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PREDICTED: Macaca mulatta SPT20 homolog, SAGA complex component (SUPT20H), transcript variant X21, mRNA

NCBI Reference Sequence: XM_015120943.2

FASTA Graphics 

LOCUS       XM_015120943            3073 bp    mRNA    linear   PRI 26-APR-2019
DEFINITION  PREDICTED: Macaca mulatta SPT20 homolog, SAGA complex component
            (SUPT20H), transcript variant X21, mRNA.
ACCESSION   XM_015120943
VERSION     XM_015120943.2
DBLINK      BioProject: PRJNA528504
KEYWORDS    RefSeq.
SOURCE      Macaca mulatta (Rhesus monkey)
  ORGANISM  Macaca mulatta
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Cercopithecidae; Cercopithecinae; Macaca.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_041770.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 23, 2019 this sequence version replaced XM_015120943.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Macaca mulatta Annotation Release
                                           103
            Annotation Version          :: 103
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3073
                     /organism="Macaca mulatta"
                     /mol_type="mRNA"
                     /isolate="AG07107"
                     /bio_material="Coriell:AG07107"
                     /db_xref="taxon:9544"
                     /chromosome="17"
                     /sex="female"
                     /tissue_type="fibroblast"
     gene            1..3073
                     /gene="SUPT20H"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 mRNAs, 319 ESTs, 4 long SRA
                     reads, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 166
                     samples with support for all annotated introns"
                     /db_xref="GeneID:696174"
     CDS             246..2681
                     /gene="SUPT20H"
                     /codon_start=1
                     /product="transcription factor SPT20 homolog isoform X8"
                     /protein_id="XP_014976429.1"
                     /db_xref="GeneID:696174"
                     /translation="MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSVFQKLYDLY
                     IEECEKEPEVKKLRRNVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETI
                     RLPYEEGELLEYLDAEELPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQ
                     SRHILLRPTMQTLICDVHSITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCT
                     ANRLLYNKQKMNTRPMKRCFKRYSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAG
                     QHYDLKISKAGNCVDMWKRSPCNLAIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVK
                     DDYVFECETGTQYQKTKLTILQSLGDPLYYGKIQPCKADEESDSQMSPSHSSTDDHSN
                     WFVIGSKTDAERVVNQYQELVQNEAKCPVKMSHSSSGSASLSQVSPGKETEQTETVSV
                     QSSVLGKGVKHRPPPIKLPSSSGNSSSGNYFTPQQTSSFLKSPTPPPSSKPSSIPRKS
                     SVDLNQVSMLSPAALSPASSSQRSGTPKPSTPTPTPSSTPHPPDAQSSTPSTPSATPT
                     PQDSGFTPQPTLLTQFAQQQRSLSQAMPVTTIPLSTMVTSITPGTTATQVMANSAGLN
                     FINVVGSVCGAQALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAMQAAS
                     QAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQQLSQFTPQQPQQPTTASPQQP
                     GEQGSEQGSTSQEQALSAQQAAVINLTGVGSFMQSQAAAVAILAASNGYGSSSSTNSS
                     ATSSSAYRQPVKK"
ORIGIN      
        1 gccttccccg ccccccggcc cagcccgcca gtcggaagtg cggccaccgg aacaggccgt
       61 tggtgtgggt gcagcacgca gcggccgagg gggcgggtgg gctttgcggc cgagcaggcg
      121 gcgccgtctt agcggcaagg cgacccgcac agtactgtaa gattgatgtt aaagacatgg
      181 tgttcacccc acttcatcag cgtacataag ttatctcttc ttttggaccc ttattttatg
      241 ccataatgca acaagcttta gaactagctt tggatcgtgc agagtatgtc attgaaagtg
      301 cccgacagag acctcctaaa aggaaatacc tatcaagtgg aagaaaatct gtatttcaaa
      361 aactttatga cttgtatatt gaagaatgtg aaaaagaacc tgaggttaag aaattaagaa
      421 gaaatgtgaa cttgttagag aagcttgtta tgcaagagac tttgtcatgt ttagtggtca
      481 atctgtaccc aggaaatgag ggatattctc tgatgctcag gggaaaaaac ggatcagatt
      541 ctgagaccat tcgactgccc tatgaagaag gagagttgct tgaatatttg gatgcagaag
      601 aattacctcc tattttggtc gatctcctag aaaaatctca ggttaatatt tttcattgcg
      661 gatgtgtcat agcagaaata cgtgactaca ggcagtccag taacatgaaa tctcctggtt
      721 accaaagtcg gcacattctc ttacgtccaa caatgcagac tttaatttgt gatgtacatt
      781 caataacaag tgataaccat aaatggaccc aggaagacaa acttctgctt gagagccagc
      841 tcatcctagc tacagctgaa ccactctgtc ttgatccttc tatagcagtc acctgcactg
      901 caaacagact gctctataac aagcaaaaga tgaacactcg cccaatgaaa cggtgtttca
      961 agcggtattc cagatcctct ctgaatcggc agcaagatct gtctcattgt ccacctcctc
     1021 ctcagctgag gttacttgat ttcttacaaa aaagaaagga aagaaaagca ggtcagcatt
     1081 atgacctcaa aatttctaaa gcaggaaatt gtgtagatat gtggaaacgg agtccctgta
     1141 atttggccat accttctgaa gtagatgtgg agaaatatgc taaagtggaa aagtctatca
     1201 aatctgatga ctcacagcca acagtctggc cagcccatga cgtaaaagat gattatgtat
     1261 ttgaatgtga aactggtact cagtatcaga aaacaaagct gaccatcttg cagtcgcttg
     1321 gagatccact ttactatggt aaaatacagc catgtaaagc agatgaagaa agtgacagcc
     1381 agatgtctcc atcacactcc tccacagatg atcattcaaa ttggttcgtt attggatcaa
     1441 agaccgatgc cgagagggta gtcaatcagt accaagaatt agtccagaat gaagccaaat
     1501 gtccggtcaa gatgtcacac agctccagtg gctcagccag tctgagtcag gtttctccag
     1561 ggaaagaaac agaacaaact gaaactgtgt cagttcagtc ttcagtactg gggaagggcg
     1621 taaaacatcg acccccacca atcaaactgc cctcaagctc aggaaatagt tcctcaggta
     1681 actattttac gccacaacag acaagcagct ttctcaaatc tccaactcct cctccttctt
     1741 ctaagccatc aagtattcct cggaaatcat ctgtggatct caatcaagtt agcatgcttt
     1801 ctccagctgc cctatcacct gccagctcat cacaaagatc tggaactcct aagccatcta
     1861 ctcctacacc aaccccttca tcgaccccac accctcctga tgctcagagc tcaactccta
     1921 gtaccccttc agctacccct actccccaag attcaggctt cacccctcag cccactttgt
     1981 taactcagtt tgctcagcag caaaggtctc tgagccaggc aatgcctgta acaaccattc
     2041 ctctttccac catggtaaca tctataactc caggaaccac ggccacccag gtcatggcaa
     2101 actctgctgg acttaacttc atcaatgtag tgggctctgt ttgtggggcc caggctttga
     2161 tgagtggttc aaaccccatg ctgggctgta acacaggtgc cataactcct gcaggaataa
     2221 acctgagcgg ccttctaccc tcaggaggtc tgctaccaaa tgcattgccc agtgcaatgc
     2281 aggcagcttc tcaagcaggt gttccatttg gtttaaaaaa tacttcaagt ctcaggccct
     2341 taaatctact ccagcttcca ggtggttcac ttatttttaa cactctgcag cagcagcaac
     2401 agcagctctc ccagtttaca ccacaacaac ctcagcagcc cacaactgct agtcctcaac
     2461 agccagggga gcagggttct gaacaaggtt caaccagtca agaacaggcc ttatctgctc
     2521 agcaagctgc tgttattaac cttactggag taggaagttt tatgcagtca caggcagctg
     2581 cagttgcgat tcttgcagca tcaaatggct atggcagcag cagcagcaca aacagctcag
     2641 ctacatcgtc atcggcatac aggcagccag tcaaaaagta aaatgaagag aggcacgcca
     2701 accagtccaa aattctgagt cttgcattat tgtttgttcc ttttttaaaa acacaagagc
     2761 attgaatcaa aaggattgag tttctacttt ttgttttttt aatgtgtcag tattttacat
     2821 tgctagatgt acaaacttta tacagaagca caaccttatc atttttaaat aaaaacaggg
     2881 aaatggttta acaaactagg gttggtttgc ctaagtcatt gctttttaaa aatggtttca
     2941 ctatacatta tatggaagtg acctaagaaa taatagaaac atctttcaga agaatgtagt
     3001 ttgatattta tttagtataa aatgtttgtg cacagtgtta acaaatacaa tttttacaaa
     3061 tctgttttga aaa
//
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