LOCUS OQ692195 1140 bp DNA linear ROD 18-APR-2024
DEFINITION Cratogeomys castanops pratensis isolate TK48952 cytochrome b (cytb)
gene, complete cds; mitochondrial.
ACCESSION OQ692195
VERSION OQ692195.1
KEYWORDS .
SOURCE mitochondrion Cratogeomys castanops pratensis
ORGANISM Cratogeomys castanops pratensis
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia;
Castorimorpha; Geomyidae; Cratogeomys.
REFERENCE 1 (bases 1 to 1140)
AUTHORS Bradley,R.D., Pham,A.T., Roberts,E.K., Soniat,T.J., Poehlein,C.M.,
Mills,M.N., Ballard,M.K., Pitts,R.M., Lindsey,L.L., Halsey,M.K.,
Ray,D.A., Stevens,R.D., Schmidly,D.J. and Wright,E.A.
TITLE Genetic identification of pocket gophers (genera Cratogeomys,
Geomys, and Thomomys) in Texas and surrounding area
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1140)
AUTHORS Bradley,R.D., Pham,A.T., Roberts,E.K., Soniat,T.J., Poehlein,C.M.,
Mills,M.N., Ballard,M.K., Pitts,R.M., Lindsey,L.L., Halsey,M.K.,
Ray,D.A., Stevens,R.D., Schmidly,D.J. and Wright,E.A.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2023) Biological Sciences, Texas Tech University,
2901 Main St, Lubbock, TX 79409, USA
COMMENT ##Assembly-Data-START##
Sequencing Technology :: Sanger dideoxy sequencing
##Assembly-Data-END##
FEATURES Location/Qualifiers
source 1..1140
/organism="Cratogeomys castanops pratensis"
/organelle="mitochondrion"
/mol_type="genomic DNA"
/isolate="TK48952"
/sub_species="pratensis"
/db_xref="taxon:3135405"
gene 1..1140
/gene="cytb"
CDS 1..1140
/gene="cytb"
/codon_start=1
/transl_table=2
/product="cytochrome b"
/protein_id="WXX19239.1"
/translation="MAIMRKSHPLMKIVNHAFIDLPTPPNISGWWNFGSLLGLCLILQ
ISTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASLFFICLYIHIGRGI
YYGSYLYKETWNIGILLLFLTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQDL
VEWIWGGFSVDKATLTRFFAFHFILPFIITALVMVHLLFLHETGSNNPLGLPSDCGKV
PFHPYYTTKDFMGAILLLTLFMTLVLFFPDKLGDPDNYTPANPLNTPPHIKPEWYFLF
AYAILRSIPNKLGGVMALVFSILVLALLPYLHTSKQRSLSFRPLSQTLFWILVSDVIT
LTWIGGQPVEPPYIIIGQVASVLYFLIILILMPIAGLIENKMLKW"
ORIGIN
1 atggcaatta tacgaaaatc acatccatta ataaaaattg tcaaccacgc tttcattgac
61 ctgccaacgc ccccaaacat ctctggttga tgaaactttg gctccctatt aggattatgc
121 ttaatcctac aaatctccac aggcctattt ttggctatac actatacatc agacaccata
181 acagccttct catcagtaac acatatctgc cgagacgtca actacggctg attaattcga
241 tacatacacg ctaacggcgc ctccctattc ttcatttgcc tttacattca tatcggacga
301 ggaatctatt acggatctta cttatataaa gaaacatgaa acattggcat cctactacta
361 tttctaacca tagccaccgc atttgtagga tatgtattac catgaggaca aatatcattt
421 tgaggggcca cagtcattac taatttacta tcagctattc catacattgg acaagaccta
481 gtagaatgaa tttgaggtgg attttctgta gacaaagcaa cattaacccg attcttcgca
541 ttccatttta ttctcccatt cattattact gccctagtta tagtccacct attattcctt
601 catgaaacag gatcgaacaa ccctttagga cttccatcag actgcggtaa agtaccattc
661 cacccctact acacaaccaa agattttata ggagctattt tactactcac actattcata
721 accttagtgt tatttttccc agataaacta ggggatcccg acaactatac tcccgccaac
781 ccacttaata ccccaccaca catcaaacca gaatgatact tcttatttgc atatgcaatc
841 ctacgatcaa tccctaataa actaggagga gttatagccc tagtattttc aatcctagta
901 ttagcccttc tcccttatct ccacacatca aaacaacgaa gcctctcatt ccgacccctg
961 agtcaaaccc tattttgaat tttagtttct gacgtaatta ccctaacatg aatcggaggt
1021 caaccagttg aaccacccta tattatcatt ggtcaggtag cttccgtcct atactttcta
1081 atcatcctaa ttctaatacc aattgcaggt ctcatcgaaa acaagatgct taaatgaaga
//