U.S. flag

An official website of the United States government

PREDICTED: Macaca mulatta heat shock protein family A (Hsp70) member 4 (HSPA4), transcript variant X2, mRNA

NCBI Reference Sequence: XM_015140776.2

FASTA Graphics 

LOCUS       XM_015140776            4775 bp    mRNA    linear   PRI 26-APR-2019
DEFINITION  PREDICTED: Macaca mulatta heat shock protein family A (Hsp70)
            member 4 (HSPA4), transcript variant X2, mRNA.
ACCESSION   XM_015140776
VERSION     XM_015140776.2
DBLINK      BioProject: PRJNA528504
KEYWORDS    RefSeq.
SOURCE      Macaca mulatta (Rhesus monkey)
  ORGANISM  Macaca mulatta
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Cercopithecidae; Cercopithecinae; Macaca.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_041759.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 23, 2019 this sequence version replaced XM_015140776.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Macaca mulatta Annotation Release
                                           103
            Annotation Version          :: 103
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4775
                     /organism="Macaca mulatta"
                     /mol_type="mRNA"
                     /isolate="AG07107"
                     /bio_material="Coriell:AG07107"
                     /db_xref="taxon:9544"
                     /chromosome="6"
                     /sex="female"
                     /tissue_type="fibroblast"
     gene            1..4775
                     /gene="HSPA4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 26 mRNAs, 504 ESTs, 21 long SRA
                     reads, 14 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 70 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:709585"
     CDS             314..2788
                     /gene="HSPA4"
                     /codon_start=1
                     /product="heat shock 70 kDa protein 4 isoform X2"
                     /protein_id="XP_014996262.1"
                     /db_xref="GeneID:709585"
                     /translation="MSIATAARRKCGPGRPRALGACISFGPKNRSIGAAAKSQVISNA
                     KNTVQGFKRFHGRAFSDPFVEAEKSNLAYDIVQLPTGLTGIKVTYMEEERNFTTEQVT
                     AMLLSKLKETAESVLKKPVVDCVVSVPCFYTDAERRSVMDATQIAGLNCLRLMNETTA
                     VALAYGIYKQDLPALEEKPRNVVFVDMGHSAYQVSVCAFNRGKLKVLATAFDPTLGGR
                     KFDEVLVNHFCEEFGKKYKLDIKSKIRALLRLSQECEKLKKLMSANASDLPLSIECFM
                     NDVDVSGTMNRGKFLEMCNDLLARVEPPLRNVLEQTKLKKEDIYAVEIVGGATRIPAV
                     KEKISKFFGKELSTTLNADEAVTRGCALQCAILSPAFKVREFSITDVVPYPISLRWNS
                     PAEEGSSDCEVFSKNHAAPFSKVLTFYRKEPFTLEAYYSSPQDLPYPDPAIAQFSVQK
                     VTPQSDGSSSKVKVKVRVNVHGIFSVSSASLVEVHKSEENEEPMETDQNAKEEEKMQV
                     DQEEPHVEEQQQQTPAENKAESEEMETSQAGSKDKKMDQPPQAKKAKVKTSTVDLPIE
                     NQLLWQIDREMLNLYIENEGKMIMQDKLEKERNDAKNAVEEYVYEMRDKLSGEYEKFV
                     SEDDRNSFTLKLEDTENWLYEDGEDQPKQVYVDKLAELKNLGQPIKIRFQESEERPKL
                     FEELGKQIQQYMKIISSFKNKEDQYDHLDAADMTKVEKSTNEAMEWMNNKLNLQNKQS
                     LTMDPVVKSKEIEAKIKELTSICSPIISKPKPKVEPPKEEQKNAEQNGPVDGQGDNPG
                     PQAAEQGTDTAVPSESDKKLPEMDID"
ORIGIN      
        1 ttctccgccc ccgctaccgg cgcctcctct gcggccactg agccggagcc ggcctgagga
       61 gcggtctcgg ttgcagtccc cactggaagg acctaggcgc tcgcgtggac gccgcacgcc
      121 cctcagtagc ctcggcccaa gaggcctgct ttccacgcgc tagccccgcc ggggtccgtg
      181 tcctgtctcg gtggccggac ccgggcccga gcccgagcag tagccagcgc catgtcggtg
      241 gtgggcatag acctgggctt ccagagctgc tacgtcgctg tggcccgcgc cggcggcatc
      301 gagactatcg ctaatgagta tagcgaccgc tgcacgccgt aagtgtgggc cgggccggcc
      361 gcgtgcactg ggggcttgca tttcttttgg tcctaagaat cgttcaattg gagcagcagc
      421 taaaagtcag gtaatttcga atgccaagaa cacagtccaa ggatttaaaa gattccatgg
      481 ccgagcattc tctgacccat ttgtggaggc agaaaaatct aaccttgcat atgatattgt
      541 gcagttgccc acaggattaa caggtataaa ggtgacatat atggaggaag agcgaaattt
      601 taccactgag caagtgactg ctatgctttt gtccaaactg aaggagacag ccgaaagtgt
      661 gcttaagaag cctgtagttg actgtgttgt ttcggttcct tgtttctata ctgatgcaga
      721 aagacgatca gtgatggatg caacacagat tgctggtctt aattgcttgc gattaatgaa
      781 tgaaaccact gcagttgctc ttgcatatgg aatctataag caagatcttc ctgccttaga
      841 agagaaacca agaaatgtag tttttgtaga catgggccac tctgcttatc aagtttctgt
      901 atgtgcattt aatagaggaa aactgaaagt tctggccact gcatttgacc caacattggg
      961 aggtagaaaa tttgatgaag tgttagtaaa tcacttctgt gaagaatttg ggaagaaata
     1021 caagctagac attaagtcca aaatccgtgc attattacga ctctctcagg agtgtgagaa
     1081 actcaagaaa ttgatgagtg caaatgcttc agatctccct ttgagcattg aatgttttat
     1141 gaatgatgtt gatgtatctg gaactatgaa tagaggcaaa tttctggaga tgtgcaatga
     1201 tctcttagct agagtggagc caccacttcg taatgttttg gaacaaacca agttaaagaa
     1261 agaagatatt tatgcagtgg agatagttgg tggtgctaca cgaatccctg cggtaaaaga
     1321 gaagatcagc aaattttttg gtaaagaact tagtacaaca ttaaatgctg atgaagctgt
     1381 cactcgaggc tgtgcattgc agtgcgccat cttatcgcct gccttcaaag tcagagaatt
     1441 ttctatcact gatgtagtac catatccaat atctctgaga tggaattctc cagctgaaga
     1501 agggtcaagt gactgtgaag tcttttccaa aaatcatgct gctcctttct ctaaagtcct
     1561 tacattttat agaaaggaac ctttcactct tgaggcctac tacagctctc ctcaggattt
     1621 gccttatcca gatcctgcta tagctcagtt ttcagttcag aaagtcactc ctcagtctga
     1681 tggctccagt tcaaaagtga aagtcaaagt tcgagtaaat gtccatggca ttttcagtgt
     1741 gtccagtgca tccttagtgg aggttcacaa atctgaggaa aatgaggagc caatggaaac
     1801 agatcagaat gcaaaggaag aagagaagat gcaagtggac caggaggaac cacatgttga
     1861 agaacaacag cagcagacac cagcagaaaa taaggcagag tctgaagaaa tggagacctc
     1921 tcaagctgga tcaaaggata aaaagatgga ccaaccaccc caagccaaga aggcaaaagt
     1981 gaagaccagt actgtggacc tgccaattga gaatcagcta ttatggcaga tagacagaga
     2041 gatgctcaac ttgtacattg aaaatgaggg taagatgatc atgcaggata aactggagaa
     2101 ggagcggaat gatgctaaga atgcagtgga ggaatatgta tatgaaatga gagacaagct
     2161 tagtggtgaa tatgagaagt ttgtgagtga agatgatcgt aacagtttta ctttgaaact
     2221 agaagatact gaaaattggt tgtatgagga tggagaagac cagccaaagc aagtttatgt
     2281 cgataagttg gctgaattaa aaaatctagg tcaacctatt aagatacggt tccaggaatc
     2341 tgaagaacga ccaaaattat ttgaagaact agggaaacag atccaacagt atatgaaaat
     2401 aatcagctct ttcaaaaaca aggaggacca gtatgatcat ttggatgctg ctgacatgac
     2461 gaaggtagaa aaaagcacaa atgaggcaat ggagtggatg aataacaagc taaatctgca
     2521 gaacaagcag agtttgacca tggatccagt tgtcaagtca aaagagattg aagctaaaat
     2581 taaggagctg acaagtattt gtagccctat aatttcaaag cctaaaccca aagtggaacc
     2641 tccaaaagag gaacaaaaaa atgcagagca gaatggacca gtggatggac aaggagacaa
     2701 cccaggtccc caggctgctg agcagggtac agacacagct gtgccttcgg agtcagacaa
     2761 gaagcttcct gagatggaca ttgattgatt ccaacacttg tttctattaa aacagactat
     2821 tataaagctt taagttgtca actttgttct aaatatcaac tagagcaagt gaatactgaa
     2881 gatttcttag tcagttttta ggggattttc ggggagggga aataggtaat gtatggagca
     2941 ttttgacttc taaatagtta gatacagaaa ttaagtgcat tgtatctttt tcataatggt
     3001 actatttaga agcccagtta gtcttactga gctaatgctt cactccttta tgtttaacca
     3061 tgtgtctaca agaataagtt tgttttggaa agttgagcta tagctacagc tctagctatc
     3121 cggcagactt ttcattatga cttacatggc aggagctcta attatgcttt aaaaatctgt
     3181 tgtggagata gctctaaagg ctccctgcct ggtgtgggga tggggtctcc ctctttgtga
     3241 gggttggagc atggcacagc atggattaac acgggagagg aacaaaggtg tgctctgaac
     3301 gtcttcatat ttcaccttca ccctcacctg tgttctgttc cctatctccc aataaaaggg
     3361 ctcccattat aaatgccatg tacttctctt gggaaaatag acccccttgc ctagagtaag
     3421 ttgttaactg agggctttaa acctggaggc tctttctgaa agtttgttca cgaatacccc
     3481 aatcatcagg gtctaaataa ttttcagaag attagaattg ggtagatata ctgttggaga
     3541 tagccatggt aaatttaact gaggaattaa atccttgtta attttggtgt aaagatttgt
     3601 atcctggcct gtttattcag gtgggagatg ttctgtataa ttttgaggta tagcttgaac
     3661 tcctaggaca agagttaaaa gttcttttta gctcattcac aatcacttgt gtgttgtgtt
     3721 aatatctatc atgaacctgc caatttgtac atgttaagca gctgacagat gatagaaaaa
     3781 aactaagata cactggattg tactggatga gtctgaaatt agtgttaaag aagtgtggtg
     3841 cctgatgtta taacaacacc tcattcttaa ctgtgtggcc agtgtcaggt ataccaaagc
     3901 attcctctga ctgctttttg gggcagtgtt gacaggagtg aggcattttg gaaactccaa
     3961 gggaagcctg tgtttgaggc cagagttggt acctgcttta agaaactgtt aaaagacttg
     4021 ttggtaatgt tttggatctt tgtaaaaatt gatattctgt ataacagagt gcctctctgt
     4081 tacttttggc ctatgttgtt agaaataaga tgatatgttg catagttaga attaagcgtt
     4141 tgtccatctc tagatacatc gaaaagtttg agtgttacag gctctcaagt gctacagaga
     4201 aaaattgctt aggaggagga aggggaaagt atacttacac tggtgtgtaa gcacgcatgg
     4261 aagcctcgtg gcaccgcaac aaggccctgt tcttagcaca tctctgttct ctacctgtca
     4321 tgcttcaaga gttccagctg gcctgctgtg aagccaatag ctattttaaa agtgctggct
     4381 gcaggattaa gccaaccctt gtacaactgg ccaagtcctt aatggccatt tcttctaaaa
     4441 aaaaaaaaaa ttgtttttgt tttttttttg gtgtgtgtgt gtgtggtggg ggaagggtgt
     4501 gggtgttggg atggggtgaa tttgaagttg aaacaagatg atgtggtcta cttgctctct
     4561 gcttagacag actttaagac cagttggatt ttcatggagg ccaggacaga gagaggtaat
     4621 tgatggcttg tgtagagaca agcatttatc caggttgcgt tatccaaact gatttgttaa
     4681 agctccaggt cacattctta cactaagaaa atcattcagt aaacatgaga caagtttagg
     4741 aaaaattaat aaagtaaacc tgtcttacac ttgaa
//
Feature
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

Reference sequence information

More about the HSPA4 gene

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.