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PREDICTED: Glycine max uncharacterized LOC100805068 (LOC100805068), transcript variant X2, mRNA

NCBI Reference Sequence: XM_003555746.5

FASTA Graphics 

LOCUS       XM_003555746            1128 bp    mRNA    linear   PLN 19-APR-2021
DEFINITION  PREDICTED: Glycine max uncharacterized LOC100805068 (LOC100805068),
            transcript variant X2, mRNA.
ACCESSION   XM_003555746
VERSION     XM_003555746.5
DBLINK      BioProject: PRJNA48389
KEYWORDS    RefSeq.
SOURCE      Glycine max (soybean)
  ORGANISM  Glycine max
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50
            kb inversion clade; NPAAA clade; indigoferoid/millettioid clade;
            Phaseoleae; Glycine; Glycine subgen. Soja.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_038256.2) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 19, 2021 this sequence version replaced XM_003555746.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Glycine max Annotation Release 104
            Annotation Version          :: 104
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1128
                     /organism="Glycine max"
                     /mol_type="mRNA"
                     /cultivar="Williams 82"
                     /db_xref="taxon:3847"
                     /chromosome="20"
                     /tissue_type="callus"
     gene            1..1128
                     /gene="LOC100805068"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 20 ESTs, 110 long SRA reads, 5
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 99 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:100805068"
     CDS             104..1003
                     /gene="LOC100805068"
                     /codon_start=1
                     /product="uncharacterized protein LOC100805068 isoform X2"
                     /protein_id="XP_003555794.1"
                     /db_xref="GeneID:100805068"
                     /translation="MEEEEAPDVICELENVQGLVDALTAVRWKRQQDAVLELSEHGIV
                     LIVEESGCLQAKVYLKRELFIRYDYNARGGRPRFGVSLGHFVDCLNAFSVPAGQSISS
                     LVQIQYPGPDMQLLLKSVDSLDASICAEIRTRIPDTIAWDYNFEPAGANPLTFTVKSA
                     ALKEAIEDLEWPGSSIKITLEPDPPSVSLRAEGHGDLQIDFMYYVNSELLVAFQCDHQ
                     ASFKYKYKFLRATTSNMPSSVIKENRGSKLSIGRGGMLKVQHLVSIAKPSVSHPYADS
                     VGYQQPSRIAHIEFFVKPEESED"
ORIGIN      
        1 tcttggttcc atttactacc agtgagtgga gtttgtagac agtagtagaa agggaaagag
       61 ggttgataga agagaagggt ttaggatttt gcacaactca ctcatggagg aggaagaagc
      121 cccagacgtt atatgcgagc tggaaaacgt tcaaggctta gtggacgccc tcaccgccgt
      181 tcggtggaag cgccagcagg acgccgtgtt ggagttgtcc gaacacggca ttgttttgat
      241 cgtcgaagaa agcggttgcc tccaagccaa ggtttatctc aaacgagagt tattcattcg
      301 ttacgattac aacgcacgag gaggacgacc tcgttttgga gtgagtttgg ggcatttcgt
      361 agattgcttg aacgccttct cggttcctgc tggtcaatca atatcaagcc ttgttcagat
      421 tcaatatccg ggtcctgaca tgcagcttct tctcaaatct gtagattcgc tggatgccag
      481 tatttgtgca gagatcagga caaggattcc agatacaatt gcatgggact acaattttga
      541 acctgcaggg gcaaaccctt taacctttac tgttaaatct gcagctctga aggaagctat
      601 tgaggatctt gaatggcctg gatcaagcat caagattact ctagagccag atcctccttc
      661 tgtttcatta agagctgaag gacatggaga cttgcagata gacttcatgt attatgtgaa
      721 ttccgaactc ctggtggcat ttcagtgtga tcatcaagct tctttcaagt acaaatataa
      781 gttcctcaga gcaacaactt ctaatatgcc tagcagtgtt attaaagaaa atagaggaag
      841 taagttaagc attgggagag gtggaatgtt aaaagtccag catctggttt caattgccaa
      901 accatctgtg tcacacccat atgctgattc ggttggctat cagcaaccaa gtagaatagc
      961 tcatattgaa ttctttgtga aaccagagga aagtgaggac tgagtgaatg attattagtt
     1021 actataaaga ctccgtcaag ttttgctatg caaaccatta acttcgcaaa agaattacaa
     1081 aatggtttgt attcagaatg ttgatcaaag aggtattttg cagaaaaa
//
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Reference sequence information

  • RefSeq alternative splicing
    See the other reference mRNA sequence splice variant for the LOC100805068 gene (XM_041013187.1).
  • RefSeq protein product
    See the reference protein sequence for uncharacterized protein LOC100805068 isoform X2 (XP_003555794.1).

More about the gene LOC100805068

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