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PREDICTED: Macaca mulatta DDB1 and CUL4 associated factor 12 (DCAF12), transcript variant X1, mRNA

NCBI Reference Sequence: XM_015117537.2

FASTA Graphics 

LOCUS       XM_015117537            3564 bp    mRNA    linear   PRI 26-APR-2019
DEFINITION  PREDICTED: Macaca mulatta DDB1 and CUL4 associated factor 12
            (DCAF12), transcript variant X1, mRNA.
ACCESSION   XM_015117537
VERSION     XM_015117537.2
DBLINK      BioProject: PRJNA528504
KEYWORDS    RefSeq.
SOURCE      Macaca mulatta (Rhesus monkey)
  ORGANISM  Macaca mulatta
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Cercopithecidae; Cercopithecinae; Macaca.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_041768.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 23, 2019 this sequence version replaced XM_015117537.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Macaca mulatta Annotation Release
                                           103
            Annotation Version          :: 103
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3564
                     /organism="Macaca mulatta"
                     /mol_type="mRNA"
                     /isolate="AG07107"
                     /bio_material="Coriell:AG07107"
                     /db_xref="taxon:9544"
                     /chromosome="15"
                     /sex="female"
                     /tissue_type="fibroblast"
     gene            1..3564
                     /gene="DCAF12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 mRNAs, 316 ESTs, 7 long SRA
                     reads, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 50 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:702148"
     CDS             156..1580
                     /gene="DCAF12"
                     /codon_start=1
                     /product="DDB1- and CUL4-associated factor 12 isoform X1"
                     /protein_id="XP_014973023.2"
                     /db_xref="GeneID:702148"
                     /translation="MMTEERSLMMHPWKTWRSGLSPWTVSYLLQWECRLRGRRGLGRD
                     AAQFGWDHTLHKRKRLPPVKRSLVYYLKNREVRLQNETSYSRVLHGYAAQQLPSLLKE
                     REFHLGTLNKVFASQWLNHRQVVCGTKCNTLFVVDVQTSQITKIPILKDREPGGVTQQ
                     GCGIHAIELNPSRTLLATGGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWISDTM
                     AVSGSRDGSMGLWEVTDDVLTKSDARHSVSRVPVYAHITHKALKDIPKEDTNPDNCKV
                     RALAFNSKNKELGAVSLDGYFHLWKAENTLSKLLSTKLPYCRENVCLAYGSEWSVYAV
                     GSQAHVSFLDPRQPSYNVKSVCSRERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQR
                     FLEERLSACYGSKPRLAGENLKLTTGKGWLNHDETWRNYFSDIDFFPNAVYTHCYDSS
                     GTKLFVAGGPLPSGLHGNYAGLWS"
ORIGIN      
        1 ccaaaagaaa caacagttcc caggtatcat ctctataccg ccccctttgg aaaggaaggt
       61 cttcttggac atagttatgg cctctgattt cccgggggcc tactaccccg ttggtggttg
      121 atttttcgaa ttcttcaact gcctggagcg cgggcatgat gacagaggaa cggtcattga
      181 tgatgcatcc ctggaagacc tggcgctcag gtctgtctcc ttggactgta tcttacctgc
      241 tccagtggga gtgcagactg agagggagaa gggggctggg cagagatgca gcccagtttg
      301 gctgggatca cacgcttcac aaaaggaaaa gacttcctcc tgtgaagaga tccttagtat
      361 actacttgaa gaaccgggaa gtcaggctac agaatgaaac cagctactct cgagtgttgc
      421 atggttatgc agcacagcaa cttcccagtc tcctgaagga gagagagttt caccttggga
      481 cccttaataa agtgtttgca tctcagtggt tgaatcatag gcaagtggtg tgtggcacaa
      541 aatgcaacac gctatttgta gtagatgtcc agacaagcca gatcaccaag atcccaattc
      601 tgaaagaccg ggaacctgga ggtgtgaccc agcagggctg tggtatccat gccatcgagc
      661 tgaatccttc tagaaccctg ctagccactg gaggagacaa ccccaacagt cttgccatct
      721 atcgactacc tacactggat cctgtgtgtg taggagatga tggacacaag gactggatct
      781 tttccatcgc atggatcagc gacactatgg cagtgtcggg ctcacgtgat ggttctatgg
      841 gactctggga ggtgacagat gatgttttga ccaaaagtga tgcaagacac agtgtgtcgc
      901 gggtccctgt gtatgcacac atcactcaca aggccttaaa ggacatcccc aaagaggaca
      961 caaaccctga caactgcaaa gttcgggctc tggccttcaa cagcaagaac aaggaattgg
     1021 gagcagtgtc tctggatggc tactttcatc tctggaaggc tgaaaataca ctatctaagc
     1081 tcctctccac caaactgcca tattgccgtg agaacgtgtg tctggcctat ggtagtgaat
     1141 ggtcagtgta tgcagtgggc tcccaagctc atgtctcctt cttggatcca cggcagccat
     1201 catacaatgt caagtctgtc tgttccaggg agcgaggcag tggaatccgg tccgtgagtt
     1261 tctatgagca catcatcact gtgggaactg ggcagggctc cctgctgttc tatgacatcc
     1321 gagctcagag atttctggaa gagaggctct cagcttgtta tgggtccaag cccagactag
     1381 caggggagaa tctgaaacta accactggca aaggctggct gaaccatgat gaaacctgga
     1441 ggaattactt ttcagacatt gacttcttcc ccaatgctgt ttacacccac tgctacgact
     1501 cgtctggaac gaaactcttt gtggcaggag gtcccctccc ttcagggctc catggaaact
     1561 atgctgggct ctggagttaa tgacaactcc ccaaatgcag agatttacac taacttccat
     1621 cctcagtttc cttgtttctt ctgatttttt ttttcctaat tgtgtgaggc tcttgtgttt
     1681 tagtgggaac accaaagttt gcctatagtt taggcactta ataggaagaa gctctgtaca
     1741 gaaatctgaa ggttgtttgg ttttttattt tcccctttgg taatcaaaat tttactgtct
     1801 tttattctgg cttttcaacc aaacattgtt gctaatccct atttttcttt aagtgacaca
     1861 cattctcccc tctctggctt ctttaggctg aaatgacata gtcattctca cccttacttc
     1921 actcttgagg ggtagggctc ctttataatt atatggttgc tgtcagactt tctgtgaaag
     1981 tttgggagct gtgtgtgtga gagagatctt gtctgtgtgt gtgtgtgagt gtgtgtgtgt
     2041 gtgtgatctt gtgtgcctgt aggtactgtg tgtcactgaa attacctgga gtgaggatta
     2101 cttgtaatta aaatatttat aaaagaaaca actttattca cagagtccag ctttgggact
     2161 agtctgtaac ttgtttttta cagtctaaca acactgataa taggaagtaa aaacagaaag
     2221 gaaaagaaat taccactggg aaaatcttct gagttagatt gcaggcttcc tggggcctcc
     2281 cgtgccagga ctgcaaagtg atccagccct acctgtcttc ccacctgtgt gtcccccgtg
     2341 tgggaagctg gtgtcacttc cccttcccac cctcacatct gcttagccag tagccacacc
     2401 cctaaaacat cagactcacc atccaggttc agctctagag gctgcaaaag gcttcatggg
     2461 acttggtaaa gagaatcccc atcctagctt ctctctccat cccctcaaga cctgatctgg
     2521 tgtttaaggg gcctggagct gggagtctca agtctgctaa ggttcacatc catagtcctc
     2581 ttggctttga ggagaatcct ctctgccatt cttccaatct cctcaatggg ttttgctttt
     2641 attttctaaa ttgggttaag tctaagaagg tgggggtgag cagggggttt atctgtgtgt
     2701 agtgagtgct tcatgtgtgg aatattcatt ttcccactgc agcgggactt ggggttgaag
     2761 ccacccctcc tattctgctg gcttagccct gagatggcaa caggctggcc tgcagtcagc
     2821 gtcattgtgc atgtaacagc atcgatgtga ttagtaattt gtctgttcct cccttgaact
     2881 gtctgtttag tctggggttt tttaacttgc aggcgactga ctgtgatgtc cacttgttcc
     2941 ttgattttta cacatcatgt caaagataac agctgttccc acccacgaat tcctctaagc
     3001 acatactctg cttttctgtc aacatcccat tgtggggaaa ggaaaagtca tatttattcc
     3061 tgcaccccag ttttttaact tgctctccca gttgtccccc tcttctctgg gtataagtag
     3121 ggaaattgga aaaaataata tatatatcct ccttttaatg gtgaggggct gctggagagg
     3181 agagacagca agtccaccct aacttgttac acagcacata ccacaggttc tggaattctc
     3241 atcttcgaac ctagagaaat aggtgctata aacagggaat taagcaaaat gctggatgct
     3301 atagatcttt taattgtctt aatttttttt ctattattaa actacaggct gtagatttct
     3361 tagttctcac agaacttcta tcattttaaa ctgacttgta tattaaaaaa aaaaaaaaaa
     3421 aatcttcagt aggatgtttt gtactattgc cagaccctct tctgtgatgg gtaatgcatt
     3481 tgattgtttg agattttctg tttttaaaaa tgtagcactt gactttttgc caaggaaaaa
     3541 aataaaaatt attccagtgc aaaa
//
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Reference sequence information

  • RefSeq protein product
    See the reference protein sequence for DDB1- and CUL4-associated factor 12 isoform X1 (XP_014973023.2).

More about the DCAF12 gene

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