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Escherichia coli strain LVSTRB106, whole genome shotgun sequencing project

GenBank: SQHZ00000000.1

  • This entry is the master record for a whole genome shotgun sequencing project and contains no sequence data.

LOCUS       SQHZ01000000             213 rc    DNA     linear   BCT 11-JUN-2019
DEFINITION  Escherichia coli strain LVSTRB106, whole genome shotgun sequencing
            project.
ACCESSION   SQHZ00000000
VERSION     SQHZ00000000.1
DBLINK      BioProject: PRJNA528606
            BioSample: SAMN11232852
KEYWORDS    WGS.
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (bases 1 to 213)
  AUTHORS   Naaber,P.
  TITLE     Phenotypic and molecular epidemiology of Extended Spectrum Beta
            Lactamase producing Escherichia coli in Northern and Eastern Europe
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 213)
  AUTHORS   Naaber,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAR-2019) Bioinformatics, University of Tartu, Riia,
            Tartu 51010, Estonia
COMMENT     The Escherichia coli whole genome shotgun (WGS) project has the
            project accession SQHZ00000000.  This version of the project (01)
            has the accession number SQHZ01000000, and consists of sequences
            SQHZ01000001-SQHZ01000213.
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Velvet v. 1.2.10
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 73.17867859375x
            Sequencing Technology  :: HiSeq2500 Rapid Run
            ##Genome-Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..213
                     /organism="Escherichia coli"
                     /mol_type="genomic DNA"
                     /strain="LVSTRB106"
                     /isolation_source="clinical sample"
                     /host="Homo sapiens"
                     /db_xref="taxon:562"
                     /geo_loc_name="Latvia"
                     /collection_date="2012"
                     /collected_by="Baltic ESBL Project"
WGS         SQHZ01000001-SQHZ01000213
//
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