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Apodemus agrarius strain Aa19-96_CU cytochrome b gene, partial cds; mitochondrial

GenBank: OR113746.1

FASTA Graphics 

LOCUS       OR113746                1165 bp    DNA     linear   ROD 29-MAY-2024
DEFINITION  Apodemus agrarius strain Aa19-96_CU cytochrome b gene, partial cds;
            mitochondrial.
ACCESSION   OR113746
VERSION     OR113746.1
KEYWORDS    .
SOURCE      mitochondrion Apodemus agrarius (Eurasian field mouse)
  ORGANISM  Apodemus agrarius
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Apodemus.
REFERENCE   1  (bases 1 to 1165)
  AUTHORS   Prayitno,S.P., Natasha,A., Lee,S., Kim,C.M., Lee,Y.M., Park,K.,
            Kim,J., Kim,S.G., Park,J., Rajoriya,S., Palacios,G., Oh,Y.,
            Song,J.W., Kim,D.M. and Kim,W.K.
  TITLE     Etiological agent and clinical characteristics of haemorrhagic
            fever with renal syndrome in the southern Republic of Korea: a
            genomic surveillance study
  JOURNAL   Clin Microbiol Infect 30 (6), 795-802 (2024)
   PUBMED   38402954
REFERENCE   2  (bases 1 to 1165)
  AUTHORS   Prayitno,S.P. and Kim,W.-K.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-JUN-2023) Microbiology, Hallym University, 1
            Hallymdaehak-gil, Chuncheon-si, Gangwon-do 24252, South Korea
COMMENT     ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1165
                     /organism="Apodemus agrarius"
                     /organelle="mitochondrion"
                     /mol_type="genomic DNA"
                     /strain="Aa19-96_CU"
                     /isolation_source="kidney tissue"
                     /db_xref="taxon:39030"
                     /geo_loc_name="South Korea: Boseong-gun"
                     /collection_date="Oct-2019"
     CDS             5..>1165
                     /codon_start=1
                     /transl_table=2
                     /product="cytochrome b"
                     /protein_id="XBC17298.1"
                     /translation="MTNIRKTHPLFKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQ
                     ILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGM
                     YYGSYAFMETWNIGVVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL
                     VEWIWGGFSVDKATLTRFFAFHFILPFIIAALVIVHLLFLHETGSNNPTGLNSDADKI
                     PFHPYYTIKDILGIFIMIMFLMTLVLFFPDLLGDPDNYTPANPLNTPPHIKPEWYFLF
                     AYAILRSIPNKLGGVLALVLSILILAFLPFLHTSKQRSLMFRPITQMLYWILVANLLV
                     LTWIGGQPVEYPFVIIGQLASISYFSIILIFMPISGIIENNMLKWNLCPDSKE"
ORIGIN      
        1 cctaatgaca aacatccgaa aaactcaccc cttatttaaa atcattaacc actctttcat
       61 cgacctccct gccccatcta acatctcatc ctgatgaaac tttggctccc tcctaggcct
      121 atgcctcgta attcaaattc ttacaggctt attcctagcc atacactaca catcagacac
      181 aataacagca ttctcatcag ttacacatat ttgccgagac gtaaactatg gatgactaat
      241 tcgatatata cacgctaatg gagcttcaat attttttatc tgcttatttc tccatgtagg
      301 acgaggaatg tactacggat cctatgcatt tatagaaaca tgaaatatcg gagtagtcct
      361 attatttgca gtaatagcta cagcattcat aggctatgta cttccatgag gacaaatatc
      421 cttctgaggg gcaacagtaa ttacaaatct cctctcagcc atcccatata tcggcactac
      481 cctggtagaa tgaatttgag gaggattctc agtagataaa gccactttaa cacgtttctt
      541 cgcattccat tttattctcc cattcattat cgcagccctg gtaatcgtcc atctcctatt
      601 tctccacgaa acaggctcaa acaacccaac aggtttaaac tcagacgccg ataaaatccc
      661 atttcaccca tactacacaa ttaaagatat tctaggcatt ttcattataa ttatattcct
      721 aataaccctg gtcctattct tcccggacct acttggagac ccagataatt acacaccagc
      781 aaatccactt aatacaccac cacatatcaa accagaatgg tactttctat ttgcatatgc
      841 aatcctacgc tctattccaa acaaactagg aggagtccta gctctagtcc tatccatcct
      901 tatcctagcc tttctaccat ttcttcacac ttcaaaacaa cgaagcctaa tattccgtcc
      961 tattactcaa atactctact gaatcctagt agctaacctt ctcgtcctta cctgaatcgg
     1021 cggacaacca gttgaatacc cattcgtaat catcggccaa ctcgcctcca tcagctactt
     1081 ctcaattatc ctaatcttta tgccaatctc aggcatcatt gaaaataata tactaaaatg
     1141 aaacctatgc cctgatagta aagaa
//
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