U.S. flag

An official website of the United States government

H.sapiens rTS alpha mRNA containing four open reading frames

GenBank: X67098.1

FASTA Graphics 

LOCUS       X67098                  1817 bp    mRNA    linear   PRI 21-OCT-2008
DEFINITION  H.sapiens rTS alpha mRNA containing four open reading frames.
ACCESSION   X67098
VERSION     X67098.1
KEYWORDS    antisense RNA.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1812)
  AUTHORS   Dolnick,B.J.
  TITLE     Cloning and characterization of a naturally occurring antisense RNA
            to human thymidylate synthase mRNA
  JOURNAL   Nucleic Acids Res. 21 (8), 1747-1752 (1993)
   PUBMED   8493092
REFERENCE   2
  AUTHORS   Dolnick,B.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JUN-1992) B.J. Dolnick, Roswell Park Cancer
            Institute, Grace Cancer Drug Center, Elm & Carlton Sts, Buffalo NY
            142 63, USA
  REMARK    revised by [3] MAT
REFERENCE   3  (bases 1 to 1817)
  AUTHORS   Dolnick,B.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-APR-1994) B.J. Dolnick, Roswell Park Cancer
            Institute, Grace Cancer Drug Center, Elm & Carlton Sts, Buffalo NY
            142 63, USA
COMMENT     On Apr 29, 1994 this sequence version replaced gi:312069.
            Sequence data conflicts at 1353, 1678, 1647, 1646, 1694 and 1643
            (all complement) with X02308 (Nucleic Acids Research, 13,
            2035-2043, 1985).
FEATURES             Location/Qualifiers
     source          1..1817
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /cell_line="KB cell line"
                     /cell_type="carcinoma"
     exon            1..128
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /number=1
     CDS             18..290
                     /note="unnamed protein product; ORF1"
                     /codon_start=1
                     /protein_id="CAA47471.1"
                     /db_xref="GOA:Q7L5Y1"
                     /db_xref="HGNC:HGNC:30365"
                     /db_xref="InterPro:IPR001354"
                     /db_xref="InterPro:IPR013341"
                     /db_xref="InterPro:IPR013342"
                     /db_xref="InterPro:IPR015654"
                     /db_xref="InterPro:IPR018110"
                     /db_xref="UniProtKB/Swiss-Prot:Q7L5Y1"
                     /translation="MHTDPDYSAAYVVIETDAEDGIKGCGITFTLGKGTEVDWSRKGR
                     GAPGDSGRPKRGVGLVGQAGGKACLEVTCGHGSQDAGILHRFQVHH"
     CDS             67..1152
                     /note="unnamed protein product; ORF1A"
                     /codon_start=1
                     /protein_id="CAA47472.1"
                     /db_xref="GOA:Q7L5Y1"
                     /db_xref="HGNC:HGNC:30365"
                     /db_xref="InterPro:IPR001354"
                     /db_xref="InterPro:IPR013341"
                     /db_xref="InterPro:IPR013342"
                     /db_xref="InterPro:IPR015654"
                     /db_xref="InterPro:IPR018110"
                     /db_xref="UniProtKB/Swiss-Prot:Q7L5Y1"
                     /translation="MQKMESRGVELPSLWEKALKLIGPEKGVVHLATAAVLNAVWDLW
                     AKQEGKPVWKLLVDMDPRMLVSCIDFRYITDVLTEEDALEILQKGQIGKKEREKQMLA
                     QGYPAYTTSCAWLGYSDDTLKQLCAQALKDGWTRFKVKVGADLQDDMRRCQIIRDMIG
                     PEKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIEEPTSPDDILGHATISKALVPLGIG
                     IATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLMAKKFEIPVCPHAGG
                     VGLCELVQHLIIFDYISVSASLENRVCEYVDHLHEHFKYPVMIQRASYMPPKDPGYST
                     EMKEESVKKHQYPDGEVWKKLLPAQEN"
     exon            129..242
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /number=2
     exon            243..314
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /number=3
     exon            315..355
                     /number=4
     exon            356..968
                     /number=5
     exon            969..1050
                     /number=6
     exon            1051..1296
                     /number=7
     exon            1297..1817
                     /number=8
     regulatory      1796..1801
                     /regulatory_class="polyA_signal_sequence"
                     /experiment="experimental evidence, no additional details
                     recorded"
ORIGIN      
        1 gccacggcgc ggacgccatg cacacggacc ctgactactc ggctgcctat gtcgtcatag
       61 aaactgatgc agaagatgga atcaaggggt gtggaattac cttcactctg ggaaaaggca
      121 ctgaagttga ttggtccaga aaagggcgtg gtgcacctgg cgacagcggc cgtcctaaac
      181 gcggtgtggg acttgtgggc caagcaggag ggaaagcctg tctggaagtt acttgtggac
      241 atggatccca ggatgctggt atcctgcata gatttcaggt acatcactga tgtcctgact
      301 gaggaggatg ccctagaaat actgcagaaa ggtcaaattg gtaaaaaaga aagagagaag
      361 caaatgctgg cacaaggata ccctgcttac acgacatcgt gcgcctggct ggggtactca
      421 gatgacacgt tgaagcagct ctgtgcccag gcgctgaagg atggctggac caggtttaaa
      481 gtaaaggtgg gtgctgatct ccaggatgac atgcgaagat gccaaatcat ccgagacatg
      541 attggaccgg aaaagacttt gatgatggat gccaaccagc gctgggatgt gcctgaggcg
      601 gtggagtgga tgtccaagct ggccaagttc aagccattgt ggattgagga gccaacctcc
      661 cctgatgaca ttctggggca cgccaccatt tccaaggcac tggtcccatt aggaattggc
      721 attgccacag gagaacagtg ccacaataga gtgatattta agcaactcct acaggcgaag
      781 gccctgcagt tcctccagat tgacagttgc agactgggca gtgtcaatga gaacctctca
      841 gtattgctga tggccaaaaa gtttgaaatt cctgtttgcc cccatgctgg tggagttggc
      901 ctctgtgaac tggtgcagca cctgattata tttgactaca tatcagtttc tgcaagcctt
      961 gaaaataggg tgtgtgagta tgttgaccac ctgcatgagc atttcaagta tcccgtgatg
     1021 atccagcggg cttcctacat gcctcccaag gatcccggct actcaacaga aatgaaggag
     1081 gaatctgtaa agaaacacca gtatccagat ggtgaagttt ggaagaaact ccttcctgct
     1141 caagaaaatt aagtgctcag ccccaacaac ttttttcttt ctgaagtgaa agggcttaaa
     1201 atttcttgga aatagtttta caaaaatgga tttaaaaaat cctaccgatc aagatgagtt
     1261 cagctagaag tcataccacc ctcaggaatc agctaaagca aaaagaactt ttacctcggc
     1321 atccagccca acccctaaag actgacaata tccttcaagc tcctttgaaa gcaccctaaa
     1381 cagccatttc cattttaata gttggatgcg gattgtaccc ttcaatctga aagtcttcag
     1441 ctttgaagtc atcaattttc tcaacttttc gaagaatcct gagctttggg aaaggtctgg
     1501 gttctcgctg aagctaaaaa caaaataagg ccattatttt gccataattg tacgacctgt
     1561 tgtaattgct cctcatgtcc atgaaacaag tacacaggat gtgatcaaca aagttctatt
     1621 ttacaggagt atgatcctgt cgataccttg ccgtagttat gtaacatgat tggagcgcaa
     1681 ccagctgttc tcttgaccac agatcgagag tgaggggtat tttgtgacat tacacagcat
     1741 caggagcctg gtgcctcatc aggtgtaagt tcttataacc actcttggca aatttattaa
     1801 agacaggaac acagtca
//
Feature
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

Reference sequence information

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.