Warning: The NCBI web site requires JavaScript to function. more...
An official website of the United States government
The .gov means it's official. Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you're on a federal government site.
The site is secure. The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.
Download features.
Download gene features.
NCBI Reference Sequence: NZ_QLJP01000016.1
FASTA Graphics
LOCUS NZ_QLJP01000016 89351 bp DNA linear CON 17-JUN-2024 DEFINITION Escherichia coli strain B11C1 NODE_16_length_89351_cov_51.524794, whole genome shotgun sequence. ACCESSION NZ_QLJP01000016 NZ_QLJP01000000 VERSION NZ_QLJP01000016.1 DBLINK BioProject: PRJNA224116 BioSample: SAMN09399342 Assembly: GCF_003389005.1 KEYWORDS WGS; RefSeq. SOURCE Escherichia coli ORGANISM Escherichia coli Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia. REFERENCE 1 (bases 1 to 89351) AUTHORS Billard-Pomares,T. and Branger,C. TITLE The arginine deiminase operon is responsible for a fitness trade-off in extended-spectrum beta-lactamase encoding strains of Escherichia coli JOURNAL Unpublished REFERENCE 2 (bases 1 to 89351) AUTHORS Billard-Pomares,T. and Branger,C. TITLE Direct Submission JOURNAL Submitted (12-JUN-2018) UMR 1137 IAME, INSERM, 16 rue Henri Huchard, Paris 75018, France COMMENT REFSEQ INFORMATION: The reference sequence is identical to QLJP01000016.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: APR-2018 Assembly Method :: SPAdes v. 3.10.1 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 50x Sequencing Technology :: Illumina HiSeq ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_003389005.1-RS_2024_06_17 Annotation Date :: 06/17/2024 06:32:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,782 CDSs (total) :: 4,713 Genes (coding) :: 4,495 CDSs (with protein) :: 4,495 Genes (RNA) :: 69 rRNAs :: 1, 1, 4 (5S, 16S, 23S) complete rRNAs :: 1 (5S) partial rRNAs :: 1, 4 (16S, 23S) tRNAs :: 53 ncRNAs :: 10 Pseudo Genes (total) :: 218 CDSs (without protein) :: 218 Pseudo Genes (ambiguous residues) :: 0 of 218 Pseudo Genes (frameshifted) :: 70 of 218 Pseudo Genes (incomplete) :: 149 of 218 Pseudo Genes (internal stop) :: 44 of 218 Pseudo Genes (multiple problems) :: 41 of 218 CRISPR Arrays :: 2 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..89351 /organism="Escherichia coli" /mol_type="genomic DNA" /submitter_seqid="NODE_16_length_89351_cov_51.524794" /strain="B11C1" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:562" /geo_loc_name="France: Dijon" /lat_lon="47.19 N 4.2 E" /collection_date="2005" /collected_by="IAME UMR 1137" gene complement(106..1365) /gene="rhaA" /locus_tag="D0D43_RS12610" CDS complement(106..1365) /gene="rhaA" /locus_tag="D0D43_RS12610" /EC_number="5.3.1.14" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_026276.1" /GO_function="GO:0008740 - L-rhamnose isomerase activity [Evidence IEA]" /GO_process="GO:0019301 - rhamnose catabolic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="L-rhamnose isomerase" /protein_id="WP_001311268.1" /translation="MTTQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDD VSGFENPEGSLTGGIQATGNYPGKARNASELRADLEQAMRLIPGPKRLNLHAIYLESD TPVSRDQIKPEHFKNWVEWAKANQLGLDFNPSCFSHPLSADGFTLSHADDSIRQFWID HCKASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLAALDEVISEKLNP AHHIDAVESKLFGIGAESYTVGSNEFYMGYATSRQTALCLDAGHFHPTEVISDKISAA MLYVPQLLLHVSRPVRWDSDHVVLLDDETQAIASEIVRHDLFDRVHIGLDFFDASINR IAAWVIGTRNMKKALLRALLEPTAELRKLEAAGDYTARLALLEEQKSLPWQAVWEMYC QRHDTPAGSEWLESVRAYEKEILSRRG" gene complement(1362..2831) /gene="rhaB" /locus_tag="D0D43_RS12615" CDS complement(1362..2831) /gene="rhaB" /locus_tag="D0D43_RS12615" /EC_number="2.7.1.5" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418340.1" /GO_function="GO:0008993 - rhamnulokinase activity [Evidence IEA]" /GO_process="GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0019301 - rhamnose catabolic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="rhamnulokinase" /protein_id="WP_000144073.1" /translation="MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHS QNGYVTWDVDSLESAIRLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAY RDSRTNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLM PDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIG HWICPQGNEIPVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTA LAANITNEGGAEGRYRVLKNIMGLWLLQRVLQEQQINDLPALISATQALPACRFIINP NDDRFINPETMCSEIQAACRETAQPIPESDAELARCIFDSLALLYADVLHELAQLRGE DFSQLHIVGGGCQNTLLNQLCADACGIRVIAGPVEASTLGNIGIQLMTLDELNNVDDF RQVVSTTANLTTFTPNPDSEIAHYVAQIHSTRQTKELCA" gene 3119..3955 /gene="rhaS" /locus_tag="D0D43_RS12620" CDS 3119..3955 /gene="rhaS" /locus_tag="D0D43_RS12620" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418341.1" /GO_function="GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]" /GO_process="GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="HTH-type transcriptional activator RhaS" /protein_id="WP_000217137.1" /translation="MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHG TGIHVFNGQPYTITGGTVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLL PQELDGQYPSHWRVNHSVLQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKS SLQENLENSASRLNLLLAWLEDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQR YLNRLRLMKARHLLRHSEASVTDIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGF LQ" gene 4029..4877 /gene="rhaR" /locus_tag="D0D43_RS12625" CDS 4029..4877 /gene="rhaR" /locus_tag="D0D43_RS12625" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418342.2" /GO_function="GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]" /GO_process="GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="HTH-type transcriptional activator RhaR" /protein_id="WP_001336056.1" /translation="MAHQLKLLKDDFFASDQQAVAVADRYPQDVFAEHTHDFCELVIV WRGNGLHVLNDRPYRITRGDLFYIHADDKHSYASVNDLVLQNIIYCPERLKLNLDWQG AIPGFNASAGQPHWRLGSMGMAQARQVIGQLEHESSQHVPFANEMAELLFGQLVMLLN RHRYTSDSLPPTSSETLLDKLITRLAASLKSPFALDKFCDEASCSERVLRQQFRQQTG MTINQYLRQVRVCHAQYLLQHSRLLISDISTECGFEDSNYFSVVFTRETGMTPSQWRH LNSQKD" gene complement(4874..5908) /gene="rhaT" /locus_tag="D0D43_RS12630" CDS complement(4874..5908) /gene="rhaT" /locus_tag="D0D43_RS12630" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418343.1" /GO_function="GO:0015153 - rhamnose transmembrane transporter activity [Evidence IEA]" /GO_process="GO:0008645 - hexose transmembrane transport [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="L-rhamnose/proton symporter RhaT" /protein_id="WP_000063517.1" /translation="MSNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIV SWIILPWAISALLLPNFWAYYSSFSLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMG IGIAIGITLIVGTLMTPIINGNFDVLISTEGGRMTLLGVLVALIGVGIVTRAGQLKER KMGIKAEEFNLKKGLVLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYV VIMGGGAIINLGFCFIRLAKVKDLSLKADFSLAKSLIIHNVLLSTLGGLMWYLQFFFY AWGHARIPAQYDYISWMLHMSFYVLCGGIVGLVLKEWNNAGRRPVTVLSLGCVVIIVA ANIVGIGMAN" gene 6193..6813 /gene="sodA" /locus_tag="D0D43_RS12635" CDS 6193..6813 /gene="sodA" /locus_tag="D0D43_RS12635" /EC_number="1.15.1.1" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_010345169.1" /GO_function="GO:0004784 - superoxide dismutase activity [Evidence IEA]" /GO_process="GO:0006801 - superoxide metabolic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="superoxide dismutase [Mn]" /protein_id="WP_000122641.1" /translation="MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALE SLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAA IERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGAS GFPIMGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK" gene 7073..8056 /gene="kdgT" /locus_tag="D0D43_RS12645" CDS 7073..8056 /gene="kdgT" /locus_tag="D0D43_RS12645" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_709713.2" /GO_component="GO:0016020 - membrane [Evidence IEA]" /GO_function="GO:0015649 - 2-keto-3-deoxygluconate:proton symporter activity [Evidence IEA]" /GO_process="GO:0046411 - 2-keto-3-deoxygluconate transmembrane transport [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="2-keto-3-deoxygluconate transporter" /protein_id="WP_001166063.1" /translation="MQIKRSIEKIPGGMMLVPLFLGALCHTFSPGAGKYFGSFTNGMI TGTVPILAVWFFCMGASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVE VGFFAGLSTLALVAAMDMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGT AGIASFEPHVFVGAVLPFLVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTV IAQTGLLGILLGVAVIIVTGIPLIIADKLIGGGDGTAGIAASSSAGAAVATPVLIAEM VPAFKPMAPAATSLVATAVIVTSILVPILTSIWSRKVKARAAKIEILGTVK" gene 8205..8879 /gene="yiiM" /locus_tag="D0D43_RS12650" CDS 8205..8879 /gene="yiiM" /locus_tag="D0D43_RS12650" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418346.2" /GO_function="GO:0003824 - catalytic activity [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="6-hydroxyaminopurine reductase" /protein_id="WP_001270260.1" /translation="MRYPVDVYTGKIQAYPEGKPSAIAKIQVDGELMLTELGLEGDEQ AEKKVHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGD IFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPL ELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFS RRLWGK" gene complement(8985..10358) /gene="cpxA" /locus_tag="D0D43_RS12655" CDS complement(8985..10358) /gene="cpxA" /locus_tag="D0D43_RS12655" /EC_number="3.6.1.-" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_312864.1" /GO_function="GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]" /GO_process="GO:0007165 - signal transduction [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="envelope stress sensor histidine kinase CpxA" /protein_id="WP_000580417.1" /translation="MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQR QGLMIEQHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERSEM QIIRNFIGQADNADHPQKKKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLL FDRPLLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEF LAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELER IETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTV NFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVS PEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIW LPLYKRS" gene complement(10355..11053) /gene="cpxR" /locus_tag="D0D43_RS12660" CDS complement(10355..11053) /gene="cpxR" /locus_tag="D0D43_RS12660" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001033718.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="envelope stress response regulator transcription factor CpxR" /protein_id="WP_001033722.1" /translation="MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDS IDLLLLDVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPF NDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALVLNPGRQEASFDGQTLELTGT EFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWF KTLRGRGYLMVSAS" gene 11203..11703 /gene="cpxP" /locus_tag="D0D43_RS12665" CDS 11203..11703 /gene="cpxP" /locus_tag="D0D43_RS12665" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_026277.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="cell-envelope stress modulator CpxP" /protein_id="WP_001223800.1" /translation="MRIVTAAVMASTLAVSSLSHAAEVGSGDNWHPGEELTQRSTQSH MFDGISLTEHQRQQMRDLMQQARHEQPPVNVSELETMHRLVTAENFDENAVRAQAEKM ANEQIARQVEMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQWQKSSSLKLLSS SNSRSQ" gene complement(11890..12870) /locus_tag="D0D43_RS12670" CDS complement(11890..12870) /locus_tag="D0D43_RS12670" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_000985242.1" /GO_function="GO:0003677 - DNA binding [Evidence IEA]" /GO_process="GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="tyrosine-type recombinase/integrase" /protein_id="WP_000985246.1" /translation="MAIKKLDDGRYEVDIRPRGRDGKRIRRKFERKAEALAFERYTIA NASQKEWGGQRADRRTLSELLDIWWKYHGQNHEHGTKEFNHLLKTISGIGDIPVSRMS KRALMDYRSMRLRDGISAATINRDMYRLSGMFTKLIQLDEFSGQHPIHGLPPLAEANP EMTFLEKAEIEKLLNVLAGDDLLVALLCLSTGGRWTEVATLKPAQITNCRVTFLKTKN GKKRTVPISEELEKKVKEEASAKLFKVDYEKFCGILRRVKPDIPPNQATHILRHTFAS HFMMNGGNIIALQQILGHASIQQTMAYAHLAPDYLQNAVALNPLKGGVTL" gene complement(12940..13233) /locus_tag="D0D43_RS12675" CDS complement(12940..13233) /locus_tag="D0D43_RS12675" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_016237179.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="helix-turn-helix domain-containing protein" /protein_id="WP_000777029.1" /translation="MKLSEKIKALREAEGLSQSKFCEIIELPLSTLKKYEGGNFEPGG TALLKITMHPTFQKYALWLMTDKTAPDAGQIAPALAHIGPESTESNHSAKRIG" gene 13370..13642 /locus_tag="D0D43_RS12680" CDS 13370..13642 /locus_tag="D0D43_RS12680" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001583792.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="Cox family DNA-binding protein" /protein_id="WP_001308179.1" /translation="MDAENYVIQYPLDAVHVDKFADLLGKPKTAVSEMVKANKLPIIE LRDPCKPKARAGEKWVFIPEFNRAVREAFYNRPVEQRDAWLLWMGL" gene 13812..14312 /locus_tag="D0D43_RS12685" CDS 13812..14312 /locus_tag="D0D43_RS12685" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_017441883.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="WP_000217670.1" /translation="MTVMTLNLVEKQPAAMRRIIGKHLAVPRWQDTCDYYNQMMERER LTVCFHAQLKQRHATMRFEEMNDVERERLVCAIDELRGAFSKRRQVGASEYAYISFLT VSQRRTLFMHAGLTEKEFNQPYWRINEESCYWRDALFRALRELFSLFEYAPTILTSVK PEQYLH" gene 14376..14600 /locus_tag="D0D43_RS12690" CDS 14376..14600 /locus_tag="D0D43_RS12690" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_016236090.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="DUF2732 family protein" /protein_id="WP_000557698.1" /translation="MHTVSENKCGKYALLLQQARAEAQADAATRFSSHLDAMIRHITK AELSRVEIVELLSQESEKFHNIGLSRGEVL" gene 14600..14902 /locus_tag="D0D43_RS12695" CDS 14600..14902 /locus_tag="D0D43_RS12695" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001277953.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="DUF5405 family protein" /protein_id="WP_001277903.1" /translation="MSCSHSVVLLNNALKIAVMKNGDLSLIQLCLDKEKRDITESVIA IYQSELNLLSDVINLLVKRAVFHKQISSVDELTKLTTELASYCADEFKKLNDKRNW" gene 14902..15126 /locus_tag="D0D43_RS12700" CDS 14902..15126 /locus_tag="D0D43_RS12700" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_016242005.1" /GO_function="GO:0008270 - zinc ion binding [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="TraR/DksA C4-type zinc finger protein" /protein_id="WP_001113264.1" /translation="MPDNVDFIQEQQAELLERQINAARVKHCGASALVCEECDAPIPA ARRAAYPSATRCVSCQSVFEAKNKHYRRTA" gene 15123..15398 /locus_tag="D0D43_RS12705" CDS 15123..15398 /locus_tag="D0D43_RS12705" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_000027668.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="DUF5405 family protein" /protein_id="WP_000027664.1" /translation="MSIRIEIGERYVVTSDSFQFILHEKKRAESGKNAGQEWLAVVGY YPKLSQLVSGLMHHDILTGSAKSFADLNAQVEQLSKRCSEAFGSYGR" gene 15388..17676 /locus_tag="D0D43_RS12710" CDS 15388..17676 /locus_tag="D0D43_RS12710" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_016235436.1" /GO_function="GO:0004519 - endonuclease activity [Evidence IEA]" /GO_process="GO:0006260 - DNA replication [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="replication endonuclease" /protein_id="WP_000268614.1" /translation="MAVKASGRFVPPSAFAAGTGKTFTGAYAWNAPREAVGRERPLTR DEMRQVQGVLSTINRLPYFLRSLFTSRYDYIRRNKSPVHGFYFLTSTFQRRLWPRIER VNQRHEMNTDASLLFLAERDHYARLPGMNDKELKKFAARISSQLFIMYEELCDAWVDA HGEKESLFTDEAQAHLYGHVAGAARAFNISPLYWKKYRKGQMTTRQAYSSIARLFNDE WWTHQLKGQRMRWHEALLIAVGEVNKDRSPYASKHAIRDVRARRQANLEFLKSCDLEN RETGERIDLISKVMGSISNPEIRRMELMNTIAGIERYAAAEGDVGMFITLTAPSKYHP TRQVGKGESKTVQLNHGWNDEAFNPKDAQRYLCHIWSLMRTAFKDNDLQVYGLRVVEP HHDGTPHWHMMLFCNPRQRNQIIEIMRRYALKEDGDERGAARNRFQAKHLNRGGAAGY IAKYISKNIDGYALDGQLDNDTGRPLKDTAAAVTAWASTWRIPQFKTVGLPTMGAYRE LRKLPRGVSIADEFDERVEAARAAADSGDFALYISAQGGANVPRDRQTVRVARSPSDD VNEYEEEVERVVGIYAPHLGARHIHITRTTDWRIVPKVPVVEPLTLKSGIAAPRSPVN NCGKLTGGDTSLSAPTPTEHAAAVLNLVDEGVIEWSDPEVVKALRGALKHNLRTPNRQ QRNGSPLKPYEMAPSARLTRSERMQITRIRVDLAQKGIRPQRWELEVLARGATVSYEG QNFAFTDSHDWSGFAEHFDLFE" gene complement(17907..20114) /locus_tag="D0D43_RS12715" CDS complement(17907..20114) /locus_tag="D0D43_RS12715" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_000423601.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="AAA family ATPase" /protein_id="WP_000423599.1" /translation="MELSLKNVTSYDKNKYTKISLEKRINILYGQNGAGKSTISNFFY NPADDDYRDCRCTNINNYRPLVYNTKFIEDNFFDKDVQKGIFTLSKENTEIEKEISKK REIVKTLKIKLEATKTNYQKIKDRNHDAETSCTESIWLNTEYIRNSDVNSLMAGYLKN KRNLFTKVKSSIRLPDIDLNQLLTDYRELLNHKNTTIQTISPYNPYPISFDDKNLLKT PVIDSSNSYLSETIKKLQNLDWVKKGKENYLVGDICPFCQKETIDDKFTEALEQIFDE SYAQKITSIEKLKYIYELTTQEQLQLLKTQLNDCTAISIEERKTSLAHISSLEKMLKS NIELINNKIQNPSLSVTLDKDKDIEESLLKDIKQYNSRINDLNEKVKQFNLTQDKIKN QFWGALRNYRNTDFEVLEKIQAENDIIIKSLEESIDSINKEIKHTDDEIKELRNKTSN IDTTISSINSKLKNLGITCFYIDKHPTIKNSFVIVRSDNTPSKNVYRSLSEGEKTLIT FLYFIEYCKGQTNTDEFDNRDSLIVIDDPISSLSQNYIYDIASMIHYDIFTSANKVII LTHNLYFFHELIKLAPISERKFNSTYQLFRITKNLHSSFSNISRDSLQNEYQSLWQIL KDARDGKVHNVVIPNTMRNILEYYFAFVHKTNELQDELNRLAQNESNSNFKAFYRYIN RGSHSDSINITDMGEITPDIYITQFKEIFRLMGDISHFNKMYEEKKNIEDTTA" gene complement(20545..21579) /locus_tag="D0D43_RS12720" CDS complement(20545..21579) /locus_tag="D0D43_RS12720" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001752368.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phage portal protein" /protein_id="WP_000038188.1" /translation="MSKKKGKTPQPAVKTMTASAPKMEAFTFGEPVPVLDRRDILDYV ECISNGRWYEPPVSFTGLAKSLRAAVHHSSPIYVKRNILASTFIPHPWLSQQDFSRFV LDFLVFGNAFLEKRYSTTGKVIRLETSPAKYTRRGVEEDVYWWVPSFNEPTAFAPGSV FHLLEPDINQELYGLPEYLSALNSAWLNESATLFRRKYYENGAHAGYIMYVTDAVQDR NDIEMLRENMVKSKGRNNFKNLFLYAPQGKADGIKIIPLSEVATKDDFFNIKKASAAD LLDAHRIPFQLMGGKPENVGSLGDIEKVAKVFVRNELIPLQDRIREINGWLGQEVIRF KNYSLDTDNG" gene complement(21579..23351) /locus_tag="D0D43_RS12725" CDS complement(21579..23351) /locus_tag="D0D43_RS12725" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001357052.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="terminase ATPase subunit family protein" /protein_id="WP_000156861.1" /translation="MTITTDTTLLHDPRRQAALLYWQGFSVPQIAAMLQMKRPTVQSW KQRDGWDSVAPISRVEMSLEARLTQLIIKPQKTGGDFKEIDLLGRQIERLARVNRYSQ TGNEADLNPNVANRNKGGRRKPKKNFFSDEAIEKLEQIFFEQSFDYQLHWYRAGLEHR IRDILKSRQIGATFYFSREALLRALKTGHNQIFLSASKTQAYVFREYIIAFARLVDVD LTGDPIVLGNNGAKLIFLGTNSNTAQSHNGDLYVDEIFWIPNFQVLRKVASGMASQSH LRSTYFSTPSTLAHDAYPFWSGELFNRGRASAAERVEIDVSHNALAGGLLCADGQWRQ IVTIEDALKGGCTLFDIEQLKRENSADDFKNLFMCEFVDDKASVFPFEELQRCMVDTL EEWEDYAPFAANPFGSRPVWIGYDPSHRGDSAGCVVLAPPVVAGGKFRILERHQWKGM DFATQAESIRKLTEKYNVEYIGIDATGLGVGVFQLVRSFYPAARDIRYTPEMKTAMVL KAKDVIRRGCLEYDVSATDITSSFMAIRKTMTSSGRSATYEASRSEEASHADLAWATM HALLNEPLTAGISTPLTSTILEFY" gene 23525..24379 /locus_tag="D0D43_RS12730" CDS 23525..24379 /locus_tag="D0D43_RS12730" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001074418.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="GPO family capsid scaffolding protein" /protein_id="WP_001085953.1" /translation="MAKKVSKFFRIGVEGDTCDGRVISAQDIQEMAETFDPRVYGCRI NLEHLRGILPDGIFKRYGDVAELKAEKIDDDSALKGKWALFAKITPTDDLIAMNKAAQ KVYTSMEIQPNFANTGKCYLVGLAVTDDPASLGTEYLEFCRTAKHNPLNRFKLSPENL ISVATPVELEFEDLPETVFTALTEKVKSIFGRKQASDDARLNDVHEAVTAVAEHVQEK LSATEQRLAEMETAFSALKQEVTDRADETSQAFTRLKNSLDHTESLTQQRRSKATGGG GDALMTNC" gene 24438..25511 /locus_tag="D0D43_RS12735" CDS 24438..25511 /locus_tag="D0D43_RS12735" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001248534.1" /GO_component="GO:0019028 - viral capsid [Evidence IEA]" /GO_function="GO:0005198 - structural molecule activity [Evidence IEA]" /GO_process="GO:0019069 - viral capsid assembly [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phage major capsid protein, P2 family" /protein_id="WP_001248539.1" /translation="MRQETRFKFNAYLSRVAELNGIDAGDVSKKFTVEPSVTQTLMNT MQESSDFLTRINIVPVSEMKGEKIGIGVTGPIASTTDTAGGTERQPKDFSKLASNKYE CDQVNFDFYIRYKTLDLWARYQDFQLRIRNAIIKRQSLDFIMAGFNGVKRAETSDRSS NPMLQDVAVGWLQKYRNEAPARVMSKVTDEEGRTTSEVIRVGKGGDYASLDALVMDAT NNLIEPWYQEDPDLVVIVGRQLLADKYFPIVNKEQDNSEMLAADVIISQKRIGNLPAV RVPYFPADAMLITKLENLSIYYMDDSHRRVIEENPKLDRVENYESMNIDYVVEDYAAG CLVEKIKVGDFSTPARATVEPGA" gene 25515..26258 /locus_tag="D0D43_RS12740" CDS 25515..26258 /locus_tag="D0D43_RS12740" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001540320.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="terminase endonuclease subunit" /protein_id="WP_000203462.1" /translation="MTSPAQRHMMRVSAAMTAQREAAPLRHATVYEQMLVKLAADQRT LKAIYSKELKAAKKRELLPFWLPWVNGVLEQGKGAQDDILMTVMLWRLDTGDIAGALE IARYALKYGLTMPGKHRRTPPYMFTEEVALAAMRAHAAGESVDTRLLTETLELTATAD MPDEVRAKLHKITGLFLRDGGDAAGALAHLQRATQLDCQAGVKKEIERLERELKPKPE PQPKAATRTPRKTRSVTPAKRGRPKKKAS" gene 26358..26867 /locus_tag="D0D43_RS12745" CDS 26358..26867 /locus_tag="D0D43_RS12745" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_005228322.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="head completion/stabilization protein" /protein_id="WP_000988636.1" /translation="MMTLIIPRKEAPVSGEGTVVIPQPAGDEPVIKNTFFFPDIDPKR VRERMRLEQTVAPARLREAIKSGMAETNAELYEYREQKIAAGFTRLADVPADDIDGES IKVFYYERAVCAMATASLYERYRGVDASAKGDKKADSIDSTIDELWRDMRWAVARIQG KPRCIVSQI" gene 26867..27070 /locus_tag="D0D43_RS12750" CDS 26867..27070 /locus_tag="D0D43_RS12750" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_005228323.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="tail protein X" /protein_id="WP_000846399.1" /translation="MKTFALQGDTLDAICVRYYGRTEGVVEAVLAANPGLAELGAVLP HGTAVELPDVQTAPVAETVNLWE" gene 27074..27355 /locus_tag="D0D43_RS12755" CDS 27074..27355 /locus_tag="D0D43_RS12755" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_000123123.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phage holin family protein" /protein_id="WP_000123123.1" /translation="MTAEEKSVLSLFMIGVLIVVGKVLAGGEPITPRLFIGRMLLGGF VSMVAGVVLVQFPDLSLPAVCGIGSMLGIAGYQVIEIAIQRRFKGRGKP" gene 27355..27852 /locus_tag="D0D43_RS12760" CDS 27355..27852 /locus_tag="D0D43_RS12760" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_016235441.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="glycoside hydrolase family 104 protein" /protein_id="WP_001144101.1" /translation="MPVINTHQNIAAFLDMLAVSEGTANHPLTKNRGYDVIVTGLDGK PEIFTDYSDHPFAHGRPAKVFNRRGEKSTASGRYQQLYLFWPHYRKQLALPDFSPLSQ DRLAIQLIRERGALDDIRAGRIERAISRCRNIWASLPGAGYGQREHSLEKLVTVWRTA GGVPA" gene 27867..28292 /locus_tag="D0D43_RS12765" CDS 27867..28292 /locus_tag="D0D43_RS12765" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_000736575.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="DNZ54_00345 family protein" /protein_id="WP_000736576.1" /translation="MKKLSLSLMLNVSLALMLALSLIYPQSVAVNFVAAWAILATVIC VVASGVGVYATEYVLERYGRELPPESLAVKIVTSLFLQPVPWRRRAAALVVMVATFIS LVAAGWIFTALIYLVASVFFRLIRTACRQRFEGRELCQS" gene 28280..28705 /gene="lysB" /locus_tag="D0D43_RS25845" CDS 28280..28705 /gene="lysB" /locus_tag="D0D43_RS25845" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001585210.1" /note="The gene for this Rz-like phage lysis system protein may overlap extensively with the gene for the other spanin subunit, the Rz1-like protein in the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="Rz-like lysis system protein LysB" /protein_id="WP_000040680.1" /translation="MSKLMIVMVVLLSLAVAALFLVKHKNASLRASLDRANNVSSGQQ ATITMLKNQLHVALTRADKNELAQVALRQELENAAKREAQREKTITRLLNENEDFRRW YGADLPDAVRRLHQRPACTDASDCRQRLPESESLPDAGQ" gene 28605..28850 /gene="lysC" /locus_tag="D0D43_RS25755" CDS 28605..28850 /gene="lysC" /locus_tag="D0D43_RS25755" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_014640305.1" /note="LysC is an Rz1-like component of a phage lytic system, substantially overlapping although not fully embedded in the gene for the Rz-like LysB component; Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="Rz1-like lysis system protein LysC" /protein_id="WP_231281852.1" /translation="MLCAGCTSVRPALTPVIVANACPKVSLCPMPGSDPETNGDLSAD IRQLENALARCASQVKMIKHCQDENDAQTRQPAQGAD" gene 28813..29280 /locus_tag="D0D43_RS12780" CDS 28813..29280 /locus_tag="D0D43_RS12780" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001406878.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phage tail protein" /protein_id="WP_000917162.1" /translation="MLKPDSLRRALTDAVTVLKTNPDMLRIFVDNGSIVSTLATSLSF EKRYTLNVIVTDFTGDFDLLIVPVLAWLRENQPDIMTTDEGQKKGFTFYADINNDSSF DISISLMLTERTLVSEVGGALHVKNIPEPPPPEPVTRPMELYINGELVSKWDE" gene 29273..29725 /locus_tag="D0D43_RS12785" CDS 29273..29725 /locus_tag="D0D43_RS12785" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001001795.1" /GO_component="GO:0044423 - virion component [Evidence IEA]" /GO_function="GO:0005198 - structural molecule activity [Evidence IEA]" /GO_process="GO:0016032 - viral process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phage virion morphogenesis protein" /protein_id="WP_001001780.1" /translation="MNEFKRFEDRLTGLIESLSPSGRRRLSAELAKRLRQSQQRRVMA QKAPDGTPYAPRQQQSARKKTGRVKRKMFAKLITSRFLHIRASPEQASMEFYGGKSPK IASVHQFGLSEENRKDGKKIDYPARPLLGFTGEDVQMIEEIILAHLDR" gene 29792..30427 /locus_tag="D0D43_RS12790" CDS 29792..30427 /locus_tag="D0D43_RS12790" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001093708.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phage baseplate assembly protein V" /protein_id="WP_001093730.1" /translation="MNTLANIQELARALRNMIRTGLVVETDLNAGRCRVQTGGMCTDW LQWLTCRAGRSRTWWAPSVGEQVLILAVGGELDTAFVLPGIYSGDNPAPSASADALHI RFPDGAVIEYEPETSALTVSGIKTASVTASDSVTATVPVVTVKASTRVTLDTPEVVCT NRLITGTLEVQKGGTMRGNIEHTGGELSSNGKVLHTHKHPGDSGGTTGGPL" gene 30424..30771 /locus_tag="D0D43_RS12795" CDS 30424..30771 /locus_tag="D0D43_RS12795" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_005228331.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="GPW/gp25 family protein" /protein_id="WP_000127163.1" /translation="MTARYLGMNRSDGLTVTDLEHISQSIGDILRTPVGSRVMRRDYG SLLASMIDQPQTPALELQIKVACYMAVLKWEPRVTLSSVTTARSFDGRMTVTLTGQHN DTGQPLSLTIPVS" gene 30776..31684 /locus_tag="D0D43_RS12800" CDS 30776..31684 /locus_tag="D0D43_RS12800" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001121472.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="baseplate assembly protein" /protein_id="WP_001121488.1" /translation="MPIIDLNQLPAPDVVEELDFETILAERKATLISLYPEDQQEAVA RTLTLESEPLVKLLEENAYRELIWRQRVNEAARAVMLACAAGNDLDVIGANYNTTRLI ITQADDSTIPPTPAVMESDTDYRLRIQQAFEGLSVAGSVGAYQYHGRSADGRVADISV TSPSPACVTISVLSRENNGVASEDLLAVVRNALNGEDVRPVADRVTVQSAAIVEYQIN ATLYLYPGPESEPIRAAAVKKLEAYITAQHRLGRDIRLSAIYAALHVEGVQRVELAAP LADIVLNNTQASFCTEYSVVTGGSDE" gene 31677..32288 /locus_tag="D0D43_RS12805" CDS 31677..32288 /locus_tag="D0D43_RS12805" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_019841548.1" /GO_component="GO:0044423 - virion component [Evidence IEA]" /GO_function="GO:0005198 - structural molecule activity [Evidence IEA]" /GO_process="GO:0016032 - viral process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phage tail protein I" /protein_id="WP_001285307.1" /translation="MSDSRLLPTGSSLLEVAAAKACAEIEKTPVSIRELWNPDTCPAN LLPWLAWSFSVDRWDDKWPEATKRAVIRDAYFIHCHKGTIGAIRRVVEPLGYLIEVRE WWQLNEEPGTFRIVVGVLEQGITEEMYQELERLVADAKPASRHLTGLAISLSTTGNIF AGAGCYHGDALTVYPYTPEAIIVGGDYFPASAIHLIDNLRVNA" gene 32285..>32674 /locus_tag="D0D43_RS25850" /pseudo CDS 32285..>32674 /locus_tag="D0D43_RS25850" /inference="COORDINATES: protein motif:HMM:NF023985.4" /note="incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology." /pseudo /codon_start=1 /transl_table=11 /product="phage tail protein" gene 33074..33484 /locus_tag="D0D43_RS25855" CDS 33074..33484 /locus_tag="D0D43_RS25855" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_308310.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phage tail protein" /protein_id="WP_087548999.1" /translation="MSGKDVAGLLAYLGLGEAAKRNVGTGENQIPDMTSFASGDGWMK LPNGKILQYGRGAITPTLSTQTMRITFSIPFPKKVDCAMLTHSGDGGAPLGAGRGFVM TAEGPTLTGFNSAYRTASTSSTVSMNYSWWAVGE" gene 33505..33948 /locus_tag="D0D43_RS12815" CDS 33505..33948 /locus_tag="D0D43_RS12815" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001624294.1" /GO_process="GO:0098004 - virus tail fiber assembly [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="tail fiber assembly protein" /protein_id="WP_001008235.1" /translation="MNEYVYSARHNAFFPVDMIDKYKSEGWDLSDAKEVNQNIISEFM AEPPQGKIRIAGDDGLPAWADIPPPTHEELIEITESERQLLINQANEYMNSKQWPGKA AIGRLKGEELAQYNLWLDYLDALELVDTSSAPDIEWPTPPVTQAS" gene complement(33920..34315) /locus_tag="D0D43_RS12820" CDS complement(33920..34315) /locus_tag="D0D43_RS12820" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_000639075.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="tail fiber assembly protein" /protein_id="WP_000639074.1" /translation="MIYFSKSTNGFFFDGINSDMPADIVEISTDLYNELIAGQQEGGK LITSDENGLPVLKSPAIDYVARAENQRMQLLAHADNVTADWRVELMLGDISSTDKEKL SAWMDYKKEVKAVDTSTAPEISWPELPEV" gene complement(34324..34728) /locus_tag="D0D43_RS12825" CDS complement(34324..34728) /locus_tag="D0D43_RS12825" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001115558.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="gp53-like domain-containing protein" /protein_id="WP_001127577.1" /translation="MPLARYLCIFINVGLGEAAKRNVGNGQNQIPDMAAFASSLSSTG FQKLPSGLIIQWGIVSGASNYTVTYPVTFPNRSLALLAVPHTTSVAGISAMGIANCSD ISKSQFYIIVGGISQGEIVKYERSCFWVAIGV" gene 34759..35352 /locus_tag="D0D43_RS12830" CDS 34759..35352 /locus_tag="D0D43_RS12830" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001755143.1" /GO_function="GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]" /GO_process="GO:0006310 - DNA recombination [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="recombinase family protein" /protein_id="WP_001690910.1" /translation="MLIGYVRVSTNDQNTELQRNALECAGCERIFEDKISGTKSDRPG LKKLLRTLSAGDTLVVWKLDRLGRSMRHLVILVEELRERGVNFRSLTDAIDTSTPMGR FFFHVMGALAEMERELIVERTRAGLEAARAKGRIGGRRPKLTASEWEQAGRLLAAGES RQRVALIFDIGQSTLYKKFPSSAAENKLCHPLANRDK" gene 35412..36602 /locus_tag="D0D43_RS12835" CDS 35412..36602 /locus_tag="D0D43_RS12835" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001483446.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phage tail sheath protein" /protein_id="WP_001690909.1" /translation="MSDYHHGVQVLEINDGTRVISTVSTAIVGMVCTASDADAETFPV NKPVLITNVQSAIAKAGKKGTLAASLQAIADQSKPVTVVVRVEDGTGDDEETKLAQTV SNIIGTTDENGQYTGLKALLAAESVTGVKPRILGVPGLDTKEVAVALASVCQKLRAFG YISAWGCKTISEVKAYRQNFSQRELMVIWPDFLAWDTATSTTATAYATARALGLRAKI DQEQGWHKTLSNVGVNGVTGISASVFWDLQESGTDADLLNESGITTLIRRDGFRFWGN RTCSDDPLFLFENYTRTAQVLADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKT NGYIVDATCWFSEESNDAETLKAGKLYIDYDYTPVPPLENLTLRQRITDKYLANLVTS VNSN" gene 36615..37133 /locus_tag="D0D43_RS12840" CDS 36615..37133 /locus_tag="D0D43_RS12840" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001554312.1" /GO_component="GO:0044423 - virion component [Evidence IEA]" /GO_function="GO:0005198 - structural molecule activity [Evidence IEA]" /GO_process="GO:0016032 - viral process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phage major tail tube protein" /protein_id="WP_001251408.1" /translation="MAMPRKLKLMNVFLNGYSYQGVAKSVTLPKLTRKLENYRGAGMN GSAPVDLGLDDDALSMEWSLGGFPDSVIWELYAATGVDAVPIRFAGSYQRDDTGETVA VEVVMRGRQKEIDTGEGKQGEDTESKISVVCTYFRLTMDGKELVEIDTINMIEKVNGV DRLEQHRRNIGL" gene 37190..37465 /locus_tag="D0D43_RS12845" CDS 37190..37465 /locus_tag="D0D43_RS12845" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001719230.1" /GO_process="GO:0098003 - viral tail assembly [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phage tail assembly protein" /protein_id="WP_001031303.1" /translation="MNKENVITLDNPVKRGEQVIEQVTLMKPNAGTLRGVSLAAVANS EVDALIKVLPRMTAPMLTEQEVAALELPDLVALAGKVVGFLSPNSVQ" gene 37462..37617 /locus_tag="D0D43_RS12850" CDS 37462..37617 /locus_tag="D0D43_RS12850" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_000143828.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="GpE family phage tail protein" /protein_id="WP_000143830.1" /translation="MTFPKNLSVDDLMADVAVIFHWPPSELYPMSLTELITWREKALR RSGNTNE" gene 37610..40057 /locus_tag="D0D43_RS12855" CDS 37610..40057 /locus_tag="D0D43_RS12855" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_005228341.1" /GO_function="GO:0005198 - structural molecule activity [Evidence IEA]" /GO_process="GO:0016032 - viral process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phage tail tape measure protein" /protein_id="WP_000069918.1" /translation="MSNNVKLQVLLRAVDQASRPFKSIRTASKSLSGDIRDTQKSLRE LNGQASRIEGFRKTSAQLAVTGQELKKARQEAAALAVQFKNTERPTNAQAKAMEAARK NASELQAKYNSLRLSVQRQRQELSQAGINTRNLAHDERGLKNRISETTAQLNRQRDAL ARVSAQQAKLNAVKQRYQAGKELAGNMASVGAAGVGIAAAGTMAGVKLLMPGYEFAQK NSELQAVLGVAKDSAEMTALRKQARQLGDNTAASADDAAGAQIIIAKAGGDVDAIQAA TPVTLNMALANRRTMEENAALLMGMKSAFQLSNDKVAHIGDVLSMTMNKTAADFDGMS DALTYAAPVAKNAGVSIEETAAMVGALHDAKITGSMAGTGSRAVLSRLQAPTGKAWDA LKELGVKTSDSKGNTRPVFTILKEMQASFEKNRLGTAQQAEYMKTIFGEEASSAAAVL MTAASTGKLDKLTAAFKASDGKTAELVNIMQDNLGGDFKEFQSAYEAVGTDLFDQQEG ALRKLTQTATKYVLKLDGWIQKNKSLASTIGLIVGGALALIGIIGAIGLVAWPVITGI NAIIAAAGAMGAIFTTVSSAVMTAIGAISWPVVAVVAAIVAGALLIRKYWEPVSAFFG GVVEGLKAAFAPVGELFTPLKPVFDWLGEKLQAAWQWFKNLIAPVKATQDTLNRCRDT GVMFGQALADALMLPLNAFNKLRSGIDWVLEKLGVINKESDTLDQTAARTQAATYGSG GYIPATSSYAGYQAYQPVTAPAGRSYVDQSKNEYHISLTGGTAPGTQLDRQLQDALEK YERDKRARARASMMHDG" gene 40072..40551 /locus_tag="D0D43_RS12860" CDS 40072..40551 /locus_tag="D0D43_RS12860" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_000978924.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phage tail protein" /protein_id="WP_000978907.1" /translation="MMLALGMFVFMRQTLPHQTMQRESDYRWPSNSRIGKRDAYQFLG VGEENITLAGVLYPELTGGKLTMTTLRLMAEEGRAWPLLDGTGMIYGMYVISRVSETG SIFFADGTPRKIDFTLSLTRVDESLAALYGDIGKQAESLIGKAGSMATKFTGMTGAG" gene 40551..41714 /locus_tag="D0D43_RS12865" CDS 40551..41714 /locus_tag="D0D43_RS12865" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_016157990.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phage late control D family protein" /protein_id="WP_000882927.1" /translation="MLDALTFDAGSTLTPDYMLMLDSRDITGNISDRLMSMTLTDNRG FEADQLDIELDDADGQVGLPVRGAVLTVYIGWKGFALVCKGKFTVDEVEHRGAPDVVT IRARSADFRGTLNSRREGSWHDTTLGAIVEAIASRNRLEASVAPSLARIKIPHIDQSQ ESDAKFLTRLAERNGGEVSVKMGKLLFLKAGQGVTASGKKIPQITITRSDGDRHHFAI ADRGAYTGVTAKWLHTKDPKPQKQKVKLKRKKKEKHLRALEHPKAKPVTQKKAPKVPE AREGEYMAGEADNVFALTTVYATKAQAMRAAQAKWDKLQRGVAEFSISLATGRADIYT ETPARVSGFKRVIDEQDWTITKVTHFLNNSGFTTSLELEVRLSDVEYETEGNE" gene 41796..42014 /gene="ogrK" /locus_tag="D0D43_RS12870" CDS 41796..42014 /gene="ogrK" /locus_tag="D0D43_RS12870" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_416586.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="prophage transcriptional regulator OgrK" /protein_id="WP_000468308.1" /translation="MFHCPLCQHAAHARTSRYITDTTKERYHQCQNVNCSATFITYES VQRYIVKPGEVHAVRPHPLPSGQQIMWM" gene 42251..43153 /gene="fieF" /locus_tag="D0D43_RS12875" CDS 42251..43153 /gene="fieF" /locus_tag="D0D43_RS12875" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_312867.1" /GO_component="GO:0016020 - membrane [Evidence IEA]" /GO_function="GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]" /GO_process="GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]" /note="FieF, a metal efflux transporter, is a member of the CDF (cation diffusion facilitator) family of transporters; Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="CDF family cation-efflux transporter FieF" /protein_id="WP_001076742.1" /translation="MNQSYGRLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALV DSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMFISGSALFLFLTGI QHLISPTPMTDPGVGVIVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMM NGAILLALGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEI IDIVTSWPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFP GSDVIIHQDPCSVVPREGKRSMLS" gene 43334..44296 /gene="pfkA" /locus_tag="D0D43_RS12880" CDS 43334..44296 /gene="pfkA" /locus_tag="D0D43_RS12880" /EC_number="2.7.1.11" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_014072359.1" /GO_function="GO:0005524 - ATP binding [Evidence IEA]" /GO_process="GO:0006002 - fructose 6-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="6-phosphofructokinase" /protein_id="WP_000591795.1" /translation="MIKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLG LYEDRMVQLDRYSVSDMINRGGTFLGSARFPEFRDENIRAVAIENLKKRGIDALVVIG GDGSYMGAMRLTEMGFPCIGLPGTIDNDIKGTDYTIGFFTALSTVVEAIDRLRDTSSS HQRISVVEVMGRYCGDLTLAAAIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAI VAITEHMCDVDELAHFIEKETGRETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLL LAGYGGRCVGIQNEQLVHHDIIDAIENMKRPFKGDWLDCAKKLY" gene 44616..45605 /gene="sbp" /locus_tag="D0D43_RS12885" CDS 44616..45605 /gene="sbp" /locus_tag="D0D43_RS12885" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_005133064.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="sulfate/thiosulfate ABC transporter substrate-binding protein Sbp" /protein_id="WP_001045683.1" /translation="MNKWGVGLTFLLAATSVMAKDIQLLNVSYDPTRELYEQYNKAFS AHWKQQTGDNVVIRQSHGGSGKQATSVINGIEADVVTLALAYDVDAIAERGRIDKEWI KRLPDNSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAW GYALHHNNNDQAKAQDFIRALYKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLA ANELGKDKFEIVTPSESILAEPTVSVVDKVVEKKGTKEVAEAYLKYLYSPEGQEIAAK NYYRPRDAEVAKKYENAFPKLKLFTIDEEFGGWTKAQKEHFANGGTFDQISKR" gene 45712..46467 /gene="cdh" /locus_tag="D0D43_RS12890" CDS 45712..46467 /gene="cdh" /locus_tag="D0D43_RS12890" /EC_number="3.6.1.26" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418353.1" /GO_component="GO:0016020 - membrane [Evidence IEA]" /GO_function="GO:0008715 - CDP-diacylglycerol diphosphatase activity [Evidence IEA]" /GO_process="GO:0008654 - phospholipid biosynthetic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="CDP-diacylglycerol diphosphatase" /protein_id="WP_001326656.1" /translation="MKKAGLLFLVMIVIAVVAAGIGYWKLTGEESDTLRKIVLEECLP NQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFW LAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVRKQLDNNLAN ISSRWLPLPGGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGRYGLAMVRQS DNSFVLLATQRNLLTLNRASAEEIQDHQCEILR" gene complement(46522..47289) /gene="tpiA" /locus_tag="D0D43_RS12895" CDS complement(46522..47289) /gene="tpiA" /locus_tag="D0D43_RS12895" /EC_number="5.3.1.1" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_312871.1" /GO_function="GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]" /GO_process="GO:0006096 - glycolytic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="triose-phosphate isomerase" /protein_id="WP_001216327.1" /translation="MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPE MYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYH KESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFE GAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNA AELFAQPDIDGALVGGASLKAETFAVIVKAAEAAKQA" gene complement(47397..47996) /gene="yiiQ" /locus_tag="D0D43_RS12900" CDS complement(47397..47996) /gene="yiiQ" /locus_tag="D0D43_RS12900" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_312872.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="YiiQ family protein" /protein_id="WP_000802214.1" /translation="MKPGCTLFFLLCSALTVTTAAHAQTPDTATTAPYLLAGAPTFDL SISQFREDFNSQNPSLPLNEFRAIDSSPDKANLTRAASKINENLYASTALERGTLKIK SIQMTWLPIQGPEQKAAKAKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYY TETEGALRYVVADNGEKGLTFAVEPIKLALSESLEGLNK" gene 48097..48537 /gene="yiiR" /locus_tag="D0D43_RS12905" CDS 48097..48537 /gene="yiiR" /locus_tag="D0D43_RS12905" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_312873.1" /GO_component="GO:0005886 - plasma membrane [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="DUF805 domain-containing protein" /protein_id="WP_000155257.1" /translation="MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLVLFSLAGKNLLDI QTAAFCLVCLLWPTAAVTVKRLHDRGRSGAWAFLMIVAWMLLAGNWAILPGVWQWAVG RFVPTLILVMMLIDLGAFVGTQGENKYGKDTQDVKYKADNKSSN" gene 48749..49048 /gene="yiiS" /locus_tag="D0D43_RS12910" CDS 48749..49048 /gene="yiiS" /locus_tag="D0D43_RS12910" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418357.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="DUF406 domain-containing protein" /protein_id="WP_000655989.1" /translation="MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFM TKLKELAAATSSADEGASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA" gene 49075..49503 /gene="uspD" /locus_tag="D0D43_RS12915" CDS 49075..49503 /gene="uspD" /locus_tag="D0D43_RS12915" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418358.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="universal stress protein UspD" /protein_id="WP_000323547.1" /translation="MAYKHIGVAISENEEDALLVNKALELARHNDAHLTLIHIDDGLS ELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKE QCDLLVCGHHHSFINRLMPAYRGMINKMSADLLIVPFIDK" gene complement(49508..50254) /gene="fpr" /locus_tag="D0D43_RS12920" CDS complement(49508..50254) /gene="fpr" /locus_tag="D0D43_RS12920" /EC_number="1.18.1.2" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418359.1" /GO_function="GO:0004324 - ferredoxin-NADP+ reductase activity [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="ferredoxin--NADP(+) reductase" /protein_id="WP_000796332.1" /translation="MADWVTGKVTKVQNWTDALFSLTVHAPVLPFTAGQFTKLGLEID GERVQRAYSYVNSPDNPDLEFYLVTVPDGKLSPRLAALKPGDEVQVVSEAAGFFVLDE VPHCETLWMLATGTAIGPYLSILQLGKDLDRFKNLVLVHAARYAADLSYLPLMQELEK RYEGKLRIQTVVSRETAAGSLTGRIPALIESGELESTIGLPMNKETSHVMLCGNPQMV RDTQQLLKETRQMTKHLRRRPGHMTAEHYW" gene complement(50351..51361) /gene="glpX" /locus_tag="D0D43_RS12925" CDS complement(50351..51361) /gene="glpX" /locus_tag="D0D43_RS12925" /EC_number="3.1.3.11" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418360.1" /GO_function="GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]" /GO_process="GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006071 - glycerol metabolic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="class II fructose-bisphosphatase" /protein_id="WP_001250644.1" /translation="MRRELAIEFSRVTESAALAGYKWLGRGDKNTADGAAVNAMRIML NQVNIDGTIVIGEGEIDEAPMLYIGEKVGTGRGDAVDIAVDPIEGTRMTAMGQANALA VLAVGDKGCFLNAPDMYMEKLIVGPGAKGTIDLNLPLADNLRNVAAALGKPLSELTVT ILAKPRHDAVIAEMQQLGVRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSA AVIRALDGDMNGRLLARHDVKGDNEENRRIGEQELARCKAMGIEAGKVLRLGDMARSD NVIFSATGITKGDLLEGISRKGNIATTETLLIRGKSRTIRRIQSIHYLDRKDPEMQVH IL" gene complement(51496..53004) /gene="glpK" /locus_tag="D0D43_RS12930" CDS complement(51496..53004) /gene="glpK" /locus_tag="D0D43_RS12930" /EC_number="2.7.1.30" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_312878.1" /GO_function="GO:0004370 - glycerol kinase activity [Evidence IEA]" /GO_process="GO:0006072 - glycerol-3-phosphate metabolic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="glycerol kinase GlpK" /protein_id="WP_000136788.1" /translation="MTEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPG WVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAI VWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGE LLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEV RRSSEVYGQTNIGGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNT GEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFA TKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDV LEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGL AVGFWQNLDELQEKAVIEREFRPGIETTERNYRYAGWKKAVKRAMAWEEHDE" gene complement(53027..53872) /gene="glpF" /locus_tag="D0D43_RS12935" CDS complement(53027..53872) /gene="glpF" /locus_tag="D0D43_RS12935" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_312879.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="glycerol uptake facilitator protein GlpF" /protein_id="WP_000084268.1" /translation="MSQTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEI SVIWGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAA LVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILM GLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAG WGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRHLPCDICVVEEKETTTPSE QKASL" gene 54297..54542 /gene="zapB" /locus_tag="D0D43_RS12940" CDS 54297..54542 /gene="zapB" /locus_tag="D0D43_RS12940" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418363.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="septal ring assembly protein ZapB" /protein_id="WP_001296623.1" /translation="MTMSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQ NAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV" gene complement(54627..55112) /gene="rraA" /locus_tag="D0D43_RS12945" CDS complement(54627..55112) /gene="rraA" /locus_tag="D0D43_RS12945" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001392924.1" /GO_function="GO:0008428 - ribonuclease inhibitor activity [Evidence IEA]" /GO_process="GO:0051252 - regulation of RNA metabolic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="ribonuclease E activity regulator RraA" /protein_id="WP_000872908.1" /translation="MKYDTSELCDIYQEDVNVVEPLFSNFGGRASFGGQIITVKCFED NGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDL EELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI E" gene complement(55205..56131) /gene="menA" /locus_tag="D0D43_RS12950" CDS complement(55205..56131) /gene="menA" /locus_tag="D0D43_RS12950" /EC_number="2.5.1.74" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418365.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="1,4-dihydroxy-2-naphthoate polyprenyltransferase" /protein_id="WP_000139496.1" /translation="MTEQQISRTQAWLESLRPKTLPLAFAAIIVGTALAWWQGHFDPL VALLALITAGLLQILSNLANDYGDAVKGSDKPDRIGPLRGMQKGVITQQEMKRALIIT VVLICLSGLALVAVACHTLADFVGFLILGGLSIIAAITYTVGNRPYGYIGLGDISVLV FFGWLSVMGSWYLQAHTLIPALILPATACGLLATAVLNINNLRDINSDRENGKNTLVV RLGEVNARRYHACLLMGSLVCLALFNLFSLHSLWGWLFLLAAPLLVKQARYVMREMDP VAMRPMLERTVKGALLTNLLFVLGIFLSQWAA" gene complement(56198..57529) /gene="hslU" /locus_tag="D0D43_RS12955" CDS complement(56198..57529) /gene="hslU" /locus_tag="D0D43_RS12955" /EC_number="3.4.25.2" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1" /GO_function="GO:0005524 - ATP binding [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]" /GO_process="GO:0006508 - proteolysis [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="HslU--HslV peptidase ATPase subunit" /protein_id="WP_001293341.1" /translation="MSEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEEL RHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRD LTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFR KKLREGQLDDKEIEIDLAAAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKI KDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREG VQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQA LTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGA RRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL" gene complement(57539..58069) /gene="hslV" /locus_tag="D0D43_RS12960" CDS complement(57539..58069) /gene="hslV" /locus_tag="D0D43_RS12960" /EC_number="3.4.25.2" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_312886.1" /GO_function="GO:0004298 - threonine-type endopeptidase activity [Evidence IEA]" /GO_process="GO:0051603 - proteolysis involved in protein catabolic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="ATP-dependent protease subunit HslV" /protein_id="WP_000208242.1" /translation="MTTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVI AGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADET ASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDIC IYTNHFHTIEELSYKA" gene complement(58162..59121) /gene="ftsN" /locus_tag="D0D43_RS12965" CDS complement(58162..59121) /gene="ftsN" /locus_tag="D0D43_RS12965" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418368.1" /GO_function="GO:0042834 - peptidoglycan binding [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="cell division protein FtsN" /protein_id="WP_000068828.1" /translation="MAQRDYVRRSQPAPSRRKKSTSRKKQRNLPAVSPAMVAIAAAVL VTFIGGLYFITHHKKEESETLQSQKVTGNGLPPKPEERWRYIKELESRQPGVRAPTEP SAGGEVKTPEQLTPEQRQLLEQMQADMRQQPTQLVEVPWNEQTPEQRQQTLQRQRQAQ QLAEQQRLAQQSRTTEQSWQQQTRTSQAAPVQAQPRQSKPASSQQPYQDLLQTPAHTT AQSKPQQAAPVARAADAPKPTAEKKDERRWMVQCGSFRGAEQAETVRAQLAFEGFDSK ITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNCIRLAAGG" gene complement(59213..60238) /gene="cytR" /locus_tag="D0D43_RS12970" CDS complement(59213..60238) /gene="cytR" /locus_tag="D0D43_RS12970" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_312888.1" /GO_function="GO:0003677 - DNA binding [Evidence IEA]" /GO_process="GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="DNA-binding transcriptional regulator CytR" /protein_id="WP_000644904.1" /translation="MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRV EKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDPFFSEIIRGIEVTAANHGYLVLI GDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVD PQYIARGDFTFEAGSKAMQQLLDLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLS IIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHVGSGSRLMDCELIIR GSTRALP" gene complement(60394..62592) /gene="priA" /locus_tag="D0D43_RS12975" CDS complement(60394..62592) /gene="priA" /locus_tag="D0D43_RS12975" /EC_number="3.6.1.-" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418370.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="primosomal protein N'" /protein_id="WP_001333520.1" /translation="MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIG IVVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI LLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEF NDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAIGAIHSAADTFS AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL HSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWR YHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVL DLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDH YYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPIS RIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSA DFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAE RRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPK RGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIEG" gene 62795..63007 /gene="rpmE" /locus_tag="D0D43_RS12980" CDS 62795..63007 /gene="rpmE" /locus_tag="D0D43_RS12980" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_312890.1" /GO_component="GO:0005840 - ribosome [Evidence IEA]" /GO_function="GO:0003735 - structural constituent of ribosome [Evidence IEA]" /GO_process="GO:0006412 - translation [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="50S ribosomal protein L31" /protein_id="WP_000710769.1" /translation="MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFF TGKQRDVATGGRVDRFNKRFNIPGSK" gene complement(63068..63676) /gene="yiiX" /locus_tag="D0D43_RS12985" CDS complement(63068..63676) /gene="yiiX" /locus_tag="D0D43_RS12985" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418372.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="YiiX family permuted papain-like enzyme" /protein_id="WP_000797353.1" /translation="MKNRLLILSLLVSVPAFAWQPQTGDIIFQISRSSQSKAIQLATH TDYSHTGMLVIRNKKPYVFEAVGPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQK LAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSSPQV QAKLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEWPLFSW" gene complement(63860..64177) /gene="metJ" /locus_tag="D0D43_RS12990" CDS complement(63860..64177) /gene="metJ" /locus_tag="D0D43_RS12990" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="met regulon transcriptional regulator MetJ" /protein_id="WP_000852812.1" /translation="MAEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRR QVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPET WEY" gene 64454..65614 /gene="metB" /locus_tag="D0D43_RS12995" CDS 64454..65614 /gene="metB" /locus_tag="D0D43_RS12995" /EC_number="2.5.1.48" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418374.1" /GO_function="GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]" /GO_process="GO:0019346 - transsulfuration [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="cystathionine gamma-synthase" /protein_id="WP_001295694.1" /translation="MTRKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAH DYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYG GSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKIC HLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDV VTELAWWANNIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLY HPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLI SHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAANKG" gene 65617..68049 /gene="metL" /locus_tag="D0D43_RS13000" CDS 65617..68049 /gene="metL" /locus_tag="D0D43_RS13000" /EC_number="1.1.1.3" /EC_number="2.7.2.4" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_000110794.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="bifunctional aspartate kinase/homoserine dehydrogenase II" /protein_id="WP_000110772.1" /translation="MSVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDM MVVSAAGSTTNQLINWLKLSQTDRLSAHQVQQTLRRYQCDLISGLLPAEEADSLISAF VSDLERLAALLDSGINDAVYAEVVGHGEVWSARLMSAVLNQQGLPAAWLDAREFLRAE RAAQPQVDEGLSYPLLQQLLVQHPGKRLVVTGFISRNNAGETVLLGRNGSDYSATQIG ALAGVSRVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASELARLAAPVLHARTLQPV SGSEIDLQLRCSYTPDQGSTRIERVLASGTGARIVTSHDDVCLIEFQVPASQDFKLAH KEIDQILKRAQVRPLAVGVHNDRQLLQFCYTSEVADSALKILDEAGLPGELRLRQGLA LVAMVGAGVTRNPLHCHRFWQQLKGQPVEFTWQSDDGISLVAVLRTGPTESLIQGLHQ SVFRAEKRIGLVLFGKGNIGSRWLELFAREQSTLSARTGFEFVLAGVVDSRRSLLSYD GLDASRALAFFNDEAVEQDEESLFLWMRAHPYDDLVVLDVTASQQLADQYLDFASHGF HVISANKLAGASDSNKYRQIHDAFEKTGRHWLYNATVGAGLPINHTVRDLIDSGDTIL SISGIFSGTLSWLFLQFDGSVPFTELVDQAWQQGLTEPDPRDDLSGKDVMRKLVILAR EAGYNIEPDQVRVESLVPAHCEGGSIDHFFENGDELNEQMVQRLEAAREMGLVLRYVA RFDANGKARVGVEAVREDHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGA IQSDINRLAQLL" gene complement(68188..68322) /locus_tag="D0D43_RS26085" CDS complement(68188..68322) /locus_tag="D0D43_RS26085" /inference="COORDINATES: ab initio prediction:GeneMarkS-2+" /note="Derived by automated computational analysis using gene prediction method: GeneMarkS-2+." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="WP_000660586.1" /translation="MKEKPKGVNRKMTNDGEEKSGKMKKLQDGKKKKIRYAKQTGLQI " gene 68398..69288 /gene="metF" /locus_tag="D0D43_RS13005" CDS 68398..69288 /gene="metF" /locus_tag="D0D43_RS13005" /EC_number="1.5.1.20" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418376.1" /GO_function="GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]" /GO_process="GO:0009086 - methionine biosynthetic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="methylenetetrahydrofolate reductase" /protein_id="WP_000007529.1" /translation="MSFFHASQRDALNQSLAEVQGQINVSFEFFPPRTSEMEQTLWNS IDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKERTGLEAAPHLTCIDATPDELRTI ARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPEAK SAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFK QAKKFADMTNVRIPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYT LNRAEMSYAICHTLGVRPGL" gene 69617..71797 /gene="katG" /locus_tag="D0D43_RS13010" CDS 69617..71797 /gene="katG" /locus_tag="D0D43_RS13010" /EC_number="1.11.1.21" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418377.1" /GO_function="GO:0004096 - catalase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]" /GO_process="GO:0006979 - response to oxidative stress [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="catalase/peroxidase HPI" /protein_id="WP_001295695.1" /translation="MSTSDDIHNTTATGKCPFHQGGHDQSAGAGTTTRDWWPNQLRVD LLNQHSNRSNPLGEDFDYRKEFSKLDYYGLKKDLKALLTESQPWWPADWGSYAGLFIR MAWHGAGTYRSIDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWA DLFILAGNVALENSGFRTFGFGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLG ATEMGLIYVNPEGPDHSGEPLSAAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAG PTSNVGPDPEAAPIEEQGLGWASTYGSGVGADAITSGLEVVWTQTPTQWSNYFFENLF KYEWVQTRSPAGAIQFEAVDAPEIIPDPFDPSKKRKPTMLVTDLTLRFDPEFEKISRR FLNDPQAFNEAFARAWFKLTHRDMGPKSRYIGPEVPKEDLIWQDPLPQPIYNPTEQDI IDLKFAIADSGLSVSELVSVAWASASTFRGGDKRGGANGARLALMPQRDWDVNAAAVR ALPVLEKIQKESGKASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQDQTDI EMFELLEPIADGFRNYRARLDVSTTESLLIDKAQQLTLTAPEMTALVGGMRVLGANFD GSKNGVFTDRVGVLSNDFFVNLLDMRYEWKATDESKELFEGRDRETGEVKFTASRADL VFGSNSVLRAVAEVYASSDAHEKFVKDFVAAWVKVMNLDRFDLL" gene 71890..72795 /gene="yijE" /locus_tag="D0D43_RS13015" CDS 71890..72795 /gene="yijE" /locus_tag="D0D43_RS13015" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418378.4" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="cystine transporter YijE" /protein_id="WP_001271242.1" /translation="MSAAGKSNPLAISGLVVLTLIWSYSWIFMKQVTSYIGAFDFTAL RCIFGALVLFIVLLLRGRGMRPTPFKYTLAIALLQTCGMVGLAQWALVSGGAGKVAIL SYTMPFWVVIFAALFLGERLRRGQYFAILIAAFGLFLVLQPWQLDFSSMKSAMLAILS GVSWGASAIVAKRLYARHPRVDLLSLTSWQMLYAALVMSVVALLVPQREIDWQPTVFW ALAYSAILATALAWSLWLFVLKNLPASIASLSTLAVPVCGVLFSWWLLGENPGAVEGS GIVLIVLALALVSRKKKEAVSVKRI" gene complement(72822..73439) /gene="yijF" /locus_tag="D0D43_RS13020" CDS complement(72822..73439) /gene="yijF" /locus_tag="D0D43_RS13020" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418379.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="DUF1287 domain-containing protein" /protein_id="WP_000647894.1" /translation="MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGAR QQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFA EYPQKWKLKRSDSNIDHRRVPNLETWFSRHDKTRPTSKNPSDYQAGDIVSWRLDNGLA HIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFNWRMVGHYRYFVK" gene complement(73714..74817) /gene="gldA" /locus_tag="D0D43_RS13025" CDS complement(73714..74817) /gene="gldA" /locus_tag="D0D43_RS13025" /EC_number="1.1.1.6" /EC_number="1.1.1.75" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418380.4" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="bifunctional L-1,2-propanediol dehydrogenase/glycerol dehydrogenase" /protein_id="WP_000374004.1" /translation="MDRIIQSPGKYIQGADVINRLGEYLKPLAERWLVVGDKFVLGFA QSTVEKSFKDAGLVVEIAPFGGECSQNEIDRLRGIAETAQCGAILGIGGGKTLDTAKA LAHFMGVPVAIAPTIASTDAPCSALSVIYTDEGEFDRYLLLPNNPNMVIVDTKIVAGA PARLLAAGIGDALATWFEARACSRSGATTMAGGKCTQAALALAELCYNTLLEEGEKAM LAAEQHVVTPALERVIEANTYLSGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVA FGTLTQLVLENAPVEEIETVAALSHAVGLPITLAQLDIKEDVPAKMRIVAEAACAEGE TIHNMPGGATPDQVYAALLVADQYGQRFLQEWE" gene complement(74828..75490) /gene="fsa" /locus_tag="D0D43_RS13030" CDS complement(74828..75490) /gene="fsa" /locus_tag="D0D43_RS13030" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418381.1" /GO_function="GO:0016832 - aldehyde-lyase activity [Evidence IEA]" /GO_process="GO:0005975 - carbohydrate metabolic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="fructose-6-phosphate aldolase" /protein_id="WP_000424840.1" /translation="MELYLDTANVAEVERLARIFPIAGVTTNPSIIAASKESIWEVLP RLQKAIGDEGILFAQTMSRDAQGMVEEAKRLRDAIPGIVVKIPVTSEGLAAIKILKKE GITTLGTAVYSAAQGLLAALAGAKYVAPYVNRVDAQGGDGIRTVQELQTLLEMHAPES MVLAASFKTPRQALDCLLAGCESITLPLDVAQQMLNTPAVESAIEKFEHDWNAAFGTT HL" gene complement(75502..78003) /gene="ptsP" /locus_tag="D0D43_RS13035" CDS complement(75502..78003) /gene="ptsP" /locus_tag="D0D43_RS13035" /EC_number="2.7.3.9" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_026278.1" /GO_function="GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]" /GO_process="GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate--protein phosphotransferase" /protein_id="WP_001174079.1" /translation="MALIVEFICELPNGVHARPASHVETLCNTFSSQIEWHNLRTDRK GNAKSALALIGTDTLAGDNCQLLISGADEQEAHQRLSQWLRDEFPHCDAPLAEVKSDE LEPLPVSLTNLNPQIIRARTVCSGSAGGILTPISSLDLNALGNLPAAKGVDAEQSALE NGLTLVLKNIEFRLLDSDGATSAILEAHRSLAGDTSLREHLLAGVSAGLSCAEAIVAS ANHFCEEFSRSSSSYLQERALDVRDVCFQLLQQIYGEQRFPAPGKLTQPAICMADELT PSQFLELDKNHLKGLLLKSGGTTSHTVILARSFNIPTLVGVDIDALTPWQQQTIYIDG NAGAIVVEPGEAVARYYQQEARVQDALREQQRVWLTQQARTADGIRIEIAANIAHSVE AQAAFGNGAEGVGLFRTEMLYMDRTSAPGESELYNIFCQALESANGRSIIVRTMDIGG DKPVDYLNIPAEANPFLGYRAVRIYEEYASLFTTQLRSILRASAHGSLKIMIPMISSM EEILWVKEKLAEAKQQLRNEHIPFDEKIQLGIMLEVPSVMFIIGQCCEEIDFFSIGSN DLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYAVQAVHRQGKWIGLCGELGAKGSVL PLLVGLGLDELSMSAPSIPAAKARMAQLDSRECRKLLNQAMACRTSLEVEHLLAQFRM TQQDAPLVTAECITLESDWRSKEEVLKGMTDNLLLAGRCRYPRKLEADLWAREAVFST GLGFSFAIPHSKSEHIEQSTISVARLQAPVRWGDDEAQFIIMLTLNKHAAGDQHMRIF SRLARRIMHEEFRNALVNAASADAIASLLQHELEL" gene 78312..79391 /gene="frwC" /locus_tag="D0D43_RS13040" CDS 78312..79391 /gene="frwC" /locus_tag="D0D43_RS13040" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418384.1" /GO_component="GO:0016020 - membrane [Evidence IEA]" /GO_function="GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]" /GO_process="GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="PTS fructose transporter subunit EIIC" /protein_id="WP_001004446.1" /translation="MNELVQILKNTRQHLMTGVSHMIPFVVSGGILLAVSVMLYGKGA VPDAVADPNLKKLFDIGVAGLTLMVPFLAAYIGYSIAERSALAPCAIGAWVGNSFGAG FFGALIAGIIGGIVVHYLKKIPVHKVLRSVMPIFIIPIVGTLITAGIMMWGLGEPVGA LTNSLTQWLQGMQQGSIVMLAVIMGLMLAFDMGGPVNKVAYAFMLICVAQGVYTVVAI AAVGICIPPLGMGLATLIGRKNFSAEERETGKAALVMGCVGVTEGAIPFAAADPLRVI PSIMVGSVCGAVTAALVGAQCYAGWGGLIVLPVVEGKLGYIAAVAVGAVVTAVCVNVL KSLARKNGSSTDEKEDDLDLDFEIN" gene 79406..79726 /gene="frwB" /locus_tag="D0D43_RS13045" CDS 79406..79726 /gene="frwB" /locus_tag="D0D43_RS13045" /EC_number="2.7.1.202" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_312906.1" /GO_function="GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]" /GO_process="GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="PTS fructose-like transporter subunit IIB" /protein_id="WP_000161265.1" /translation="MTKIIAVTACPSGVAHTYMAAEALESAAKAKGWEVKVETQGSIG LENELTAEDVASADMVILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHL AQTA" gene 79777..82074 /gene="pflD" /locus_tag="D0D43_RS13050" CDS 79777..82074 /gene="pflD" /locus_tag="D0D43_RS13050" /EC_number="2.3.1.54" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418386.1" /GO_function="GO:0003824 - catalytic activity [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="formate C-acetyltransferase" /protein_id="WP_000184811.1" /translation="MTNRISRLKTALFANTREISLERALLYTASHRQTEGEPVILRRA KATAYILEHVEISIRDEELIAGNRTVKPRAGIMSPEMDPYWLLKELDQFPTRPQDRFA ISEEDKRIYREELFPYWEKRSMKDFINGQMTDEVKAATNTQIFSINQTDKGQGHIIID YPRLLNHGLGELVAQMQQHCQQQPENHFYQAALLLLEASQKHILRYAELAETMAANCT DAQRREELLTIAEISRHNAQHKPQTFWQACQLFWYMNIILQYESNASSLSLGRFDQYM LPFYQTSLTQGEDAAFLKELLESLWVKCNDIVLLRSTSSARYFAGFPTGYTALLGGLT ENGRSAVNVLSFLCLDAYQSVQLPQPNLGVRTNALIDTPFLMKTAETIRFGTGIPQIF NDEVVVPAFLNRGVSLEDARDYSVVGCVELSIPGRTYGLHDIAMFNLLKVMEICLHEN EGNAALTYEGLLEQIRAKISHYITLMVEGSNICDIGHRDWAPVPLLSSFISDCLEKGR DITDGGARYNFSGVQGIGIANLSDSLHALKGMVFEQQRLSFDELLSVLKANFATPEGE KVRARLINRFEKYGNDIDEVDNISAELLRHYCKEVEKYQNPRGGYFTPGSYTVSAHVP LGSVVGATPDGRFAGEQLADGGLSPMLGQDAQGPTAVLKSVSKLDNTLLSNGTLLNVK FTPATLEGEAGLRKLADFLRAFTQLKLQHIQFNVVNADTLREAQQRPQDYAGLVVRVA GYSAFFVELSKEIQDDIIRRTAHQL" gene 82040..82918 /gene="pflC" /locus_tag="D0D43_RS13055" CDS 82040..82918 /gene="pflC" /locus_tag="D0D43_RS13055" /EC_number="1.97.1.4" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418387.3" /GO_function="GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="[formate-C-acetyltransferase]-activating enzyme" /protein_id="WP_000204105.1" /translation="MTSSAGQRISCNVVETRRDDVARIFNIQRYSLNDGEGIRTVVFF KGCPHLCPWCANPESISGKIQTVRREAKCLHCAKCLRDADECPSGAFERIGRDISLDA LEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPAS KLLPLAKLCDEVLFDLKIMDATQARDVVKMNLPRVLENLRLLVSEGVNVIPRLPLIPG FTLSRENMQQALDVLIPLNIRQIHLLPFHQYGEPKYRLLGKTWSMKEVPAPSSADVAT MREMAERAGLQVTVGG" gene 82920..83261 /gene="frwD" /locus_tag="D0D43_RS13060" CDS 82920..83261 /gene="frwD" /locus_tag="D0D43_RS13060" /EC_number="2.7.1.-" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418388.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="PTS fructose-like transporter subunit IIB" /protein_id="WP_000323841.1" /translation="MAYLVAVTACVSGVAHTYMAAERLEKLCLLEKWGVSIETQGALG TENRLADEDIRRADVALLITDIELAGAEQFEHCRYVQCSIYAFLREPQRVMSAVRKVL SAPQQTHLILE" gene complement(83248..84099) /gene="yijO" /locus_tag="D0D43_RS13065" CDS complement(83248..84099) /gene="yijO" /locus_tag="D0D43_RS13065" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418389.1" /GO_function="GO:0043565 - sequence-specific DNA binding [Evidence IEA]" /GO_process="GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="AraC family transcriptional regulator" /protein_id="WP_000274643.1" /translation="MYHDVSYLLSRLINGPLSLRQIYFASSNGSVPDLAYQVDFPRLE IVLEGEFVDTGAGATLVPGDVLYVPAGGWNFPQWQAPATTFSVLFGKQQLGFSVVQWD GKQYQNLAKQHVARRGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQ IQTASRSQALFEAIRDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYL NHTRLEHAKTLLKGYDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLT EKPTTPE" gene complement(84314..86047) /gene="eptC" /locus_tag="D0D43_RS13070" CDS complement(84314..86047) /gene="eptC" /locus_tag="D0D43_RS13070" /inference="COORDINATES: similar to AA sequence:RefSeq:NP_418390.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phosphoethanolamine transferase CptA" /protein_id="WP_000556306.1" /translation="MHSTEVQAKPLFSWKALGWALLYFWFFSTLLQAIIYISGYSGTN GIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVLWAASLAALCYYVIYGQEFSQSVLF VMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLLWTRLRPVYIPKPWRYVVSFALL YGLILHPIAMNTFIKNKPFEKTLDNLASRMEPAAPWQFLTGYYQYRQQLNSLTKLLNE NNALPPLANFKDESGNEPRTLVLVIGESTQRGRMSLYGYPRETTPELDALHKTDPNLT VFNNVVTSRPYTIEILQQALTFANEKNPDLYLTQPSLMNMMKQAGYKTFWITNQQTMT ARNTMLTVFSRQTDKQYYMNQQRTQSAREYDTNVLKPFQEVLNDPAPKKLIIVHLLGT HIKYKYRYPENQGKFDGNTDHVPPGLNAEELESYNDYDNANLYNDHVVASLIKDFKAA NPNGFLVYFSDHGEEVYDTPPHKTQGRNEDNPTRHMYTIPFLLWTSEKWQATHPRDFS QDVDRKYSLAELIHTWSDLAGLSYDGYDPTRSVVNPQFKETTRWIGNPYKKNALIDYD TLPYGDQVGNQ" gene complement(86229..88880) /gene="ppc" /locus_tag="D0D43_RS13075" CDS complement(86229..88880) /gene="ppc" /locus_tag="D0D43_RS13075" /EC_number="4.1.1.31" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_004203687.1" /GO_function="GO:0008964 - phosphoenolpyruvate carboxylase activity [Evidence IEA]" /GO_process="GO:0015977 - carbon fixation [Evidence IEA]; GO:0006099 - tricarboxylic acid cycle [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="phosphoenolpyruvate carboxylase" /protein_id="WP_001005586.1" /translation="MNEQYSALRSNVSMLGKVLGETIKDALGEHILERVETIRKLSKS SRAGNDANRQELLTTLQNLSNDELLPVARAFSQFLNLANTAEQYHSISPKGEAASNPE VIARTLRKLKNQPELSEDTIKKAVESLSLELVLTAHPTEITRRTLIHKMVEVNACLKQ LDNKDIADYEHNQLMRRLRQLIAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWQGVP NYLRELNEQLEENLGYKLPVEFVPVRFTSWMGGDRDGNPNVTADITRHVLLLSRWKAT DLFLKDIQVLVSELSMVEATPELLALVGEEGAAEPYRYLMKNLRSRLMATQAWLEARL KGEELPKPEGLLTQNEELWEPLYACYQSLQACGMGIIANGDLLDTLRRVKCFGVPLVR IDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAE TREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETL DDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIK TCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLP EITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDVYRGYVRENKDFVPYF RSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQK VVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKEL RNLQEEDIKVVLAIANDSHLMADLPWIAESIQLRNIYTDPLNVLQAELLHRSRQAEKE GQEPDPRVEQALMVTIAGIAAGMRNTG" gene complement(89098..>89351) /locus_tag="D0D43_RS25575" CDS complement(89098..>89351) /locus_tag="D0D43_RS25575" /inference="COORDINATES: ab initio prediction:GeneMarkS-2+" /note="Derived by automated computational analysis using gene prediction method: GeneMarkS-2+." /codon_start=3 /transl_table=11 /product="hypothetical protein" /protein_id="WP_024209037.1" /translation="RPDKALAPHPALLPNSSAAIMSDAILAHLIRPTVTQTMPNCRPD KALAPHPALLPNSSAAIMSDAILAHLIRPTPLVLLGAIF" CONTIG join(QLJP01000016.1:1..89351) //
Whole sequence (abbreviated view) Selected region from: to:
All features Gene, RNA, and CDS features only
Show sequence Show reverse complement Show gap features
Your browsing activity is empty.
Activity recording is turned off.
Turn recording back on