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NCBI Reference Sequence: XM_054315206.1
FASTA Graphics
LOCUS XM_054315206 7406 bp mRNA linear PRI 26-AUG-2024 DEFINITION PREDICTED: Homo sapiens schlafen family member 13 (SLFN13), transcript variant X11, mRNA. ACCESSION XM_054315206 VERSION XM_054315206.1 DBLINK BioProject: PRJNA807723 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_060941) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_009914755.1-RS_2024_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; RefSeqFE; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/23/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7406 /organism="Homo sapiens" /mol_type="mRNA" /isolate="CHM13" /db_xref="taxon:9606" /chromosome="17" /sex="female" /cell_line="CHM13htert" /tissue_type="hydatidiform mole" /note="haploid cell line" gene 1..7406 /gene="SLFN13" /gene_synonym="hSLFN13; SLFN10" /note="schlafen family member 13; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 308 long SRA reads, 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns" /db_xref="GeneID:146857" /db_xref="HGNC:HGNC:26481" /db_xref="MIM:614957" CDS 207..1907 /gene="SLFN13" /gene_synonym="hSLFN13; SLFN10" /codon_start=1 /product="schlafen family member 13 isoform X2" /protein_id="XP_054171181.1" /db_xref="GeneID:146857" /db_xref="HGNC:HGNC:26481" /db_xref="MIM:614957" /translation="MVREKYIRPLTTEEWVEKMMDADPEFPPDFAEAFESQLSLSDSP SLCRPVYSKKGLEHKADLQQHLFPVPPGHLECTPESLWKELSLQHEGLKELIHKQMRP FSQGIVILSRSWAVDLNLQEKPGVICDALLIAQNSTPILYTILREQDAEGQDYCTRTA FTLKQKLVNMGGYTGKVCVRAKVLCLSPESSAEALEAAVSPMDYPASYSLAGTQHMEA LLQSLVIVLLGFRSLLSDQLGCEVLNLLTAQQYEIFSRSLRKNRELFVHGLPGSGKTI MAMKIMEKIRNVFHCEAHRILYVCENQPLRNFISDRNICRAETRETFLREKFEHIQHI VIDEAQNFRTEDGDWYRKAKTITQREKDCPGVLWIFLDYFQTSHLGHSGLPPLSAQYP REELTRVVRNADEIAEYIQQEMQLIIENPPINIPHGYLAILSEAKWVPGVPGNTKIIK NFTLEQIVTYVADTCRCFFERGYSPKDVAVLVSTVTEVEQYQSKLLKAMRKKMVVQLS DACDMLGVHIVLDSVRRFSGLERSIVFGIHPRTADPAILPNILICLASRAKQHLYIFL " ORIGIN 1 ggaaacgcgg agtgtcctgg agcttgacgc gctggagctt gagaggtctt tcaggactga 61 ttttggtgga agaagacagc aggcggtggg cattcactgt gctggtggga agtctggtta 121 cattaagaaa ggaattctag caaagttatt ctgtaaatac aacagaatca gttgcttttg 181 ttaaatatat tgctcccaag tcatggatgg tgagggagaa gtacatccgc cccttgacaa 241 ctgaggaatg ggtagagaaa atgatggacg cagatccaga gtttcctcca gactttgctg 301 aggcctttga gtctcagttg agtctatctg acagtccttc actttgcaga ccagtgtatt 361 ctaagaaagg tctggaacac aaagctgatc tacaacaaca tttatttcca gttccaccag 421 gacatttgga atgtactcca gagtccctct ggaaggagct gtctttacag catgaaggac 481 taaaggagtt aatacacaag caaatgcgac ctttctccca gggaattgtg atcctctcta 541 gaagctgggc tgtggacctg aacttgcagg agaagccagg agtcatctgt gatgctctgc 601 tgatagcaca gaacagcacc cccattctct acaccattct cagggagcag gatgcagagg 661 gccaggacta ctgcactcgc accgccttta ctttgaagca gaagctagtg aacatggggg 721 gctacaccgg gaaggtgtgt gtcagggcca aggtcctctg cctgagtcct gagagcagcg 781 cagaggcctt ggaggctgca gtgtctccga tggattaccc tgcgtcctat agccttgcag 841 gcacccagca catggaagcc ctgctgcagt ccctcgtgat tgtcttactc ggcttcaggt 901 ctctcttgag tgaccagctc ggctgtgagg ttttaaatct gctcacagcc cagcagtatg 961 agatattctc cagaagcctc cgcaagaaca gagagttgtt tgtccacggc ttacctggct 1021 cagggaagac catcatggcc atgaagatca tggagaagat caggaatgtg tttcactgtg 1081 aggcacacag aattctctac gtttgtgaaa accagcctct gaggaacttt atcagtgata 1141 gaaatatctg ccgagcagag acccgggaaa ctttcctaag agaaaaattt gaacacattc 1201 aacacatcgt cattgacgaa gctcagaatt tccgtactga agatggggac tggtatagga 1261 aggcaaaaac catcactcag agagaaaagg attgtccagg agttctctgg atctttctgg 1321 actactttca gaccagtcac ttgggtcaca gtggccttcc ccctctctca gcacagtatc 1381 caagagaaga gctcaccaga gtagttcgca atgcagatga aatagccgag tacatacaac 1441 aagaaatgca actaattata gaaaatcctc caattaatat cccccatggg tatctggcaa 1501 ttctcagtga agctaaatgg gttccaggtg ttccaggcaa cacaaagatt attaaaaact 1561 ttactttgga gcaaatagtg acctatgtgg cagacacctg caggtgcttc tttgaaaggg 1621 gctattctcc aaaggatgtt gctgtgcttg tcagcaccgt gacagaagtg gagcagtatc 1681 agtctaagct cttgaaagca atgaggaaga aaatggtggt gcagctcagt gatgcatgtg 1741 atatgttggg tgtgcacatt gtgttggaca gtgtccggcg attctcaggc ctggaaagga 1801 gcatagtgtt tgggatccat ccaaggacag ctgacccagc tatcttaccc aatattctga 1861 tctgtctggc ttccagggca aaacagcacc tatatatttt tctgtgaagt gactattagg 1921 aagaactcca aaccaaaata ctgtgtaaat gtctatgggt gacagtctgc tgatggtaga 1981 aacctttctt tttagttcac aagtcagtta gagatttgga cagagctgac acaaagagtt 2041 tggagctccc ccatttctgg ctctcctttc aggggttcct cccccaactc ttttcagcag 2101 tggtggctgc cccccattct gacccctgac tcttgcagcc agaaagatgg tggttttcta 2161 aaggaacttt agctgtgctg cacaatgcag acctgtgtct tgctctctgg gtaaaagcca 2221 taaaaataag aaactcagcc tgtggccttt cttccaaggc tggagttctc gagttctttt 2281 atgtgacttc gtgtagtttg ttgctttaaa aaatttgtcc agaattgttt tctgcagaag 2341 catggtctgt taggagctta caggccatag gagaagcagt tgtttcctga atttatcttt 2401 gctgtattca tttagggctt gggagagtcc caagataatt cagtcactgt cagattaatc 2461 atttcggcag aacaaacaat attgttatga ttatttaatc cttaaaattg tgatctccag 2521 agtttgttat cagaataacc cagaccaagg cttaattgta atagtgaaca ttaatggtac 2581 ctttacagag aaattatagg ccaagagaaa atgctggctt tcagtagaag ttaatattag 2641 aaacccaaat ctggttctga aagtgtgtat cagatgtacg gtgaacaaac ttgggaaaga 2701 ttttctttaa aaatcaatga gcgttggcca ggcacggtgg ctcacacctg taatcccagc 2761 tgtttgggag gctgaggcag gtggatcacc tgaggtcagg agttcaagac cagcctggcc 2821 aacatggaga aaccccatct ctactaaaaa tacaaaaatt agcagggcat ggtggtgcat 2881 gcctgtatcc cagctacttg ggaggctgaa gcatgagaat cacttgaatc ctggaggcag 2941 aggttgcagt gagctgagat catgtcactg tactccagcc tgggcaacag agtgagactg 3001 tctcaaaaag aagaagaaga aaaaaaatgc agtgagttta tgttgttaca ttgtaacatc 3061 tcagcgtagc tgtatgcatt actctatagc ataactactt aagttttatg tcattcttga 3121 actgtgattt ttttttctat ttgctttcat agtttggtgg gccattgtta tggactgaat 3181 gtttgtgtcc catcctcacc cctaaattcc catgttgaag ccccaacctt cactgtggag 3241 ctggggctgc taaggaagta attaaggtta cacgaagtca cagtggagaa tctgatctgc 3301 taagactggt gtccttatag ggagagaccc cagagagctt gttcccttcc tccctgtgca 3361 cacaaacaag agggcatggg agcacacaga gagatggcag ccacctacaa gccaagagga 3421 gaagcctcac aatgaacccc cccccccacc ctgctggcac ctatgtcttc gacttccagc 3481 ccccagactg tgagaaataa atttctgttg gttcagccat ccagtctcta gtgttttgtt 3541 attgcagcct gagaacacag ctgtatgatc attcatcaaa ctaaaaacac tgatacttaa 3601 caatgctaat gcaattactt atttgctttt cagtctctac aaaacattct aaaacactaa 3661 tctaaatact aacaataaaa tatttgcata actaatgaaa attaagaaac cacatgccca 3721 atattccatt tataagtaat cctatttggc tgatttccct ccatattgta agttttgaac 3781 ttttctgcca gtctttctcc tatttgtgtt aactcatgga attccagttg tctagccttg 3841 aaattgtagg ctcttctaac ttgagcaaaa tctgacagat cagcaaaata aggagaaaaa 3901 tatttcttct ttctttctgg ctgcattaaa tgagatacag ctcagcacca aaaagctatc 3961 tttgtaaatg ttcttagtaa actccctggt ctttggagtt atttcagcct ttgagagtaa 4021 ttctttaaaa gtctaattct gactggttga atctctctat atgatttatt gccctagtaa 4081 tatttgaaac agtatcatat tttaaaatat ataaatattt atgaattttt gttcagccca 4141 aagaggatta ctgatgcttt cttctttttc catatgatga ggaaatgttt agcttatata 4201 tttattgcat ttctgtttta aataaaaaat tgagagtttg tgtttcatta aactgaaaaa 4261 aaaggttctg taaaataaat gattaaatgg aggaaaagga gaagactgag gccagcaact 4321 ccatgataca gccaaaaatg agccagtaaa agattaagca agattaactg taaatttttt 4381 tttttttttt ttttaaagag aaaaggtctc actgtgtttc ccaggctgga gggtagtggt 4441 gtgatcatag ttcactagag ccctgaactc ctgggctcaa gtgatcctct tgccttagcc 4501 tcccattgct gggattatag gcatgagcca ctgtgtcagg cttaattggg ttttgatggg 4561 tacctgccta tctctgtaat ttggctctag tcatatagga cctgcttcat taaagatctg 4621 aaaatctatc cagccattgt aaaatgaaac aaaatgtttt gaaaatttaa attagccttt 4681 tattttagtt cagacatata gaaaagttgc aagcatagta cagaaagttc ctatataccc 4741 cacttagtgc cctccttttt aaaatttttt taaacctagc ttatttcctt taagatttct 4801 gagaattcca ggaatgctca cagatctgtc cttgtagtct cctgccactt cttgctatgg 4861 agtgctgtac caaggtctct gctagtttct agttggcttg acataatgac tttcctaaac 4921 ttcttctgct ctgaatctca agcatggaaa gcggtcacat cttttgtttc acgaattaac 4981 agtcaacacc tggccctact tttaacaaaa cttagtaaag ccttgagcat agtgaaagac 5041 aaatatttaa attatatatt agcaggaggc tgaggtggga ggatcatatg aggccagcct 5101 gggcagcata gcatgacccc cccctcgaga agacaacaaa aaattatctg ggtgtggtgg 5161 tgtgctcctg cagtcctagc tattccagag gccgaggcga gaggatcgct tgattccagg 5221 agttcaaggc tgtagttagc gataatcgtg tcactgaatc ctagcctggg caacagaata 5281 agaccccatg tctaacaaaa taataataaa acaatcaaaa gtttaaaatt agttattaaa 5341 tgtcagtgtg cccagagtcc tttgaccaca gatgatcctg atggccttct ctcgccttgt 5401 ccctgtgcct ccttctacca tttttcttcc tgagattcaa aagtaagtag cggacagggt 5461 tcccatttac cactaaatac ttcagtgggt gtttcctaaa aggacattta tagtaccatc 5521 atcaaaatca gtaaattaac cctgatacta ttatctaatc tgtagacttt attgaattat 5581 atcagttgtg cctcaagtgt ctttatgttt ttttctcaaa agagaaaaag ttctggtcca 5641 ggatttgatc taagatcatg cattgtattg agctttcctt tcttttaagt ctcatttaat 5701 ctggagatgt taatctgtct ttgtcatatc tttgacacta ttgaagagga ctggcctatt 5761 attttgcaga gtatctgatt ttgggtcatt tcatgtgttc tcatgattag attcaggtta 5821 tgcatttttg gcatgaattc catagaaggg ctgttacggt tctcagttca cggtattaga 5881 aggcacttga tagtgattag ttccattcct gatgatgtta actctgatca tttggataaa 5941 gtggcgtctg ccaggtttcc ctactgtgca gttacaattt gctttttgta attaataaag 6001 tgtgtgtgtg tgtgtgtgtg gagggggggt gtttttgctt ctgaacgcat aatatttgag 6061 atttttttct aattaaaaag taattattca aagagttcag agaactgata ctgatcacat 6121 tctttgaccc cacatgcaaa tacattataa actagtaata aaacggtaac tagaaaaatg 6181 ttcatatctt ttggaattaa aaaagtgttt aactcgtgga tcaaagcaga aattctgtaa 6241 ccattgtcac agcaggttct aacaagcaag tttaaggagg agagaatttc agtcctagag 6301 aatttcagtc ttattcaaat gctttcctag aaagaggaaa cagttcctaa ctaatttcat 6361 gaggctggca taatcttgat aacaagtctg ataggtaaag tatgaaagga aaattgcagg 6421 tcactcaatt atcactcaaa tatctacatg aaaaattcta aacaaaattt tagcaaacaa 6481 aatccaacaa tttgtaaaag tgataataca ccacgaccaa ggtggttcaa gtcaggaatt 6541 caacgttgat tttggcgtta aaaaatcaat catcaggccc agtgaggtgg ctcactcctg 6601 taatcccaga ctttctggag gctgaaggag gaaagatcct tcaggccaga agtttgagtc 6661 tgcactgagc tgtgactgca tcaccgcact ctagcctggg tgccagtttg agaccctgtc 6721 tccaagaaaa aaaaattaat cagtgtaatt caccacagat taagagttca aaagagaaaa 6781 atcacatgat catctgaata gaggaaaaag cttttgataa agttcaacat ccattcataa 6841 taaggactct cagcaactta gaagtataaa aacacttttg gaaatcaaca aagggaattt 6901 acagcatgaa caaacagcaa gccagcatgg tggctcacac ctgtaatctc agcacttcca 6961 gaggccaagg caggagaatc acttgagccc aggggttaga gacaagcctt ggcaacatag 7021 caagatcctg gctctacaaa aaataaaata aaatgaaata aaatttaaaa attagctggg 7081 tttggtggtg tgtgcctgta gtcccagcta ctgggaggct gaggtgagag gatcactgga 7141 gcccaggagg tgaaggctgc agtgggctaa aaacaaccag aacaaccccc caaccccctc 7201 cccgcaaaac actataaaga atagcaacac aaggttcaat gtaaactttg atatggtgtt 7261 ttacctctga ggagaggctt attgttaata ttctttagcc gtgtaagggg ttcacagatg 7321 ttcatacttt tgttctttat accttatatg tattctataa atattgtttc tactcaatag 7381 ttaataaaaa cataatttaa aagttc //
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