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NCBI Reference Sequence: XM_054351275.1
FASTA Graphics
LOCUS XM_054351275 3988 bp mRNA linear PRI 26-AUG-2024 DEFINITION PREDICTED: Homo sapiens TBC1 domain containing kinase (TBCK), transcript variant X6, mRNA. ACCESSION XM_054351275 VERSION XM_054351275.1 DBLINK BioProject: PRJNA807723 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_060928) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_009914755.1-RS_2024_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; RefSeqFE; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/23/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3988 /organism="Homo sapiens" /mol_type="mRNA" /isolate="CHM13" /db_xref="taxon:9606" /chromosome="4" /sex="female" /cell_line="CHM13htert" /tissue_type="hydatidiform mole" /note="haploid cell line" gene 1..3988 /gene="TBCK" /gene_synonym="FERRY1; Fy-1; HSPC302; IHPRF3; TBCKL" /note="TBC1 domain containing kinase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 158 long SRA reads, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns" /db_xref="GeneID:93627" /db_xref="HGNC:HGNC:28261" /db_xref="MIM:616899" CDS 366..2939 /gene="TBCK" /gene_synonym="FERRY1; Fy-1; HSPC302; IHPRF3; TBCKL" /codon_start=1 /product="TBC domain-containing protein kinase-like protein isoform X2" /protein_id="XP_054207250.1" /db_xref="GeneID:93627" /db_xref="HGNC:HGNC:28261" /db_xref="MIM:616899" /translation="MFPLKDAEMGAFTFFASALPHDVCGSNGLPLTPNSIKILGRFQI LKTITHPRLCQYVDISRGKHERLVVVAEHCERSLEDLLRERKPVSCSTVLCIAFEVLQ GLQYMNKHGIVHRALSPHNILLDRKGHIKLAKFGLYHMTAHGDDVDFPIGYPSYLAPE VIAQGIFKTTDHMPSKKPLPSGPKSDVWSLGIILFELCVGRKLFQSLDISERLKFLLT LDCVDDTLIVLAEEHGCLDIIKELPETVIDLLNKCLTFHPSKRPTPDELMKDKVFSEV SPLYTPFTKPASLFSSSLRCADLTLPEDISQLCKDINNDYLAERSIEEVYYLWCLAGG DLEKELVNKEIIRSKPPICTLPNFLFEDGESFGQGRDRSSLLDDTTVTLSLCQLRNRL KDVGGEAFYPLLEDDQSNLPHSNSNNELSAAAMLPLIIREKDTEYQLNRIILFDRLLK AYPYKKNQIWKEARVDIPPLMRGLTWAALLGVEGAIHAKYDAIDKDTPIPTDRQIEVD IPRCHQYDELLSSPEGHAKFRRVLKAWVVSHPDLVYWQGLDSLCAPFLYLNFNNEALA YACMSAFIPKYLYNFFLKDNSHVIQEYLTVFSQMIAFHDPELSNHLNEIGFIPDLYAI PWFLTMFTHVFPLHKIFHLWDTLLLGNSSFPFCIGVAILQQLRDRLLANGFNECILLF SDLPEIDIERCVRESINLFCWTPKSATYRQHAQPPKPSSDSSGGRSSAPYFSAECPDP PKTDLSRESIPLNDLKSEVSPRISAEDLIDLCELTVTGHFKTPSKKTKSSKPKLLVVD IRNSEDFIRGHISGSINIPFSAAFTAEGELTQGPYTAMLQNFKGKVIVIVGHVAKHTA E" polyA_site 3988 /gene="TBCK" /gene_synonym="FERRY1; Fy-1; HSPC302; IHPRF3; TBCKL" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgggtcgcg gtggctgtga gggcggaaga aaaggccagg ctgaggggag ggtagagggt 61 gaaaagctcg gatctgtgtt tggggaaggc caggcttgcg ctcctcgccg ggttccgcga 121 aggttaacct tggctgactt ggctcgcgag caaagggcag cgtctgagct cccggcgttc 181 caggagtggc ctcttttgta ggagcacctg aaatgcagcg tctggtgcac taagccgtag 241 cggcagcagc agccacagcg acagcgctgg ggccctgtgt agaagctcca tcccccttgt 301 ctttgtgctt gcctgcgtcc ccagactcag aggcagatta tcttagaaga cctaggactc 361 caaaaatgtt tcccctgaag gacgctgaaa tgggagcctt taccttcttt gcctcggctc 421 tgccacatga tgtttgtgga agcaatggac ttcctctcac accaaattcc atcaaaattt 481 tagggcgctt tcaaatcctt aaaaccatca cccatcccag actctgccag tatgtggata 541 tttctagggg aaagcatgaa cgactagtgg tcgtggctga acattgtgaa cgtagtctgg 601 aagacttgct tcgagaaagg aaacctgtga gctgttcaac ggttttgtgt atagcatttg 661 aggttcttca gggcttgcag tatatgaaca aacatggtat agtacacagg gcattgtctc 721 ctcataatat cctgttggac cgaaagggac atattaaatt ggctaaattt ggactttatc 781 acatgacagc tcatggtgat gatgttgatt tcccaatagg gtatccctcg tacttggccc 841 ctgaggtaat tgcacaggga attttcaaaa ccactgatca catgccaagt aaaaaaccat 901 tgccttctgg ccccaaatca gatgtatggt ctcttggaat cattttattt gagctttgtg 961 tgggaagaaa attatttcag agcttggata tttctgaaag actaaaattt ttgcttactt 1021 tggattgtgt agatgacact ttaatagttc tggctgaaga gcatggttgt ttggacatta 1081 taaaggagct tcctgaaact gtgatagatc ttttgaataa gtgccttacc ttccatcctt 1141 ctaagaggcc aaccccagat gaattaatga aggacaaagt attcagtgag gtatcacctt 1201 tatatacccc ctttaccaaa cctgccagtc tgttttcatc ttctctgaga tgtgctgatt 1261 taactctgcc tgaggatatc agtcagttgt gtaaagatat aaataatgat tacctggcag 1321 aaagatctat tgaagaagtg tattaccttt ggtgtttggc tggaggtgac ttggagaaag 1381 agcttgtcaa caaggaaatc attcgatcca aaccacctat ctgcacactc cccaattttc 1441 tctttgagga tggtgaaagc tttggacaag gtcgagatag aagctcgctt ttagatgata 1501 ccactgtgac attgtcgtta tgccagctaa gaaatagatt gaaagatgtt ggtggagaag 1561 cattttaccc attacttgaa gatgaccagt ctaatttacc tcattcaaac agcaataatg 1621 agttgtctgc agctgccatg ctccctttaa tcatcagaga gaaggataca gagtaccaac 1681 taaatagaat tattctcttc gacaggctgc taaaggctta tccatataaa aaaaaccaaa 1741 tctggaaaga agcaagagtt gacattcctc ctcttatgag aggtttaacc tgggctgctc 1801 ttctgggagt tgagggagct attcatgcca agtacgatgc aattgataaa gacactccaa 1861 ttcctacaga tagacaaatt gaagtggata ttcctcgctg tcatcagtac gatgaactgt 1921 tatcatcacc agaaggtcat gcaaaattta ggcgtgtatt aaaagcctgg gtagtgtctc 1981 atcctgatct tgtgtattgg caaggtcttg actcactttg tgctccattc ctatatctaa 2041 acttcaataa tgaagccttg gcttatgcat gtatgtctgc ttttattccc aaatacctgt 2101 ataacttctt cttaaaagac aactcacatg taatacaaga gtatctgact gtcttctctc 2161 agatgattgc atttcatgat ccagagctga gtaatcatct caatgagatt ggtttcattc 2221 cagatctcta tgccatccct tggtttctta ccatgtttac tcatgtattt ccactacaca 2281 aaattttcca cctctgggat accttactac ttgggaattc ctctttccca ttctgtattg 2341 gagtagcaat tcttcagcag ctgcgggacc ggcttttggc taatggcttt aatgagtgta 2401 ttcttctctt ctccgattta ccagaaattg acattgaacg ctgtgtgaga gaatctatca 2461 acctgttttg ttggactcct aaaagtgcta cttacagaca gcatgctcaa cctccaaagc 2521 catcttctga cagcagtgga ggcagaagtt cggcacctta tttctctgct gagtgtccag 2581 atcctccaaa gacagatctg tcaagagaat ccatcccatt aaatgacctg aagtcagaag 2641 tatcaccacg gatttcagca gaggacctga ttgacttgtg tgagctcaca gtgacaggcc 2701 acttcaaaac acccagcaag aaaacaaagt ccagtaaacc aaagctcctg gtggttgaca 2761 tccggaatag tgaagacttt attcgtggtc acatttcagg aagcatcaac attccattca 2821 gtgctgcctt cactgcagaa ggggagctta cccagggccc ttacactgct atgctccaga 2881 acttcaaagg gaaggtcatt gtcatcgtgg ggcatgtggc aaaacacaca gctgagtaaa 2941 tcttgctact gctcattctt tgggtccaca ctgcctttat gagctgtaac actcaccacg 3001 aaggtctgca gcttcactcc tgaacccatc aagaccacga acccaccggg aggaacgaac 3061 aactccagat gtgccgcctt aagagctgta acactcactg caaaggtctg cagcttcact 3121 catgagccag cgagaccacg aacccaccag aaggaagaaa ctccaaacac atccgaatat 3181 cagaaggaac aaactctgga cgcgctgcct ttaagaactg taacactcac cacaagggtc 3241 cgtggctgca ttcttgaagt cagtgagacc aagaacccac cagttccgga cacagtggga 3301 ggtgtttggt catgggggca gatccttcgt gaatggcttg atgtcctctc catggtaata 3361 agtgagttct cactctgtta gttcacatga gagctcgttg tttaaaagtc tggctcttcc 3421 tcctttctct tgttcctgct catgccatgt gacatgctgg ctccctgtta ccttccacca 3481 tgattgtaag ctttgtgagg tttcatcaga gatagatgtc agcaccatgc tttctgtaaa 3541 acctgcaaaa ctgtgagcca gttaaccatc tttttttaat agattgccca gtctcaggta 3601 cttctttata gcaacacaag aacaaactaa cacagataat tggtaccagg agtggggtgt 3661 tgctgttaaa tacctgaaaa tgtggaaaca gctttggaac tgggtaatag gcagaggttg 3721 aaagagtttg gaaggctcag aagaagacag gaaaatgagt aaaagtttga aacttcttag 3781 agactgatta aatagttata accaaaatgc tgatagctgt atggacaata aagtccaggc 3841 tgattaagtc ttaggtggaa atgagagagt tattgggacc tggagttaag attacccatg 3901 ttacaccctg gcaaagaact tgacaacagt gtgttcatgt catagggatc tgagtttaaa 3961 cttaattatg atgacaagat acctggca //
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