKPF KGGPPRRF" ORIGIN 1 attgtgcgca gcgctgcgcg gcgccggcgg ccgccgaggc ctgggtggaa gttggcgctg 61 ctgccgccgc cctgcagccc actcgctgcc tcggcagcgc gctgctcttc taagatggct 121 gccgctaccg gtgcggtggc agcctcggcc gcctcgggtc aggcggaagg taaaaagatc 181 accgatctgc gggtcatcga tctgaagtcc gagctgaagc ggcggaactt agacatcacc 241 ggagtcaaga ccgtgctcat ctcccgactc aagcaggtaa aaaacatgaa gcagatgagt 301 tgagtggaga tgcttctgtg gaagatgatg cttttatcaa ggactgtgaa ttggagaatc 361 aagaggcaca tgagcaagat ggaaatgatg aactaaagga ctctgaagaa tttggtgaaa 421 atgaagaaga aaatgtgcat tccaaggagt tactctctgc agaagaaaac aagagagctc 481 atgaattaat agaggcagaa ggaatagaag atatagaaaa agaggacatc gaaagtcagg 541 aaattgaagc tcaagaaggt gaagatgata cctttctaac agcccaagat ggtgaggaag 601 aagaaaatga gaaagatata gcaggttctg gtgatggtac acaagaagta tctaaacctc 661 ttccttcaga agggagccta gctgaggctg atcacacagc tcatgaagag atggaagctc 721 atacgactgt gaaagaagct gaggatgaca acatctcggt cacaatccag gctgaagatg 781 ccatcactct ggattttgat ggtgatgacc tcctagaaac aggtaaaaat gtgaaaatta 841 cagattctga agcaagtaag ccaaaagatg ggcaggacgc cattgcacag agcccggaga 901 aggaaagcaa ggattatgag atgaatgcga accataaaga tggtaagaag gaagactgcg 961 tgaagggtga ccctgtcgag aaggaagcca gagaaagttc taagaaagca gaatctggag 1021 acaaagaaaa ggatactttg aagaaagggc cctcgtctac tggggcctct ggtcaagcaa 1081 agagctcttc aaaggaatct aaagacagca agacatcatc taaagatgac aaaggaagta 1141 caagtagtac tagtggtagc agtggaagct caactaaaaa tatctgggtt agtggacttt 1201 catctaatac caaagctgct gatttgaaga acctctttgg caaatatgga aaggttctga 1261 gtgcaaaagt agttacaaat gctcgaagtc ctggggcaaa atgctatggc attgtaacta 1321 tgtcttcaag cacagaggtg tccaggtgta ttgcacatct tcatcgcact gagctgcatg 1381 gacagctgat ttctgttgaa aaagtaaaag gtgatccctc taagaaagaa atgaagaaag 1441 aaaatgatga aaagagtagt tcaagaagtt ctggagataa aaaaaatacg agtgatagaa 1501 gtagcaagac acaagcctct gtcaaaaaag aagagaaaag atcgtctgag aaatctgaaa 1561 aaaaagaaag caaggatact aagaaaatag aaggtaaaga tgagaagaat gataatggag 1621 caagtggcca aacatcagaa tcgattaaaa aaagtgaaga aaagaagcga ataagttcca 1681 agagtccagg acatatggta atactagacc aaactaaagg agatcattgt agaccatcaa 1741 gaagaggaag atatgagaaa attcatggaa gaagtaagga aaaggagaga gctagtctag 1801 ataaaaaaag agataaagac tacagaagga aagagatctt gccttttgaa aagatgaagg 1861 aacaaaggtt gagagaacat ttagttcgtt ttgaaaggct gcgacgagca atggaacttc 1921 gaagacgaag agagattgca gagagagagc gtcgagagcg agaacgcatt agaataattc 1981 gtgaacggga agaacgggaa cgcttacaga gagagagaga gcgcctagaa attgaaaggc 2041 aaaaactaga gagagagaga atggaacgcg aacgcttgga aagggaacgc attcgtattg 2101 aacaggaacg tcgtaaggaa gctgaacgga ttgctcgaga aagagaggaa ctcagaaggc 2161 aacaacagca gcttcgttat gaacaagaaa aaaggaattc cttgaaacgc ccacgtgatg 2221 tagatcatag gcgagatgat ccttactgga gcgagaataa aaagttgtct ctagatacag 2281 atgcacgatt tggccatgga tccgactact ctcgccaaca gaacagattt aatgactttg 2341 atcaccgaga gaggggcagg tttcctgaga gttcagcagt acagtcttca tcttttgaaa 2401 ggcgggatcg ctttgttggt caaagtgagg ggaaaaaagc acgacctact gcacgaaggg 2461 aagatccaag cttcgaaaga tatcccaaaa atttcagtga ctccagaaga aatgagcctc 2521 caccaccaag aaatgaactt agagaatcag acaggcgaga agtacgaggg gagcgagacg 2581 aaaggagaac ggtgattatt catgacaggc ctgatatcac tcatcctaga catcctcgag 2641 aggcagggcc caatccttcc agacccacca gctggaaaag tgaaggaagc atgtccactg 2701 acaaacggga aacaagagtt gaaaggccag aacgatctgg gagagaagta tcagggcaca 2761 gtgtgagagg cgctccccct gggaatcgta gcagcgcttc ggggtacggg agcagagagg 2821 gagacagagg agtcatcaca gaccgaggag gtggatcaca gcactatcct gaggagcgac 2881 atgtggttga acgccatgga cgggacacaa gcggaccaag gaaagagtgg catggtccac 2941 cctctcaagg gcctagctat catgatacga ggcgaatggg tgacggccgg gcaggagcag 3001 gcatgataac ccaacattca agtaacgcat ccccaattaa tagaattgta caaatcagtg 3061 gcaattccat gccaagagga agtggctccg gatttaagcc atttaagggt ggacctccgc 3121 gacgattctg aaaatgagct ctctgccaag gttttaagat aatttattga aatctcctgt 3181 aaactttact tgactactta tgaagaggac ctctgacttg cttgagagtt ctgtcagact 3241 tttcttttta aaaatttaac atgattgctt ttctcaattt tggagaagat gtttaaatag 3301 ttctgttgta acttttaata gttttgtgta tcattcaact ttttttcttg cagcaccgag 3361 gcacatttga aaagatggaa ttgaagtcgt tttgtttaac gctgtgtgaa tataaagagt 3421 agtttgcagc tgtgtggtag tggtttaatt tgcagcctta gctctgtggt gtctggctct 3481 agagttactt ctttttacca agcattttca gcctccattt tgaaggctgt ctacacttaa 3541 gaagtcttag ctgtctaatt tttagagaat aagattgttc attgcatttc tgagtattat 3601 gtaacctatt tttgcagaag gtactgttac attaagtgca tctgtgtatc ctggtttaaa 3661 aaaatgtaat cttttttgaa ataaaccttc atattctgta tagttgctaa agtgttgaga 3721 acctttttaa ttgtaaaatg agaaccgatt ttcagtttag tgtagcagca cacttgttca 3781 ggtttgcatg gtatgaaacc aaatagattc atgaaacctt ggccatgagg tttgtttcac 3841 aaggttctta gaccgagttg tgcaggtaag tgcactttta ggtaatctgc actgtttgtt 3901 tgatggataa attccatctc tgggaattgt gtgggtatta atgtttccat gttcccaact 3961 atgttgagaa gtggaaaaaa acccaggttc tagatgggtg aatcagttgg gttttgtaaa 4021 tacttgtatg tggggaagac attgttgtct ttttgtgaaa ataaaaatcc acacctggaa //
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