Warning: The NCBI web site requires JavaScript to function. more...
An official website of the United States government
The .gov means it's official. Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you're on a federal government site.
The site is secure. The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.
Download features.
Download gene features.
NCBI Reference Sequence: XM_012959253.2
FASTA Graphics
LOCUS XM_012959253 3066 bp mRNA linear VRT 18-DEC-2019 DEFINITION PREDICTED: Xenopus tropicalis cyclin I (ccni), transcript variant X1, mRNA. ACCESSION XM_012959253 VERSION XM_012959253.2 DBLINK BioProject: PRJNA205740 KEYWORDS RefSeq. SOURCE Xenopus tropicalis (tropical clawed frog) ORGANISM Xenopus tropicalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_030677.2) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Dec 18, 2019 this sequence version replaced XM_012959253.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Xenopus tropicalis Annotation Release 104 Annotation Version :: 104 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3066 /organism="Xenopus tropicalis" /mol_type="mRNA" /strain="Nigerian" /db_xref="taxon:8364" /chromosome="1" /sex="female" /tissue_type="liver and blood" /dev_stage="adult" /note="F17 inbred" gene 1..3066 /gene="ccni" /gene_synonym="ccni-a; ccni-b; cyc1; cyi" /note="cyclin I; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 59 ESTs, 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns" /db_xref="GeneID:448195" /db_xref="Xenbase:XB-GENE-945654" CDS 255..1406 /gene="ccni" /gene_synonym="ccni-a; ccni-b; cyc1; cyi" /codon_start=1 /product="cyclin-I isoform X1" /protein_id="XP_012814707.1" /db_xref="GeneID:448195" /db_xref="Xenbase:XB-GENE-945654" /translation="MLRRLLLLPGRVARTEDKDWNIHLWRVWMGGPDLASLFLDVGIS PEQRDEVILWLAELKYQFRVYPETHALAISILDRFLAAVKARPKYLRCIAISCFFLAA KTIEEDERIPVLRVLTQGSSCGCSPAEVLRMERIILDKLNWDLHTATPLDFLHIFHAM TLNASPELFDRIPELNPSQHVALLTRQLLQCMAFHQLLQFKGSMLALALLSLEMEKLL PDWLAVTIKLLQLAQMDSAQLFYCREVAAHHLSLLQPPLPPNAVYIYSPLKRTLVSYN RGAYIHPSTVKEPGFHPQGNCISGALIKGASVLYQSLAAPAVCKQASTKRKVEQMEVD DFYDGIKRLYNEDSSADVVGMEIVACSSGLSRSEGSLSPCPQLQAVSVM" ORIGIN 1 gtgtggcttt gtactttgtg ctcaaaactt gttgagcatt ttttttgcct tctgtgaact 61 gaactgaagc acagcgccaa agtcccacag cgcaggagag gcgaaagaca ttgcagcaga 121 tgccgccaga ggcagaggag cagccccagg atgtcggtgg ggcagattaa ccggaccccg 181 ttcagtctcc agaataccaa gctggatctt ccccccccca tccttgtcac cgccacctgt 241 gtcacccccc aggcatgctg cggcgactgt tgctgctgcc ggggagagtg gccaggaccg 301 aggacaagga ctggaacatc catctgtgga gagtttggat gggtggcccg gatcttgcca 361 gcctgttctt ggatgtaggt atttctccag aacagcggga tgaagtgatc ctatggctgg 421 ctgaactgaa gtatcagttc cgtgtttacc cagaaacaca tgctctggcc atcagtattt 481 tggatcgttt tttggctgca gtaaaggctc gtccaaaata cttaaggtgc attgcaataa 541 gctgtttctt tcttgctgcc aaaaccattg aggaagacga gcggatcccg gtgctcagag 601 tcctgaccca aggcagctcg tgtggctgct ctccagctga ggttctcaga atggagagga 661 taattctaga taaacttaac tgggatcttc acacagctac gcctctggat tttcttcaca 721 ttttccatgc catgactttg aatgccagcc ctgagttgtt tgacagaata cctgaactga 781 acccatctca gcatgtagct ctcttgacga ggcaactttt gcaatgtatg gcatttcacc 841 agctgctaca gtttaagggc tccatgttgg cactggcact ccttagtcta gaaatggaaa 901 agctgcttcc tgattggctt gctgttacca taaaactgct ccaattggca cagatggata 961 gtgctcagct gttttattgc cgggaagtag cagcacatca cctttctctt ctgcagcctc 1021 ccttgccccc caatgctgta tacatctaca gtcccctcaa gcgtaccctg gtgtcctaca 1081 acagaggagc ttatatccac ccttccactg taaaggaacc aggattccat ccacagggca 1141 attgcatatc aggagctctg ataaagggag cgtctgtcct ctaccaaagt ctggcagctc 1201 cagctgtctg caaacaggcc tccaccaaga ggaaggtaga gcagatggaa gtggatgact 1261 tctatgatgg aatcaagagg ctatacaatg aagatagctc tgcagatgtt gtgggcatgg 1321 agatagtggc atgtagtagt ggcctatcca ggtcagaggg cagtctgtcc ccatgcccac 1381 aattacaagc tgtgtcagtc atgtaaagtc agcactttac ttggcagaag caagtaccag 1441 accagattcc tttgactctg tgctggtgga gtaacttcca atatggacct ctccagcaat 1501 agggttataa tgtcacacag gccatgcctt aacaggctac agtagagggc tacatctctg 1561 cctgttttct catgctgcta aactaagctt catcactaaa aaaaaaaaaa aaaaaaaaaa 1621 aaatactgaa attaaacaca tttgaagaaa aaaaaaatgc ccaaaaacag caaaaaaaaa 1681 aaaaagtaga gaaattgttt aacattatag tgttgtcaat gtcattgttt tatgcttgta 1741 caactactgt aagctgtgcc gcttagggcg aagacacaca gagctactag tagcagctac 1801 ttgtcgtggc tactaaaatg gataatgctg atcatttact gataacagtc tctacgtgtg 1861 ttttagcaga ggcaattctc agtattatct attgtctatg gcagggtatt ttctggcgtt 1921 tagtagctgt gacaagtagc tgcttctatg tagctctgtg tgtcttcacc cttaaaccta 1981 cccgtggagc tctatttaga tcatttccaa atatgtcctg cactgttatc atctctgctt 2041 tttttcttgc taattgatct ccccccccct ttcctttaaa ggagaaggaa aggaaaagtc 2101 acttgggggt gccaaaatgt taggcacccc caagtgactt gaattgcata ccttttaccc 2161 cggggctggt gcccctgtag agagacggaa agaacagccc ggggtatctg cagccattca 2221 ttcttcctgc tttgtgagca cgcacagtag agtgaaaagc cgaactttaa cagagaagtc 2281 ggcttttcac tctactgttc atgcgcttat tgtgttagtc ttagcgaaac ggaggcggaa 2341 ggaggaagcg catcgctcca ggtaccccgg gctggtgctg ttttctccta gcgattaaag 2401 tcacttgggg gtgcttaaca ttttagcgcc cccaagtgac ttagcctttc cttctccttt 2461 aagctggcca tacacgcacc gataatattg gaagaaacct cgataaaata tattgtcagt 2521 tacaatgcca tatctaaata catgattttg cacaattttg ggctttcctg ttaactttat 2581 tcaccgtctc tgtactaaga atattgctgg tgcttgtgaa atttgattat aattagtcat 2641 agaaaattct attatagaat cttgcagtaa tgtcatggta agctgtcagt caatgactat 2701 tacattcatg cgagttgaca tttaaacaca aagtttagcc gtgttctcac caaaaattac 2761 aaatatctac ctattttgaa ttttaagcca ttgacaccat tacaataagt tatctaatag 2821 caagctgaaa acaatagatt ctttttgttt atgggaaagt gttatcaact tttctcatta 2881 actacataaa taatatgtta caagtaacta tctgttttta aagcatgtgt gttccttatt 2941 gttttctttt ctgttgttat gatagccttc atttgaaatc ttagcacagt ctgtataagg 3001 catggccaat ggaatcattg tccctttatc aagttattct ggttgcaata aacaattacc 3061 caagta //
Whole sequence Selected region from: to:
All features Gene, RNA, and CDS features only
Show sequence Show reverse complement Show gap features
Your browsing activity is empty.
Activity recording is turned off.
Turn recording back on