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PREDICTED: Sceloporus undulatus nuclear factor of activated T cells 5 (NFAT5), transcript variant X6, mRNA

NCBI Reference Sequence: XM_042480790.1

FASTA Graphics 

LOCUS       XM_042480790            8721 bp    mRNA    linear   VRT 19-JUL-2021
DEFINITION  PREDICTED: Sceloporus undulatus nuclear factor of activated T cells
            5 (NFAT5), transcript variant X6, mRNA.
ACCESSION   XM_042480790
VERSION     XM_042480790.1
DBLINK      BioProject: PRJNA746303
KEYWORDS    RefSeq.
SOURCE      Sceloporus undulatus (fence lizard)
  ORGANISM  Sceloporus undulatus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata;
            Toxicofera; Iguania; Phrynosomatidae; Phrynosomatinae; Sceloporus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_056529.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Sceloporus undulatus Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8721
                     /organism="Sceloporus undulatus"
                     /mol_type="mRNA"
                     /isolate="JIND9_A2432"
                     /isolation_source="the sample came from two individuals:
                     brain sample from one juvenile (IND9) and blood, liver,
                     muscle, tail, brain samples from one adult (Adult2432)"
                     /db_xref="taxon:8520"
                     /chromosome="8"
                     /sex="male"
                     /ecotype="Alabama"
                     /geo_loc_name="USA"
                     /lat_lon="31.0915 N 86.5454 W"
                     /collection_date="2016-08-14/2017-04-26"
     gene            1..8721
                     /gene="NFAT5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 15 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:121937529"
     CDS             620..5083
                     /gene="NFAT5"
                     /codon_start=1
                     /product="nuclear factor of activated T-cells 5 isoform
                     X4"
                     /protein_id="XP_042336724.1"
                     /db_xref="GeneID:121937529"
                     /translation="MYPVFTSELYTADASSAPSSSSMGGACSSFTTSSSPTIYSTSVT
                     DSKAMQVESCSSAMGVSNRGVSDKQLTNNTVQQQQQQQQQLSTPKRDTVLYISPPPED
                     LLDNSQMSCQDEGCGLESEQSCSMWVEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQ
                     RPGIKRRDCEESTMDIFDADSAKAPHYVLSQLSTDNKSNLKAGNGTSEAPKTTSGKKS
                     PMLCGQYPSKNEGKELKIVVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEP
                     VTLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAV
                     DCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNIPRKDGSSLTLQTPSSPILCTQ
                     PAGVPEILKKSLHTCSVKGEEEVFLIGKNFLKGTKVIFQENMSDENSWKAEAEIDMEL
                     FHQNHLIVKVPPYHDQKITAPVSVGIYVVTNAGRSHDIQPFTYTPDTSSTLNVNVKQE
                     ISSPTQPCSFDDAIKVNPSGCNLDKVNILPSALITPLRPNNIIKSEEAAPMELVPEKR
                     SPSVFKTTSVVGPSQAPLESGMPSLLGNSTFSSSASHLAPENEKQPLPPKVYTPEAMP
                     TLHTQDIVPPGSFPAASAGSQLQNSDTLLQQASPFPSRESQGPREMLQSDSAVMTLSQ
                     LTEVSQQQSPLQDSSQALQQQISANIFSSPGRVSQLQNTIQQLQAGTFQSSTASSNSG
                     NVDLVQQVLEAQQQLSSVLFSGSDNEDVQEQLNVEIFQQVSQIQNGVNQGMFSSDAVH
                     SRAEDLLSSRTENIHPQPESSLSSQQQQQQQQQQQQQQQAMETSAAMVIEIQQGLCQA
                     TSQMPSDLFSSSSSGNGNIQQSPVYQQASHLMGGLSTSEDMQMQCELFSSTNVSGNEG
                     ATPPQRQQVPANGSALFQSSGSTKGEEVSSQAEQLRNDVYQAMVQMQHGGEGQVQVSL
                     FSSSENMMQGNGAPPSQQQQPQPPPPPPSQGGGLFQQGGEMMSLQSGSFLQQAPHSQA
                     QLFHSQSPIGDGQNISQEAPSSLFHSQSTATSSEQLPPPIFHSQAPMGVVQEQQAGSM
                     FLSHSQNSMSGSVTREEPMTFFTTQNSISSLQASASAEQPASFQQQQQQQQAAQLSHL
                     QGSLLPPQEQPPPSQQGIFQSQVPLGALPPSGVPPNQQEAMYQSSHSMAALQNSTQEQ
                     QQQQQQQPNMHYSSQGPMGPMASPKQAMLFSSSPSSLTSQEQQQQSQSLFHPQNAMRT
                     MNQDQQPMQFQNQSPGSSQAEPSQQPPPALFHSSPQLQLVQGSPSSQEQPLTLFISST
                     SMSALQNSMSQQEMQQSSLYSSQSSMSGIQGTSSPPQQQQQQQQQQQQQQQQQQASLF
                     HNGPGGGAISQLQNSSASSQQTSGIFLFGIQENCGQLLTSGSGALSEQMITISQPQGE
                     VQPSVTTLLSQQMSENPQLSSAMTTNQNMKKIDDLLVSLQNQGNNNMAGSF"
ORIGIN      
        1 gaatctgtct atgaccttct ccccaaggag ctgcagttgc ccccttccag agaactctcg
       61 gccgcgtcca tgagtcaaac aagtggcggc gaggcaggct cacccccgcc gggtgtagtt
      121 gctgctggat ttgcctctga agcagggagt gtctgcatta aaaatgacct gtagttctct
      181 gcttcatagg ttagaaactt attttaatac tttgtggcta agcacagtcc catttttgga
      241 gaggaaaaaa aattgctcaa cgattggcat tgaaatgtgg cctaaaagcg atatatcttg
      301 cattgggatt tctatcattt tgtagaaaat ggcttaaatt gataaaccag ctgaggcaat
      361 aaaagcgccc ttgtttgctt gcagcctttg tatgacttaa tggacatttt tttaaaaatc
      421 tgattgccac acgcacaaaa atgaagctcc catttggaca ctgtttctga atatcactgt
      481 gttgcttaag cctttgtcgc ttgaagtgtt tacatttgaa aaagcaagcc aaattctaaa
      541 acattcattt gggggaaagg aattagtcca ccaatcacgt tatttcaaag ggactgctat
      601 agccagcaca gttgggatca tgtaccctgt atttacttct gaattgtaca ccgcagatgc
      661 ttcttcagct ccctcctctt cctccatggg cggtgcttgc agctccttta ccacctcttc
      721 cagccccacc atttactcta cctcagttac tgacagcaaa gctatgcaag tggagagctg
      781 ctcctcagcc atgggggtaa gtaaccgagg ggtaagtgac aagcagttaa ccaataacac
      841 agtccagcag cagcaacagc agcagcagca actgtccaca ccgaagaggg acacagtcct
      901 gtacatctcg ccgccaccag aggatctgct ggacaacagc cagatgtcct gccaggacga
      961 ggggtgcgga ttggagtccg agcagagctg cagtatgtgg gtggaggatt ccccctccaa
     1021 cttcagtaac atgagcacca gttcctacaa tgataacact gaggtgccgc gtaaatcacg
     1081 taaaagaaat ccaaagcaaa ggccggggat caaacggcgg gattgtgaag agtcaaccat
     1141 ggatatcttt gatgctgaca gtgccaaagc gcctcattat gtcctttctc agctcagcac
     1201 ggacaacaaa agcaacctga aagcaggaaa tgggacatcg gaagccccca aaacaacaag
     1261 tgggaagaag agccccatgt tatgtggcca gtaccctagc aaaaacgagg gcaaggagct
     1321 gaagatagtg gtgcagccgg agacccagca cagagctcgc tatctgacgg aaggcagccg
     1381 gggctcagtg aaagacagga cgcagcaagg attccccact gtcaagttgg aaggtcacaa
     1441 tgagcctgtg acactgcaag tgtttgtggg gaatgactct ggtcgagtga agccacatgg
     1501 attctaccag gcctgcaggg ttacaggacg aaacaccact ccctgcaaag aagtggacat
     1561 agagggcacc actgtcatcg aggtgggctt ggatccgagt aacaacatga ccctggcggt
     1621 ggactgtgtt gggatactga agctgaggaa tgcagatgtt gaagcccgaa taggcatcgc
     1681 tggatccaag aagaaaagca ctcgggccag gctggtgttc cgcgtgaaca tccctcggaa
     1741 ggatggctcc tctctcaccc tgcagacgcc atcctcacct attctgtgca ctcaaccagc
     1801 aggtgtacca gagatcctaa agaagagttt gcacacctgt tcagtgaagg gagaagaaga
     1861 agtctttctg attggcaaga atttcttgaa gggaaccaaa gtgatcttcc aagagaacat
     1921 gtctgatgag aactcttgga aggcagaagc agaaatagac atggaactgt ttcatcagaa
     1981 tcatctaatt gtaaaggtgc ccccatatca tgaccagaaa ataactgcac ctgtttctgt
     2041 ggggatctat gtggtgacca atgctgggcg atcccatgac atacagccat tcacttacac
     2101 tccggacaca tccagtactc tgaatgtgaa cgtgaaacag gaaatatcta gcccgacaca
     2161 gccttgctct tttgatgacg caatcaaagt gaaccccagt ggctgtaacc tggacaaggt
     2221 aaatattctt cccagtgcct tgataactcc actcaggcca aacaatatca ttaagagcga
     2281 agaggctgct ccaatggagc ttgtgcctga aaaaagatcc ccttcagtct ttaagacaac
     2341 cagtgtagtt ggtccctctc aagcacctct agagtccggc atgcccagcc tactgggaaa
     2401 cagcactttc tcctcttctg cttctcactt ggctcctgag aatgaaaagc agccactgcc
     2461 gcccaaggtg tatactccag aggcaatgcc taccctccat actcaggaca ttgtcccacc
     2521 tggcagcttc ccagcagctt ctgctggcag ccagctgcag aacagcgaca ccttgttgca
     2581 gcaggcatct ccattcccct caagagagtc ccaggggccc agagagatgc ttcagtctga
     2641 cagtgcagtc atgactttgt ctcagctgac agaggtttcc cagcagcagt caccgcttca
     2701 agactcgtcc caggctttac agcagcagat ctcggccaac atattttcat cacccggcag
     2761 agtgagtcag ctgcagaaca cgatccaaca actgcaagca gggacctttc agtccagcac
     2821 tgctagcagc aacagtggaa acgtggattt ggtccaacag gtcctggaag cacagcagca
     2881 gttgtcgtct gtcttgtttt cagggtctga caatgaggac gttcaagagc agctcaatgt
     2941 ggaaattttc cagcaggtca gccagatcca aaatggagtc aaccaaggga tgttttcctc
     3001 tgatgcagtc cactcgaggg ctgaagacct gctatccagc agaacagaga acattcatcc
     3061 acagcctgag agttctttgt ccagtcagca gcagcagcag cagcagcagc agcagcagca
     3121 gcagcagcaa gcaatggaga cttctgcagc aatggtgatt gagatccagc aaggcctctg
     3181 ccaggcaaca agccagatgc cgtccgactt gttctcctcc tcttcttcag gcaacggaaa
     3241 catccagcag tccccagtgt accagcaagc ttcccacttg atgggtggcc tgtccacaag
     3301 cgaagacatg caaatgcaat gtgagttgtt ctcttccacc aacgtttctg gcaatgaagg
     3361 agcaacgcca ccccaacggc agcaggtgcc ggccaacggc tctgccctgt ttcagtcttc
     3421 tggctccacc aaaggcgaag aagtatcaag ccaggcggaa cagttgcgga atgacgtcta
     3481 tcaggctatg gtccaaatgc agcacggcgg ggagggtcag gtgcaggtca gcctcttctc
     3541 ttcctccgag aacatgatgc aaggcaatgg agcaccaccg tcccagcagc agcaaccaca
     3601 gccaccgccg ccaccaccat cccagggtgg aggcctcttc cagcagggtg gggagatgat
     3661 gtccctccag tctggaagct tcttgcagca ggccccccac tctcaggctc agcttttcca
     3721 ctctcagagc cctatcgggg acggccagaa catctcccag gaggctccaa gctccctctt
     3781 ccatagtcag agcaccgcga cttcttcaga acagctgcca ccccccattt tccactcaca
     3841 ggcccccatg ggggttgttc aggagcaaca ggccggcagc atgtttcttt ctcattctca
     3901 gaattcaatg agtggctcag tcacacggga ggagcccatg acgttcttca ccacccagaa
     3961 ttcgatttct tctttgcagg cctctgccag tgctgagcag ccagcctcat tccagcaaca
     4021 gcagcaacaa cagcaggcgg ctcagctctc ccacctccag gggtctctgc ttcctccgca
     4081 ggagcagcct ccgccttcac agcagggcat tttccagtca caagtgcccc tgggtgcact
     4141 ccctccttca ggtgtgcccc caaaccaaca agaagccatg taccagtcct cacattcaat
     4201 ggcagctctt cagaacagca cacaagagca gcagcagcag caacagcaac agccaaacat
     4261 gcattacagc agccagggcc ccatgggccc catggcatcc ccgaagcagg ccatgctgtt
     4321 cagctccagc cccagctccc tgaccagcca ggaacagcag caacagagcc agtctctctt
     4381 ccacccacag aacgccatga ggaccatgaa tcaggaccag caacccatgc agttccagaa
     4441 ccagagccca ggctcctccc aagctgagcc gtcccagcag ccaccgccgg ccttattcca
     4501 cagctcccca cagctgcagc tggtccaagg ttctcccagc tcccaagagc agcctctcac
     4561 ccttttcatc tcatcaactt ccatgtctgc cttacagaac agcatgagcc agcaggagat
     4621 gcagcagtcc tccctctatt cttcacagag cagcatgtct ggcatccagg gtacttcttc
     4681 acccccacaa cagcaacaac agcagcaaca acagcagcag cagcaacaac aacaacagca
     4741 agcttccttg ttccataatg gccctggagg tggtgccatc agccagctgc agaattcatc
     4801 tgcttcatct cagcagacct ctggaatatt tctttttggc atccaagaga actgtggcca
     4861 gctcttaaca tctggatctg gtgcgttgtc tgaacagatg atcaccatta gccagccaca
     4921 aggggaggtg cagccttctg tcactaccct cctgtctcag cagatgtcag agaaccccca
     4981 gctgtcttcg gccatgacca ccaatcagaa tatgaagaag atcgatgacc tgcttgtgtc
     5041 cttgcaaaac caggggaaca ataacatggc cggctccttc taactggtca gaaatcctgt
     5101 gatggacagg cagatttgca agactccttt agttcttgtg actctgaaat ttagggtgtt
     5161 tggacttcaa cttcctcatt caaaagatgg tctggaccta agggaaaaca tagccttcac
     5221 ccttgctttg gaggagcatc cctgctgatc ctgggaaaca gctgttgtga aagagcatct
     5281 gagagagaga cgtcttggaa ccaagagcag tggaagagct gtgctttgtg ttgctcaagc
     5341 tgaaggctgg gcagttaccc ccatctctag cccctctgag gggatacaga gcatgaatgc
     5401 tcagttatca gttggagcta ggtaaggaaa gaaaatggga ccgtgtgtct ccccaccctc
     5461 ctctctttct agcctccgcg gctcttcagt gggagctgtg aaacatacag aaatatcctg
     5521 ggtcccaaaa tcaattggtt gcacagatgt ctggttcaca cacttgtatt cgtcatttga
     5581 tgacttatcc cgtgatttac agttgaatat ttctgtgatt tccattgaaa acggtttctt
     5641 gaggcaatgt gaagtaacac aagtgttcag tccatagttg tgaatttcac acgtgtgcat
     5701 catcgcttga tgctggaggt ggtgaacctc caggtgtgaa ctgagcccct ctgttgagta
     5761 gaaatttctg ctgacttaat agaaatgggg aaagctgtga aataacgctg ggggtggtca
     5821 gcacatgcta catagaacct gagagtctcc catggctttg aggtacagcc ttaaggagtg
     5881 gggctggaag gggtctgtgt gctggggcag tgttgggggg ggtgggatcc aagaatgtga
     5941 ccgcagcttc ttccggaagg gctgggtgta aactaataga gctgctgaaa ggagagggac
     6001 tatcctaaat tcctggtgct ctgccagtct ccccactggg aaggacaagg cttgctcaac
     6061 ggtttctctc tgagtcctgc ctccattggt tatgagctga atcctcaccc ccttaatccc
     6121 ctttctgttt ccttgtctct tcttgtaaat atgctgccat ctcttgaaac ctgagctagc
     6181 tttttaggag accagagagc cccagggctg gtagaggtcc agggctggac tcagcagagt
     6241 gagcaggtgg gctccaacgt gccacgggga tgggctcacc atgttctgaa cccatgcagc
     6301 caccgaaaga aaaagggaac ctgcaaaact ggcaggccct gagtcactta agttctctct
     6361 ctctctctct ctctctcaca cacacataca cacacacaca cggttgctgg gggacaagaa
     6421 ggggctaatg ggcaagccct tctgtggagt gggaaagtgt ttgcattcag tttggttttt
     6481 gcgtgccacc caccttcctt tcccccctaa cttgtgctgg tgtgaagtct taaagtgaag
     6541 cccagatatg aggccaggga agagtgtcag ttccttttgg gccttggggc tgtagctccc
     6601 tcccagcagt ccctttgtaa aacacagagg agggcagtgg tggtgcattt gcacccatgc
     6661 cctgccgttc ccccccccct tgaactcaat accccagggg cagactccgt ttcaggtgct
     6721 ctccggggag cgctcgtcca agcctccctc ttccggattt ctgcttcttt ttctctcctg
     6781 cacatcctac gctgttgcgt ggtgtcagtc gcacaacagc ttctatgtgt agctttcttt
     6841 ggccttaggg aatgtgggtt tttttagtat gtgttggtgt ccatttttgt tcctcttgtg
     6901 gaatggtttt ccaggttcct cctcgtgtgt tttttctgag gtgtgtcacc ttgagctacg
     6961 tagagtcctg cttgggtttg ggaggggggt cattttggtt ctggttcttg tccagctaaa
     7021 tgcaagtcca tcacgactga tttttgcagt gagtagtttg gtctgtctgt ctgtctgtct
     7081 gtctctcctt gagaggctca agttatgttt tcagtagtac aggctatttt gccgatatga
     7141 agggaacttt tcagaaagag acctgctcta ggtcatttaa ttttgaatac agttttcaat
     7201 tgttcaagtt ttggatggtt tatatctaat gtgtgtttca ttattttttt tggaaagctc
     7261 tattttgtat ttaggaaatg aactattttg ctatttgtac tgagtgagta cattggcata
     7321 actatagact ataaatatac atatatatat atatgtacat gtatatatat atatttgcat
     7381 atattcacac acatatattc tccttgccac agatttttgt ggtaaatgtg tgagttttat
     7441 tgtctgttct cccacaacat ggtgtctagt agttggggga cggggttggg gtttgttaag
     7501 tctttgcaaa gtattctaag tacttttttt gcagcgaacg tagtcgtgtt catctctggc
     7561 cattccatca ggcagcatct gtactgattg gctatgaggg cagcttcgtt gccaaagtgg
     7621 caggtctcac ttggcagtgt gacctagtgg gcaaatcccc cggggcaact tcttcggggg
     7681 ctggcgggtt ccattcagca tgagccattc agcttttact cattgttcat gtctaatatt
     7741 ttattgccag ctttttaatt tataataaca ctacagactc agattgaagc ctgtggcttt
     7801 tctctgtccc ataatgtctg catagctccg gtgggaatgg ttaagacgtg aaggagcagc
     7861 cacacaggtg cctcttccag acaggaataa gtggcagaag ggatggacaa gggatgggca
     7921 atggcttctc ttttagcttt tgggggaacc cgtggctgtg ccctaaacag aggatttctt
     7981 ctggaagaga cgtttcatcc caggcctcag tggctgcata gggctgaagt gtccagtgag
     8041 agacaagtaa ggagcagttt agccaattcg ctgacctgga ctgtgtccac cgctgtcgca
     8101 gggctgcttc tgggggacga ggacgaggca ccagggacca atctatccta ggctgaacca
     8161 agtcttctgc ccaagtcctg ccagccactt ctccccagat gtttccggct gtacagcggt
     8221 ggggcatcca tctatcctct gtctgtcaga aaggctccct ttgtggctgc tcacttaaaa
     8281 tggcagcact catgtttcta gggttggttt taattcctgc tttttccttg gtccatttta
     8341 ggtcaatatt taaatgtgca acattttgaa tttatgtggt ttggttacaa aaagtgtgtc
     8401 tttggaacca agaagctgct cggtggctgc cagagactgg cgctgcatct ttcctataga
     8461 ttttatcggg gtgatggcga gaggcagagg gggcctacta agatggagag gcaggtttcc
     8521 tggggccctc tgaggtatgt ctttctgtcc cattttcact cccccatggc agttaggagc
     8581 tcctcatatt tgcctgggcc attttacaag cttgttgcaa acaagcttgt aaaacgtgga
     8641 ctacacaagg taactgttac atgggtttgt aactggttga ccggccgaac ccaaagggtg
     8701 ttcaacaatg gctccttttc a
//
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