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NCBI Reference Sequence: XM_028829011.1
FASTA Graphics
LOCUS XM_028829011 4408 bp mRNA linear PRI 26-APR-2019 DEFINITION PREDICTED: Macaca mulatta ubiquitin specific peptidase 15 (USP15), transcript variant X4, mRNA. ACCESSION XM_028829011 VERSION XM_028829011.1 DBLINK BioProject: PRJNA528504 KEYWORDS RefSeq. SOURCE Macaca mulatta (Rhesus monkey) ORGANISM Macaca mulatta Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_041764.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Macaca mulatta Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4408 /organism="Macaca mulatta" /mol_type="mRNA" /isolate="AG07107" /bio_material="Coriell:AG07107" /db_xref="taxon:9544" /chromosome="11" /sex="female" /tissue_type="fibroblast" gene 1..4408 /gene="USP15" /note="ubiquitin specific peptidase 15; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 214 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 185 samples with support for all annotated introns" /db_xref="GeneID:716793" CDS 152..2647 /gene="USP15" /codon_start=1 /product="ubiquitin carboxyl-terminal hydrolase 15 isoform X3" /protein_id="XP_028684844.1" /db_xref="GeneID:716793" /translation="MFVKHCKVEVYLTELKLCENGNMNNVVTRRFSKADTIDTIEKEI RKIFSIPDEKETRLWNKYMSNTFEPLNKPDSTIQDAGLYQGQVLVIEQKNEDGTWPRG PSTPNVKNSNYCLPSYTAYKNYDYSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNT PPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGR FAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAEEAWENH LKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERTLEVYLVRMD PLTKPMQYKVVVPKIGNILDLCTALSALSGIPADKMIVTDIYNHRFHRIFAMDENLSS IMERDDIYVFEININRTEDTEHVIIPVCLREKFRHSSYTHHTGSSLFGQPFLMAVPRN NTEDKLYNLLLLRMCRYVKISTETEETEGSLHCCKDQNINGNGPNGIHEEGSPSEMET DEPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEDTCKGQLTGHKKRLFTFQF NNLGNTDINYIKDDTRHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDFEKHE SVEYKPPKKPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLV VHLKRFSYSRYMRDKLDTLVDFPINDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGG HYTAFAKNKDDGKWYYFDDSSVSTASEDQIVSKAAYVLFYQRQDTFSGTGFFPLDRET KGASAATGIPLESDEDSNDNDNDIENENCMHTN" ORIGIN 1 ctctctttct catttctcac tcgggggaat tcaactgcat atggcgagga cactcaggca 61 gcctatggag aggcccacat ggtgaggaac tgagatctct ggccaataga gaggaacgga 121 ggcctgcaac aaccatgtgg ttgaacaggg tatgtttgta aagcactgca aagtagaagt 181 atatctcaca gaattgaagc tatgtgaaaa tggaaacatg aacaatgttg taactcgaag 241 atttagcaaa gctgacacaa tagatacaat tgaaaaggaa ataagaaaaa tcttcagtat 301 tccagatgaa aaggagacca gattgtggaa caaatacatg agtaatacat ttgaaccact 361 gaataaacca gacagcacca ttcaggatgc tggtttatac caaggacagg tattagtgat 421 agaacagaaa aatgaagatg gaacatggcc aaggggtcct tctactccta atgtgaaaaa 481 ctcaaattac tgtctcccat catatacggc ttataagaac tatgattatt cagaacctgg 541 aagaaacaat gaacagccag gcctctgtgg cctaagtaac ttgggaaata cgtgtttcat 601 gaactcagct attcagtgtt tgagcaacac acctccactt actgagtatt tcctcaatga 661 taagtatcaa gaagaactga attttgacaa tcccttagga atgagaggtg aaatagctaa 721 atcttatgcc gaactgatca agcaaatgtg gtctggaaag tttagctacg tcaccccaag 781 agcctttaag acacaggtag gacgttttgc acctcagttc tctggatatc agcagcaaga 841 ctgtcaagaa ctattagctt tcctattaga tggattacat gaggatttga atagaattag 901 gaaaaaacca tatatacaat taaaagatgc agatggaagg ccagataagg tggttgccga 961 agaagcctgg gaaaaccatt taaaacgaaa tgattctatc atagtagata tatttcatgg 1021 ccttttcaaa tcaactttag tttgtcctga gtgtgctaag atttcagtaa catttgatcc 1081 tttttgttac ttgacacttc cattgcccat gaaaaaagaa cgcactttgg aagtttactt 1141 agttagaatg gatccgctta ccaaacctat gcagtacaaa gtggttgtcc ccaaaattgg 1201 aaatatatta gatctttgta cagcattgtc tgctttgtca ggaatacctg cagataagat 1261 gatagttact gatatataca atcatagatt tcacagaata ttcgctatgg atgaaaacct 1321 tagtagtatt atggaacggg atgatattta tgtgtttgaa attaacatca ataggacaga 1381 agatacagag catgtgatta ttcctgtttg cctaagagaa aaattcagac actcaagtta 1441 tacccaccat actggttctt cactttttgg tcagcctttt cttatggctg taccacgaaa 1501 caatactgaa gacaaacttt ataatctcct gctcttgaga atgtgccgat atgtcaaaat 1561 atctactgaa actgaagaaa ctgaaggatc cctacactgc tgtaaggacc aaaatattaa 1621 tgggaatggc ccaaatggca tacatgaaga aggctcacca agtgaaatgg aaacagatga 1681 gccagatgat gaatccagcc aggatcaaga acttccctca gagaatgaaa acagtcagtc 1741 tgaagattca gttggaggag ataatgattc tgaaaatgga ttatgtactg aggacacttg 1801 caaaggtcaa ctcacgggac acaaaaaacg attgtttaca ttccagttca acaacttagg 1861 caatactgat atcaactaca tcaaagatga taccagacat ataagatttg atgataggca 1921 gcttaggcta gatgaaagat cttttcttgc tttggattgg gatcctgatt tgaaaaaacg 1981 atattttgat gaaaatgctg ctgaggactt tgaaaaacat gaaagtgtgg agtataaacc 2041 tcctaaaaaa ccctttgtga aattaaaaga ttgcattgaa ctttttacaa caaaagaaaa 2101 gctaggtgct gaagatccct ggtattgtcc gaattgtaaa gaacatcagc aagccacaaa 2161 gaaattggat ttatggtcct tgcctccagt acttgtagta catctcaagc gattttctta 2221 cagtcgatac atgagagaca agttggatac cttagttgat ttccctatca atgacttgga 2281 tatgtcggaa ttcttaatta atccaaatgc aggtccttgc cgctataatt tgattgctgt 2341 ttccaaccac tatggaggga tgggaggagg acactatact gcttttgcaa aaaataaaga 2401 tgatggaaaa tggtactatt ttgatgacag tagtgtctcc actgcatctg aagaccaaat 2461 tgtgtccaaa gcagcatatg tactcttcta ccagagacaa gacactttca gtggaactgg 2521 cttttttcct cttgaccgag aaactaaagg tgcttcagct gccactggca tcccattaga 2581 aagtgatgaa gatagcaatg ataatgacaa tgatatagaa aatgaaaact gtatgcacac 2641 taactaatga aagtcctaga agccataaaa gagagacttt cctgctggtg gtatctatgg 2701 aaatgatgaa gttacccacc acattaaaac aaaagtctga gatggggagt ttcagataac 2761 cgaatgtaaa tcctttatca gattttaact tgtgcagtac ttgaagtgaa acacaatgaa 2821 aactttaaca gaaattgtct cttaatacat ttacagtctt gtatttacaa gctaaatata 2881 tataggaaat cacaaataaa tcccttttaa gtttgctgct gttttgatta attatgtttc 2941 ctttaatttt ttggatgtga gttgatgaca aatgttaaat ttgtggatgt tggtccttta 3001 ttttgctcta ataatactgc aagaaaacta tggctgaact tagtttttgg ataatctagt 3061 tcatgtgcat taggctgcca tacatactac tatgatattt agctgcagta tcaatgtggc 3121 ataaatactg cggcagcatt cttcaaaaac cacagtttca aatttatccc ggtaatcaat 3181 gtgggcctat taaaaaacca aatcatgata cgagaaacaa ccttggaaaa gctatttcct 3241 tttgtagtac cattaaaaat ccagaatatt atattcattt tactgccact gtggaaacag 3301 gttctagatt tcatactcca tctaaagtca tttttcagtt acatgtaagt attatttact 3361 gctattggga tctattcttc agacattcag aaacattttt tgctttaaaa tgcatatctt 3421 taattgggtg ttggtccaaa attaaaattt ttgctgtctg tttttctcta ccccattttg 3481 tggtaatttg gcaactttag ctctcccaat tattgtaata taaggacaga cttaatagta 3541 ttctgtatcc atagtaataa ttgcatcaag cttaaatgag aaattttttt catatactgg 3601 cctttaaatc attaatggac aattggctat aaaggtaggt ctgttaactt tctttgtgtg 3661 ttcctgatgg aattcaccat agccttacag cttttctcag aaggtaactt gttataagag 3721 aaatggcatt tgcatgttcc agagtcagaa cctgtacagt atatacagca taaacacctt 3781 gaatttgatt ttagttcacc acattcaagg atccaggatg ccaaaaatat gtgtgaacat 3841 ttgaaacatt tttatttgct gctttttccc tttgatctag ttgaaagaat gtattgtaaa 3901 ttggcataca atactgcctt taatagaaaa cctaaatgct ggggcacatt tcacatatcg 3961 actacctgag aaattgcttt gtgtcccact gttattaaag caaaaagtat aatgttcttc 4021 acttgaacta atcaaataca atagattata aattgtgtat tgtaaataaa agttcactct 4081 gtgagtgcac attttggtaa attatttatt tatgttagca tttaaaagtt ttaaaaaaat 4141 gcatttgacc aggataaatg aggtatgttg atcatggctt tgctttatat cttgatatta 4201 aagctggttt atcatcctgg tattttaaaa gctgctttgg gtttttttgt tttttggttt 4261 tttttttttc tttttttctt ttttaatgta aactaacctc ctgcatgaca gaggttaaaa 4321 ttttgtctgc acttgagttc acttgagttt acatttgaaa tgtgcatgtt tatttataca 4381 gatttcaata aagctattca aggcctta //
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