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PREDICTED: Rattus norvegicus RAS-like, family 10, member B (Rasl10b), transcript variant X2, mRNA

NCBI Reference Sequence: XM_006247029.5

FASTA Graphics 

LOCUS       XM_006247029            3622 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus RAS-like, family 10, member B
            (Rasl10b), transcript variant X2, mRNA.
ACCESSION   XM_006247029
VERSION     XM_006247029.5
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086028) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Feb 22, 2024 this sequence version replaced XM_006247029.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3622
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..3622
                     /gene="Rasl10b"
                     /note="RAS-like, family 10, member B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     142 long SRA reads, 2 Proteins"
                     /db_xref="GeneID:303382"
                     /db_xref="RGD:1310873"
     CDS             724..1431
                     /gene="Rasl10b"
                     /codon_start=1
                     /product="ras-like protein family member 10B isoform X1"
                     /protein_id="XP_006247091.1"
                     /db_xref="GeneID:303382"
                     /db_xref="RGD:1310873"
                     /translation="MVSTYRVAVLGARGVGKSAIVRQFLYNEFSEVCVPTTARRLYLP
                     AVVMNGHVHDLQILDFPPISAFPVNTLQKGQQDRLRPEKECSQQLWRPQPDLLPKGLS
                     SQEWADACCRGLRSVHAYILVYDICCFDSFEYVKTIRQQILETRVIGTSETPIIIVGN
                     KRDLQRGRVIPRWNVSHLVRKTWKCGYVECSAKYNWHILLLFSELLKSVGCARCKHVH
                     AALRFQGALRRNRCAIM"
     polyA_site      3622
                     /gene="Rasl10b"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctcccagggg agagtcgcgg gggccagggg gcgtagcggg aggaatgaag gttgagatta
       61 gggattgggg agccggtccc gcggcgcccc agtgaatccg tcgggctcgg ggacccagcg
      121 gaaccccccg cgcccgcctc cccccccatc cgccggcgcg agtggggcgg cgcgctccgc
      181 agggcgagca gctgagcgac cctcggtgct gcggcccccc gcgccccagc ccgccgcgcc
      241 cgggccgcgg gcggcgcccc tcattctccc cccgggcggg ggagcccaag gcagcgccgg
      301 agcccggggg gagcgcggcc gcgccggcca gggcaggggg caggcagccg ggacggcccc
      361 ggacctagag ctacaaatca tcaaagctgg ggtttgtgtt cgagctctaa aagccacagg
      421 aactgagcaa gcaaaaccgg taacgagtcc atctccagag tcctgcccct tcctgggcag
      481 cagcagctgt gcggcaccag gccctatgag ctccgaggga agtcaaagac tcagagccgg
      541 cttttagctt gccactgttt agaaccacta agcttaaacg tgtctaggtg gtggccacag
      601 agggccagag gcaagcagag ggagcaatgg ttggtcctga cggtggctga gcccccagcc
      661 cctggaatat gcagcccgga ggagccccag gcaaggacgc ggtggcggag tggggcggga
      721 ggcatggtct ccacctaccg ggtggccgtg ctgggggcgc gaggtgtggg caagagtgcc
      781 atcgtgcgcc agttcttata caacgagttc agcgaggtct gtgtgcccac caccgcccgc
      841 cgcctctacc tgcctgctgt ggtcatgaat ggccatgtgc acgacctgca gatcctggac
      901 ttcccaccca tcagcgcctt ccctgtcaac acactgcaga agggacagca ggacagactg
      961 agacctgaga aggaatgttc tcagcagctc tggagacccc aaccagatct cttacccaag
     1021 ggcctatcct cccaggagtg ggcagatgcc tgctgcaggg gactccgaag cgtccacgcc
     1081 tacatcctgg tctatgacat ctgctgcttt gacagctttg agtacgtcaa gactatccgt
     1141 cagcagatcc tggagacgag ggtgatcggc acctcggaga cacccatcat catcgtgggc
     1201 aacaagcgcg acctgcaacg cggacgcgtg attccacgct ggaacgtgtc gcacttggtg
     1261 cgcaagacct ggaagtgcgg ctacgtggag tgctcggcca agtacaactg gcacatcctg
     1321 ctgctcttca gcgagctgct caagagtgtg ggctgcgccc gctgcaaaca cgtgcacgct
     1381 gccctgcgct ttcagggcgc gctgcgccgc aaccgctgcg ccatcatgtg acgccgcgtg
     1441 cgcccagcag cagcactgtc ccagcgaaag ggagggaggg gcggggccag cctcccgcgg
     1501 gacaccaggg ccagagcagg gaacccccgg agaagaactc tggactccgg gcctgaagca
     1561 cccctacagc cacgcacctc ccccacgaga atcagagggc gagagggagc ctccccgcta
     1621 ctcctcgtcc tcccctccca cctgggtctc cttgggtcag ccaccttcag tgctgtagtg
     1681 tagtgcccgg ccccaggagg ggccacaacc tgtaggccaa ggagcgtgtg aaatggaggg
     1741 tggggtgagg aggtgctgtc ttggccgggc ccctgcccat cttccccaca gtgtgtctgt
     1801 ctttacccta cttcccccct tccaatgtct gtcctctcaa gtgtctgtca gtcctctttt
     1861 gtcctaccta ccctctagtg tttctccctg ctccccagct ccgctcacag ggctctcatt
     1921 tcctccatcc ccttgtcgcg gatcctggca ggtttttgat gccaggcctt ctccccggca
     1981 gcgccaccgg cacagggcag agagatgcaa gtgtcctgag gaccaaagcc aaggggtcca
     2041 agggctgagg tccgacagct gtcagggaaa gaaggctgag ctctccctca tccagggaga
     2101 cctccctgcc cagcagcccc cagagacgca accacctacc ttccagcctt aactcaatgg
     2161 tccctgccgg gtgcccctcg cccctcttga ccctaaagcc agattgctcc cgggctaaaa
     2221 ttcttttttg ttttgtttga cagtgtggag aggatattcc tcaaaggatc agtttctctc
     2281 cataatgcct aggtcccact tgcctgttac ctcctgcact aggatgggct gctacattga
     2341 gggatatgga gtttgtggag gatggggggt ggggaagatg gtgcccggga gggggtcacg
     2401 ttatgctagc gatgattctg tgtcgcagtc ccacctcagt ccaactgccc aagactctgc
     2461 ctccatcagg tctcaggttg tcttgatcag tctgtattgg ggcagagccg aacgagggag
     2521 ttgtgcccgg gtgagatagg catgtatccc tacccatgcg tggaggccct caggatctga
     2581 ccccttatcc caacaccaga ttggccctat gccctaattc ctcacccacc ccattttccc
     2641 cggctgcctg gccgggtttc tacctctcgt caccggagct gatcactgtc agttttgtac
     2701 cgatttagaa ataatactaa tggagattcc aggagtggcc tgagggattg ctcggggact
     2761 tggagggagg gaggaagaag tggttccatg tcccctgccc tggccaaaga aagttcctga
     2821 ggctgaaccc tcagcctcag ccctggtcca gttgggagca tgataaggac cctttgtcaa
     2881 gaggggtcca caggacgcct gtacacaggg gtacatagcc tttgtcaagg ctgcagtgca
     2941 cagaccagga aatcaggtac ccagagaggt gatggggagg aatctggggg caggggtggg
     3001 atggggaatt tatggtgtcc ccgtgtggga gggaatttat gattctctct tctgcttccc
     3061 cactgaatcg cactccctct acctagtggg gcacggcagt acaacaacag cagccctcac
     3121 tctggggcag cccagcgttc tgggttctag tccttgctgt cctgcacaat tttgggctag
     3181 cgatttgccc tctctgagcc tccctctgaa acagaggcag tggctcccct tccccacact
     3241 tcagagtggc tgggagggta aggagaaggg gtgcccactt tcctctcctg cagccccacc
     3301 actggttcct cggggtgtgg ggtaaagatg gcagcctccc atgtgcccga tcacccccca
     3361 actctggggc actcgaggtg aggatggggg atccagacct ctggcttgcc tccactgggg
     3421 agtcattgga atgtagcccc ctcacccttt cctcttcacc ccaggtcttg gatttcaggt
     3481 ccctccaccc ccattctgag tctctgtcct tcccctcccc aaccagggtt tcccacacag
     3541 ggtctggagt gtgtgtgaca cccaccgagc tgttattgga agtcagatta aaaatcaggg
     3601 agtgttttcc ctcgtttctc ta
//
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