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NCBI Reference Sequence: NZ_LWMF01000010.1
FASTA Graphics
LOCUS NZ_LWMF01000010 47747 bp DNA linear CON 17-NOV-2023 DEFINITION Staphylococcus aureus strain VB26276 NODE_19_length_47747_cov_33.4268_ID_37, whole genome shotgun sequence. ACCESSION NZ_LWMF01000010 NZ_LWMF01000000 VERSION NZ_LWMF01000010.1 DBLINK BioProject: PRJNA224116 BioSample: SAMN04868782 Assembly: GCF_001652745.1 KEYWORDS WGS; RefSeq. SOURCE Staphylococcus aureus ORGANISM Staphylococcus aureus Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus. REFERENCE 1 (bases 1 to 47747) AUTHORS Balaji,V., Naveen Kumar,D.R. and Yamuna,D. TITLE Multiple SCC mec types and hVISA JOURNAL Unpublished REFERENCE 2 (bases 1 to 47747) AUTHORS Balaji,V., Naveen Kumar,D.R. and Yamuna,D. TITLE Direct Submission JOURNAL Submitted (19-APR-2016) Clinical Microbiology, Christian Medical College, Ida Scudder Road, Vellore, Tamil Nadu 632004, India COMMENT REFSEQ INFORMATION: The reference sequence is identical to LWMF01000010.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 5.0.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 55.9x Sequencing Technology :: IonTorrent ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 11/17/2023 02:56:21 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,874 CDSs (total) :: 2,797 Genes (coding) :: 2,662 CDSs (with protein) :: 2,662 Genes (RNA) :: 77 rRNAs :: 7, 3, 3 (5S, 16S, 23S) complete rRNAs :: 2, 1, 1 (5S, 16S, 23S) partial rRNAs :: 5, 2, 2 (5S, 16S, 23S) tRNAs :: 60 ncRNAs :: 4 Pseudo Genes (total) :: 135 CDSs (without protein) :: 135 Pseudo Genes (ambiguous residues) :: 0 of 135 Pseudo Genes (frameshifted) :: 84 of 135 Pseudo Genes (incomplete) :: 51 of 135 Pseudo Genes (internal stop) :: 21 of 135 Pseudo Genes (multiple problems) :: 20 of 135 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..47747 /organism="Staphylococcus aureus" /mol_type="genomic DNA" /submitter_seqid="NODE_19_length_47747_cov_33.4268_ID_37" /strain="VB26276" /isolation_source="blood" /host="Homo sapiens" /db_xref="taxon:1280" /geo_loc_name="India: Vellore" /lat_lon="12.92467041 N 79.13662634 E" /collection_date="2015-07-29" /collected_by="CMC" gene complement(<1..1703) /gene="eap" /locus_tag="A6E17_RS02885" /old_locus_tag="A6E17_10410" /gene_synonym="map" CDS complement(<1..1703) /gene="eap" /locus_tag="A6E17_RS02885" /old_locus_tag="A6E17_10410" /gene_synonym="map" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_000669720.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="extracellular adherence protein Eap/Map" /protein_id="WP_064420252.1" /translation="MKFKSLITTTLALGVIASTGANFNTNEASAAAKPLDKSSSTLHH GHSNIQIPYTITVNGTSQNILSSLTFNKNQNISYKDIENKVKSVLYFNRGISDIDLRL SKQAEYTVHFKNGTKRVIDLKSGIYTADLINTSDIKAISVNVDTKKQPKDKAKANVQV PYTITVNGTSQNILSNLTFNKNQNISYKDLEGKVKSVLESNRGITDVDLRLSKQAKYT VNFKNGTKKVIDLKSGIYTANLINSSDIKSININVDTKKHIENKAKRNYQVPYSINLN GTSTNILSNLSFSNKPWTNYKNLTSQIKSVLKHDRGISEQDLKYAKKAYYTVYFKNGG KRILQLNSKNYTANLVHAKDVKRIEITVKTGSKAKADRYVPYTIAVNGTSTPILSKLK ISNKQLISYKYLNDKVKSVLKSERGISDLDLKFAKQAKYTVYFKNGKKQVVNLKSDIF TPNLFSAKDIKKIDIDVKTGSKAKADSYVPYTIAVNGTSTPILSKLKISNKQLISYKY LNDKVKSVLKSERGISDLDLKFAKQAKYTVYFKNGKKQVVNLKSDIFTPNLFSAKDIK K" gene 2093..2290 /locus_tag="A6E17_RS02890" /old_locus_tag="A6E17_10415" CDS 2093..2290 /locus_tag="A6E17_RS02890" /old_locus_tag="A6E17_10415" /inference="COORDINATES: ab initio prediction:GeneMarkS-2+" /note="Derived by automated computational analysis using gene prediction method: GeneMarkS-2+." /codon_start=1 /transl_table=11 /product="phospholipase" /protein_id="WP_000239610.1" /translation="MVKKTKSNSLKKVATLALANLLLVGALTDNSAKAESKKDDTDLK LVSHNVYMLSTVLYPNWRLLT" gene 2662..2841 /locus_tag="A6E17_RS02895" /old_locus_tag="A6E17_10420" CDS 2662..2841 /locus_tag="A6E17_RS02895" /old_locus_tag="A6E17_10420" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500652.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="WP_000669789.1" /translation="MKFKTTKECKSNNIFKRSQEINNRESEKGCLWGISMLILLFLLI LFGITACSSSIHFIN" gene 2865..3173 /locus_tag="A6E17_RS15665" CDS 2865..3173 /locus_tag="A6E17_RS15665" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001789576.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="WP_001792927.1" /translation="MKNHTNIINILLVIVNSLTHFLTLNTSFFNSSASDFCFIIGAIF FLIGIFVAIYGMKRATYWLNLLILFTNIFYFLHFCVLLLLKYIGFKLFIYEGCVLLFT " gene 3152..3412 /locus_tag="A6E17_RS02905" /old_locus_tag="A6E17_10430" CDS 3152..3412 /locus_tag="A6E17_RS02905" /old_locus_tag="A6E17_10430" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500654.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="WP_001791826.1" /translation="MCIVIYLIYSLIVYFICIINFFIMAAPFLMTNADYVWTPMTTVT LFILSLIIFLIFIKTKDVVHLTIFILNLLFSILYCLPILFYL" gene complement(3465..3815) /gene="scn" /locus_tag="A6E17_RS02910" /old_locus_tag="A6E17_10435" CDS complement(3465..3815) /gene="scn" /locus_tag="A6E17_RS02910" /old_locus_tag="A6E17_10435" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500655.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="complement inhibitor SCIN-A" /protein_id="WP_000702262.1" /translation="MKIRKSILAGTLAIVLASPLVTNLDKNEAQASTSLPTSNEYQNE KLANELKSLLDELNVNELATGSLNTYYKRTIKISGLKAMYALKSKDFKKMSEAKYQLQ KIYNEIDEALKSKY" gene complement(4326..>4439) /locus_tag="A6E17_RS15515" /pseudo CDS complement(4326..>4439) /locus_tag="A6E17_RS15515" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500032.1" /note="incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology." /pseudo /codon_start=1 /transl_table=11 /product="hypothetical protein" gene <4442..5251 /gene="sph" /locus_tag="A6E17_RS02915" /old_locus_tag="A6E17_10440" /pseudo CDS <4442..5251 /gene="sph" /locus_tag="A6E17_RS02915" /old_locus_tag="A6E17_10440" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_019166636.1" /GO_function="GO:0004767 - sphingomyelin phosphodiesterase activity [Evidence IEA]" /note="frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology." /pseudo /codon_start=1 /transl_table=11 /product="sphingomyelin phosphodiesterase" gene complement(5489..6505) /gene="lukG" /locus_tag="A6E17_RS02920" /old_locus_tag="A6E17_10445" CDS complement(5489..6505) /gene="lukG" /locus_tag="A6E17_RS02920" /old_locus_tag="A6E17_10445" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500725.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="bi-component leukocidin LukGH subunit G" /protein_id="WP_000595401.1" /translation="MIKQLYKNITICTLALSTTFTVLPATSYAKINSEIKAVSEKNLD GDTKMYTRTATTSDSQKNITQSLQFNFLTEPNYDKETVFIKAKGTIGSGLRILDPNGY WNSTLRWPGSYSVSIQNVDDNNNTNVTDFAPKNQDESREVKYTYGYKTGGDFSINRGG LTGNITKESNYSETISYQQPSYRTLLDQSTSHKGVGWKVEAHLINNMGHDHTRQLTND SDNRTKSEIFSLTRNGNLWAKDNFTPKNKMPVTVSEGFNPEFLAVMSHDKKDEGKSKF VVHYKRSMDEFKIDWNRHGFWGYWSGENHVDKKEEKLSALYEVDWKTHNVKFVKVLND NEKK" gene complement(6527..7579) /gene="lukH" /locus_tag="A6E17_RS02925" /old_locus_tag="A6E17_10450" CDS complement(6527..7579) /gene="lukH" /locus_tag="A6E17_RS02925" /old_locus_tag="A6E17_10450" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500726.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="bi-component leukocidin LukGH subunit H" /protein_id="WP_000791412.1" /translation="MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVD KSQQKDKRNVTNKDKNSTVPDDIGKNGKITKRTETVYDEKTNILQNLQFDFIDDPTYD KNVLLVKKQGSIHSNLKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNK ISTAKVDSTFSYSSGGKFDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHW SVIANDLKYGGEVKNRNDELLFYRNTRIATVENPELSFASKYRYPALVRSGFNPEFLT YLSNEKSNEKTQFEVTYTRNQDILKNRPGIHYAPPILEKNKDGQRLIVTYEVDWKNKT VKVVDKYSDNKSFREG" gene 8014..9237 /locus_tag="A6E17_RS02930" /old_locus_tag="A6E17_10455" CDS 8014..9237 /locus_tag="A6E17_RS02930" /old_locus_tag="A6E17_10455" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500727.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="ArgE/DapE family deacylase" /protein_id="WP_000206630.1" /translation="MTTFSEKEKIQLLADIVELQTENNNEIDVCNYLKDLFDKYDIKS EILKVNEHRANIVAEIGNGSPILALSGHMDVVDAGNQDNWTYPPFQLTEKDGKLYGRG TTDMKGGLMALVITLIELKEQNQLPQGTIRLLATAGEEKEQEGAKLLADKGYLDDVDG LIIAEPTGSGIYYAHKGSMSCKVTATGKAVHSSVPFIGDNAIDTLLEFYNQFKEKYSE LKKHDTKHELDVAPMFKSLIGKEISEEDANYASGLTAVCSIINGGKQFNSVPDEASLE FNVRPVPEYDNDFIESFFQNIINNVDSNKLSLDIPSNHRPVTSDKNSKLITTIKDVAS SYVDKDDIFVSALVGATDASSFLGDNKDNVDLAIFGPGNPLMAHQIDEYIEKDMYLKY IDIFKEASIQYLKEK" gene 9682..10989 /locus_tag="A6E17_RS02940" /old_locus_tag="A6E17_10465" CDS 9682..10989 /locus_tag="A6E17_RS02940" /old_locus_tag="A6E17_10465" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500730.1" /GO_function="GO:0015079 - potassium ion transmembrane transporter activity [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="TrkH family potassium uptake protein" /protein_id="WP_001045345.1" /translation="MNKVNKPLYFYLMLFFSTTIIGALLLYLPFTGKKPISFLDALFI ASSAFTVTGLSPVDIGSQFNILGEIVILLLIQIGGLGIVTVTLLTLVFLNRKISMKNR FLIMVTWNIDEPGGVIKLIKHLAIYSLVTELIGMICLCLSFIPKFGIGKGLFLSLFTS VSAFNNAGFALFKNNLIDYSSDPIVIITISILIIFGGIGHFVVIDFINCKKLSKLSLH SKLVLTTTSILIIIGAITFFLLEQFNTMQHMGLVEKIGNSFFQSVTTRTAGFNSIDIA SINKSTALMLMLLMFIGGAPLSAAGGIKITTFAVAFIFVLNYIRKENNVSVFNKEISD KHIKLSIVTINISFLFISIITFILSIINPNISLIKLLFEVVSAFGTVGLSMNLTTEYH GITKIIIIFVMLCGKVGLLTLLRTFIPPKSPKNYRYTKGQIYL" gene complement(11525..13141) /gene="groL" /locus_tag="A6E17_RS02945" /old_locus_tag="A6E17_10470" CDS complement(11525..13141) /gene="groL" /locus_tag="A6E17_RS02945" /old_locus_tag="A6E17_10470" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500736.1" /GO_function="GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]" /GO_process="GO:0006457 - protein folding [Evidence IEA]" /note="60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="chaperonin GroEL" /protein_id="WP_000240644.1" /translation="MVKQLKFSEDARQAMLRGVDQLANAVKVTIGPKGRNVVLDKEFT APLITNDGVTIAKEIELEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEG LKNVTSGANPVGLRQGIDKAVKVAVEALHENSQKVENKNEIAQVGAISAADEEIGRYI SEAMEKVGNDGVITIEESNGLNTELEVVEGMQFDRGYQSPYMVTDSDKMVAELERPYI LVTDKKISSFQDILPLLEQVVQSNRPILIVADEVEGDALTNIVLNRMRGTFTAVAVKA PGFGDRRKAMLEDLAILTGAQVITDDLGLDLKDASIDMLGTASKVEVTKDNTTVVDGD GDENSIDARVSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKL RIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIEAEGDIETGVNIVLKALTAPVRQ IAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEAGIVDPTKVTRSALQHAASVA AMFLTTEAVVASIPEKNNDQPNMGSMPRMM" gene complement(13217..13501) /gene="groES" /locus_tag="A6E17_RS02950" /old_locus_tag="A6E17_10475" CDS complement(13217..13501) /gene="groES" /locus_tag="A6E17_RS02950" /old_locus_tag="A6E17_10475" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500737.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="co-chaperone GroES" /protein_id="WP_000917289.1" /translation="MLKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGT GRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE" gene 13676..14419 /gene="mroQ" /locus_tag="A6E17_RS02955" /old_locus_tag="A6E17_10480" CDS 13676..14419 /gene="mroQ" /locus_tag="A6E17_RS02955" /old_locus_tag="A6E17_10480" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500738.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="CPBP family intramembrane glutamic endopeptidase MroQ" /protein_id="WP_000197635.1" /translation="MTRLWASLLTVIIYILSQFLPLLIVKKLPFVQYSGIELTKAVIY IQLVLFLIAATTIILINLKIKNPTKLELEVKEPKKYIIPWALLGFALVMIYQMVVSIV LTQIYGGQQVSPNTEKLIIIARKIPIFIFFVSIIGPLLEEYVFRKVIFGELFNAIKGN RIVAFIIATTVSSLIFALAHNDFKFIPVYFGMGVIFSLAYVWTKRLAVPIIIHMLQNG FVVIFQLLNPEALKKATEQANFIYHIFIP" gene complement(14444..15625) /locus_tag="A6E17_RS02960" /old_locus_tag="A6E17_10485" CDS complement(14444..15625) /locus_tag="A6E17_RS02960" /old_locus_tag="A6E17_10485" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500739.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="SdrH family protein" /protein_id="WP_064420254.1" /translation="MSYHWFKKMLLSTSILILSSSSLGLATHTVEAKDNLNGEKPTTN LNHNITSPSVNSEMNNNETGTPHESNQTGNEGTGSNSRDANPDSNNVKPDSNNQNPST DSKPDPNNQNPSPNPKPDPDNSKPKPDPKPDPDKPKPNPDPKPDPDKPKPNPNPKPDP NKPNPNPSPDPDQPGDSNHSGGSKNGGTWNPNASDGSNQGQWQPNGNQGNSQNPTGND FVSQRFLALANGAYKYNPYILNQINKLGKDYGEVTDEDIYNIIRKQNFSGNAYLNGLQ QQSNYFRFQYFNPLKSERYYRNLDEQVLALITGEIGSMPDLKKPEDKPDSKQRSFEPH EKDDFTVVKKQEDNKKSASTAYSKSWLAIVCSMMVVFSIMLFLFVKRNKKKNKNESQR R" gene 15822..16448 /locus_tag="A6E17_RS02965" /old_locus_tag="A6E17_10490" CDS 15822..16448 /locus_tag="A6E17_RS02965" /old_locus_tag="A6E17_10490" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500740.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="nitroreductase family protein" /protein_id="WP_000522384.1" /translation="MGLFKKDKKAMTFDNAMEERRSIYNLKDSISISDDELESMIAHA VKHVPSSFNSQSTRIVLLLNDNNNKFWDNTKAILKEVMGENRDFEPTEQKIDNFKHSY GTILFYEDQDVVSGLQEQMPNYYDNFAIWSTQTNAMHQFAIWTALATKGIGASLQHYN PLVDEMTSNEFNIPKSWKLIAQMPFGDIREAAGEKTFNPVEDRFVIKK" gene 16808..17593 /locus_tag="A6E17_RS02970" /old_locus_tag="A6E17_10495" CDS 16808..17593 /locus_tag="A6E17_RS02970" /old_locus_tag="A6E17_10495" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500741.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="carbon-nitrogen family hydrolase" /protein_id="WP_000867951.1" /translation="MKVQIYQLPIIFGDSSKNETQITQWFEKNMNAEVDVVVLPEMWN NGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVAGSVSNIRNYQIFNTAFSVNKSG QLINEYDKVHLVPMLREHEFLTAGENVAEPFQLSDGTYVTQLICYDLRFPELLRYPAR SGAKIAFYVAQWPMSRLQHWHSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVINP NGDLVGELNESADILTVDLNLNEVEQQRENIPVFKSIKLDLYK" gene complement(18193..18327) /locus_tag="A6E17_RS02975" /old_locus_tag="A6E17_10500" CDS complement(18193..18327) /locus_tag="A6E17_RS02975" /old_locus_tag="A6E17_10500" /inference="COORDINATES: protein motif:HMM:NF011337.0" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="delta-lysin family phenol-soluble modulin" /protein_id="WP_001549197.1" /translation="MSCLILRIFILIKEGVISMAQDIISTIGDLVKWIIDTVNKFTKK " gene 18563..19126 /locus_tag="A6E17_RS02980" /old_locus_tag="A6E17_10505" CDS 18563..19126 /locus_tag="A6E17_RS02980" /old_locus_tag="A6E17_10505" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001105699.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="accessory gene regulator AgrB" /protein_id="WP_001105696.1" /translation="MNYFDNKIDQFATYLQKRNNLDHIQFLQVRLGMQIIVGNFFKIL VTYSISIFLSVFLFTLVTHLSYMLIRYNAHGAHAKSSILCYIQSILTFVFVPYFLINI DINFTYLLALSIIGLISVVIYAPAATKKQPIPIKLVKRKKYLSIIMYLLVLILSLIIH PFYAQFMLLGILVESITLLPIFFPKED" gene 19129..19272 /locus_tag="A6E17_RS02985" /old_locus_tag="A6E17_10510" CDS 19129..19272 /locus_tag="A6E17_RS02985" /old_locus_tag="A6E17_10510" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001094921.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="cyclic lactone autoinducer peptide AgrD" /protein_id="WP_001094921.1" /translation="MNTLVNMFFDFIIKLAKAIGIVGGVNACSSLFDEPKVPAELTNL YDK" gene 19302..20585 /locus_tag="A6E17_RS02990" /old_locus_tag="A6E17_10515" CDS 19302..20585 /locus_tag="A6E17_RS02990" /old_locus_tag="A6E17_10515" /EC_number="2.7.13.3" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_000447882.1" /GO_function="GO:0005524 - ATP binding [Evidence IEA]; GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]" /GO_process="GO:0007165 - signal transduction [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="quorum-sensing sensor histidine kinase AgrC" /protein_id="WP_000447888.1" /translation="METINNLAMATFQLVILFTVAKFISFVKFNLRDYFIIVGIIIPT MFLYYFYGSRAVLIPTFSSIIFLFFKLKYYAIVTILVTMIIMYLSNFATVGLFLTLRK YTTDPAILLPLYILSFSSVSLLATYLVRISLKKFKKSYLSLNKTYMIIISFVLFATFA FFYIYSTNTSSNGDSLIPYALVFIGLIIFISVVILIMSLFTLKEMKYKRNQEEIETYY EYTLKIEAINNEMRKFRHDYVNILTTLSEYIREDDMIGLRAYFNKNIVPMKDNLQMNA IKLNGIENLKVREIKGLITAKILRAQEMNIPISIEIPDEVSSINLNMIDLSRSIGIIL DNAIEASTEIDDPIIRVAFIESENSVTFIVMNKCADDIPRIHELFQESFSTKGEGRGL GLSTLKEIADNADNVLLDTIIENGFFIQKVEIINN" gene 20604..21320 /locus_tag="A6E17_RS02995" /old_locus_tag="A6E17_10520" CDS 20604..21320 /locus_tag="A6E17_RS02995" /old_locus_tag="A6E17_10520" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_000688500.1" /GO_function="GO:0003677 - DNA binding [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="quorum-sensing response regulator AgrA" /protein_id="WP_000688492.1" /translation="MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVL EQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDPVGNIIFVTSHSELTYLTFVYKV AAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKER IVYFKNKEHCYASVRNVKKI" gene 21392..21501 /locus_tag="A6E17_RS03000" /old_locus_tag="A6E17_10525" /pseudo CDS 21392..21501 /locus_tag="A6E17_RS03000" /old_locus_tag="A6E17_10525" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500747.1" /note="frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology." /pseudo /codon_start=1 /transl_table=11 /product="hypothetical protein" gene complement(21689..22648) /locus_tag="A6E17_RS03005" /old_locus_tag="A6E17_10530" CDS complement(21689..22648) /locus_tag="A6E17_RS03005" /old_locus_tag="A6E17_10530" /EC_number="2.7.1.-" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500748.1" /GO_function="GO:0016301 - kinase activity [Evidence IEA]" /GO_process="GO:0005975 - carbohydrate metabolic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="carbohydrate kinase family protein" /protein_id="WP_001253308.1" /translation="MRRLFSIGEALIDFIPNVTNAKLKDVQTFTKQIGGAPCNVACTV QKLGQQAYMITQLGNDAFGDSIIETISSIGVDVSKVYRTNEANTALAFVSLTEAGERD FSFYRKPSADMLFEPSFVNDIDVNENDVVHFCSVDLVDSPMRDAHYQLITKTLNANGT VVFDPNVRLPLWDNAEDLRQTIHTFLPLAHIVKVSDEELEFITGIHDENEAIQSLFTG NVTVVIYTKGADGAAVYLKNGINHYHSGYKVKPVDTTGAGDAFIGAVISRILATDVLN LTQLFENEGEEILAFSNRVAAIVTTKYGAINSLPTLQEVEQAF" gene complement(22645..24129) /locus_tag="A6E17_RS03010" /old_locus_tag="A6E17_10535" CDS complement(22645..24129) /locus_tag="A6E17_RS03010" /old_locus_tag="A6E17_10535" /EC_number="3.2.1.26" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500749.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="sucrose-6-phosphate hydrolase" /protein_id="WP_000141432.1" /translation="MTEWTREERYQRIEDVDTEYFKTLKQQVDQSKFRQQFHIQPETG LLNDPNGLIFYKGKYYVSHQWFPLGAVHGLKYWYNYTSDDLINFKPEGPILNPDTKYD SHGVYSGSAFEYNGHLYYMYTGNHRDNHWQRHASQMIARLKEDGSVEKFPKPVISQQP EGYTSHFRDPKVFKYGEKYYAIIGAQNNDQQGRLLLYNTEDIINWHYLGEINTELDDF GYMWECPDYFNLDNQDVILICPQGIEPKGNQFKNIYQSGYILGKFDIEKLTYEHENFV ELDNGFDFYAPQTFLDEKGRRVLIGWMGLPEIEYPTDNEGWAHCLTIPRVLNVENGQL KQRPYPALEKLRHNKETALGYANKFTRKLHPYEGKQYELIIDILDNDATEVYFELRTS KTSSTLIAYNKRENKITLDRSDSGLLPTNVEGTTRSTILDTPLKQLQIFVDTSSIEIF CNDGERVLTSRIFPTEDALGIKTSTESGQVYLQFTKYDLKDEHK" gene complement(24278..25228) /locus_tag="A6E17_RS03015" /old_locus_tag="A6E17_10540" CDS complement(24278..25228) /locus_tag="A6E17_RS03015" /old_locus_tag="A6E17_10540" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500750.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="LacI family DNA-binding transcriptional regulator" /protein_id="WP_000790331.1" /translation="MKNISDIAKLAGVSKSTVSRFLNNGSVSKKTSEKLTRIIAEHDY QPNQFAQSLRARQTHLIGAIIPRMNSYAVDETIKGLAKQCQKYESQLILNYTGLNIEA EIQALETLARSKVDGIVLMATDITERHIEVINKMNVPIVIVGQQHEQLHSIVHDDYKA GQIIGEWIGQQGYQQVEVFSVSEKDIAVGIHRKRGLLDQLAKYQIKPNIHETNFTYVE AQKDVANVLENVEQVDAVVGATDTIALAAYKYYSDKNDVMKPHQIYGFGGDPMTQLVS PSIKTIHYNYFEAGQCAMEEIQQMLKKQDMPYSVTVDVNI" gene complement(25411..26661) /locus_tag="A6E17_RS03020" /old_locus_tag="A6E17_10545" CDS complement(25411..26661) /locus_tag="A6E17_RS03020" /old_locus_tag="A6E17_10545" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500751.1" /GO_component="GO:0016020 - membrane [Evidence IEA]" /GO_function="GO:0008519 - ammonium transmembrane transporter activity [Evidence IEA]" /GO_process="GO:0072488 - ammonium transmembrane transport [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="ammonium transporter" /protein_id="WP_001052270.1" /translation="MNLNDTIFMFLCTLLVWLMTPGLSLFYGGLVQSKNALNTVMQSM AAIVLVTFVWITVGFTISFGNGNLWFGNWEYTFLNHVGFATQEDISPHIPFALFMLFQ MMFCTIAISILSGSIAEKMKFIPYLLFVVIWTALVYSPVAHWVWGGGWINKLGVLDFA GGTVVHITSGVSGLVLAIMIGKGNKHSESTPHNLIITLIGGIFVWIGWYGFNVGSAFT FDNIAMLAFTNTVISASAGAIGWLILEYIFKKTTSLLGLLLGALAGLVVITPAAGYVT YLSATIMALIGGICCYIVINYIKVKLKYHDALDAFGIHGVGGIIGAVLTAVFQSKKAN PDIENGFIYTGDIHIILVQILCVTAVVIFSIVMTFIIAKVIKLITPLSVTEQETNIGL DKIVHGEHAYFEGELNRFNKHIRY" gene complement(26869..27093) /locus_tag="A6E17_RS03025" /old_locus_tag="A6E17_10550" CDS complement(26869..27093) /locus_tag="A6E17_RS03025" /old_locus_tag="A6E17_10550" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500752.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="sulfurtransferase TusA family protein" /protein_id="WP_000581076.1" /translation="MIHELGTVGMVCPFPLIEAQKKMATLQSGDELKIDFDCTQATEA IPNWAAENGYPITNYEQIDNASWTITIQKV" gene complement(27153..28232) /locus_tag="A6E17_RS03030" /old_locus_tag="A6E17_10555" CDS complement(27153..28232) /locus_tag="A6E17_RS03030" /old_locus_tag="A6E17_10555" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_000266877.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="YeeE/YedE family protein" /protein_id="WP_000266878.1" /translation="MWMIFSGLIVGGLLGFVMQRTRFCLTGGFRDMYVQKNNKMFYAL LIAITIQSIGLLILTATDILKIPAHSFPILGTIIGSFIFGIGIVLAGGCATGTWYRAG EGLIGSWIALVLYAVTAAITKTGILKPVMDKINQPTNVNSDMSQTTGIPFWGLVVILT IITIFLVVRTLNNKKVRVAVPKLKQRYTGIRYYLFEKRYHPFIAAIVIGLIALLAWPM SASTGRNDGLGITTPSANLVHFLITGETKFIDWGVFLVLGIFIGSYIAARGSREFKWR LPDKITIRNSAIGGICMGFGASVAGGCSIGNGLVETATMTWQGWIALASMIVGVWTMS HFIFVRPMKKVQQQSAKVKQQTQIV" gene complement(28536..29171) /locus_tag="A6E17_RS03035" /old_locus_tag="A6E17_10560" CDS complement(28536..29171) /locus_tag="A6E17_RS03035" /old_locus_tag="A6E17_10560" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500754.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="redox-sensing transcriptional repressor Rex" /protein_id="WP_001283612.1" /translation="MSDQVKIPRATLKRLPLYYRFVSSLKSKGIDRVNSKAISDALQI DSATIRRDFSYFGELGKKGYGYNIDSLLDFFKSELSESDMIKIAIVGVGNLGKALLTY NFSIHDDMTITEAFDVKEDVIGQKIGNVIVKDNDELITTLKKEEIDVVILTTPERVAQ KVADELVQAGVKGILNFTPGRINTPSDVQVHQIDLGIELQSLLFFMKNYSE" gene 29424..31352 /gene="abc-f" /locus_tag="A6E17_RS03040" /old_locus_tag="A6E17_10565" CDS 29424..31352 /gene="abc-f" /locus_tag="A6E17_RS03040" /old_locus_tag="A6E17_10565" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500755.1" /GO_function="GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="ABC-F family ATP-binding cassette domain-containing protein" /protein_id="WP_000602069.1" /translation="MILLQLNHISKSFDGEDIFTDVDFEVKTGERIGIVGRNGAGKST LMKIIAGVENYDSGNVSKIKNLKLGYLTQQMTLNSNATVFEEMSKPFEHIKRMESLIK EETDWLSKHANDYDSDTYKTHMSRYESLSNQFEQLEGYQYESKIKTVLYGLNFSEEDF NKPINDFSGGQKTRLSLAQMLLNEPDLLLLDEPTNHLDLETTKWLEDYLRYFKGAIVI ISHDRYFLDKIVTQIYDVALGDVKRYVGNYEEFIQQRDLYYQKRMQEYESQQAEIKRL ETFVEKNITRASTSGMAKSRRKILEKMERIDKPMLDAKSANIQFGFDRNTGNDVMHVK NLEIGYQTAITKPISIEVSKGDHIAIIGPNGIGKSTLIKTIANQQKALNGDITFGANL QIGYYDQKQAEFKSSKTILDYVWDQYPLMNEKDIRAVLGRFLFVQDDVKKIINDLSGG EKARLQLALLMLQRDNVLILDEPTNHLDIDSKEMLEQALQHFEGTILFVSHDRYFINQ LANKVFDLTIDGGKMYLGDYQYYIEKVEEAEALKAHQEEQSVNVQAHKKSMEQSSYHN QKEQRREQRKLERQISECENEIETLETTILQIDEQLTQPEVYNNPQKANELAIQKQDS EQKLEHAMSKWEELQQKL" gene complement(31497..31626) /locus_tag="A6E17_RS03045" /old_locus_tag="A6E17_10570" /pseudo CDS complement(31497..31626) /locus_tag="A6E17_RS03045" /old_locus_tag="A6E17_10570" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500756.1" /note="frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology." /pseudo /codon_start=1 /transl_table=11 /product="hypothetical protein" gene 31715..33325 /locus_tag="A6E17_RS03050" /old_locus_tag="A6E17_10575" CDS 31715..33325 /locus_tag="A6E17_RS03050" /old_locus_tag="A6E17_10575" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001666855.1" /GO_function="GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]" /GO_process="GO:0006298 - mismatch repair [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="MutS family DNA mismatch repair protein" /protein_id="WP_000106310.1" /translation="MSTNQTFLIFVIAIIILTSVIGIVGRYMSRQRLLKSMETLWQTI SPLEAFIRPNSHFDYEYKLYKEKFESHSLVDDKTWSDLNMNAIFHKMNYNLTAIGEMK LYACLRGMLSITNKSLLSLFNDNAEFRKNVTYHLALIGKTVYPTFPDQITPVKRQNIL FLCPFLPVISFAVIFINSQVGILLFLMSCLFNIILSATLKRTYEDDLKSIFYASNVLK QGYTISKIKHAPQPEVNFKQFRTARHLTSVLAEVNDEDIGAMVIKLVKLIFMLDYVLF HSIQKSYTTHMNELKNCFDYIAELDNHYALAMYRRTLECYTEPQIDDSNDGIVFSELT HPLIADAVANDFSLSQNILLTGSNASGKSTFMKSIAINIILASAIQTVTASKFVYQPG IVFTSMANADDVLSGDSYFMAELKSIKRIVEIPDNQKIYCFIDEIFKGTNTTERIAAS ESVLSFLHEKSNFRVIAATHDIELAELLKQRYENYHFNEVIENNNIHFDYKIKPGKAN TRNAIELLKITSFPAKIYERAKDNVSNG" gene complement(33640..34665) /gene="tsaD" /locus_tag="A6E17_RS03055" /old_locus_tag="A6E17_10580" CDS complement(33640..34665) /gene="tsaD" /locus_tag="A6E17_RS03055" /old_locus_tag="A6E17_10580" /EC_number="2.3.1.234" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500758.1" /GO_process="GO:0006400 - tRNA modification [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD" /protein_id="WP_000159038.1" /translation="MTKDILILAVETSCDETSVSVIKNGRDILSNTVLSQIESHKRFG GVVPEVASRHHVEGITTTINEALVDADVSIEDIDAIAVTEGPGLIGALLIGVNAAKAL AFAYDKPLIPVHHIAGHIYANHIEEPLTFPLIALIVSGGHTELVYMKDHLSFEVIGET RDDAVGEAYDKVARTIGLNYPGGPQVDRLAAEGEDTYSFPRVWLDKDSYDFSFSGLKS AVINQLHNQRQKNIPIIEANVATSFQNSVVEVLTFKAIQACKEYGVQRLIVAGGVASN KGLRQSLADQCKVNDIQLTIPSPKLCTDNAAMIGVAGHYLYQQGRFADLALNGHSNID LEEYSAE" gene complement(34658..35122) /gene="rimI" /locus_tag="A6E17_RS03060" /old_locus_tag="A6E17_10585" CDS complement(34658..35122) /gene="rimI" /locus_tag="A6E17_RS03060" /old_locus_tag="A6E17_10585" /EC_number="2.3.1.266" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_001611465.1" /GO_function="GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]" /GO_process="GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="ribosomal protein S18-alanine N-acetyltransferase" /protein_id="WP_000372755.1" /translation="MDQQSKEQLNIREMTKEDVPQVFDIERRSFNDSSWTIDAFYHEI EQNNFAKYFVLEFEQQIIGYLGLWIVIDQAQITTVAIDDNYRGYGLGQMLLKYGINYA SHTCDVMSLEVRVNNKVAQHVYENLGFQYGGKRKNYYGEGEDAMVMWVNLND" gene complement(35095..35757) /gene="tsaB" /locus_tag="A6E17_RS03065" /old_locus_tag="A6E17_10590" CDS complement(35095..35757) /gene="tsaB" /locus_tag="A6E17_RS03065" /old_locus_tag="A6E17_10590" /EC_number="2.3.1.234" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500760.1" /GO_function="GO:0003725 - double-stranded RNA binding [Evidence IEA]" /GO_process="GO:0006400 - tRNA modification [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB" /protein_id="WP_001837626.1" /translation="MNSLLIDTSNQPLSVALMQNDEVLAEITTDSKQNHSVQLMPAIS QLFEQSKIAKQQLDAIIVAEGPGSYTGLRIGVTVAKTLAYALDVKLYGVSSLKALAAT IDHTDKLLVPVFDARRQAVYTGIFQWQNGQLVTILEDQYMSIEALRAFLEDLNQPFIY IGKDTIKLQDELQGEVIAQLPNASVMYQLIDKPSDVHTFTPKYHKLAEAERDWINSQK NN" gene complement(35738..36199) /gene="tsaE" /locus_tag="A6E17_RS03070" /old_locus_tag="A6E17_10595" CDS complement(35738..36199) /gene="tsaE" /locus_tag="A6E17_RS03070" /old_locus_tag="A6E17_10595" /inference="COORDINATES: similar to AA sequence:RefSeq:WP_000590797.1" /GO_component="GO:0005737 - cytoplasm [Evidence IEA]" /GO_function="GO:0016887 - ATP hydrolysis activity [Evidence IEA]" /GO_process="GO:0006400 - tRNA modification [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE" /protein_id="WP_000590800.1" /translation="MIKINNLDEMNQFAIFLVEQLKSGDLILLNGDLGSGKTTLTQFI GKALGVRRTINSPTFNIIKSYRGKNLKLHHMDCYRLEDSDEDLGFDEFFEDQAITVIE WSLFIKDLLPATHLSINISTISENTRQIELFAQGEHYEQIKEAIIHEFAAH" gene 36238..36393 /locus_tag="A6E17_RS03075" /old_locus_tag="A6E17_10600" CDS 36238..36393 /locus_tag="A6E17_RS03075" /old_locus_tag="A6E17_10600" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500762.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="WP_001789600.1" /translation="MIIHCSIVSNFIFNLYIVTNFNLNFLSLKQIIYSKLIVRKFKIF VDILKQI" gene 36711..38399 /gene="ilvD" /locus_tag="A6E17_RS03080" /old_locus_tag="A6E17_10605" CDS 36711..38399 /gene="ilvD" /locus_tag="A6E17_RS03080" /old_locus_tag="A6E17_10605" /EC_number="4.2.1.9" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500763.1" /GO_function="GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]" /GO_process="GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="dihydroxy-acid dehydratase" /protein_id="WP_064420255.1" /translation="MRSDMIKKGDHQAPARSLLHATGALKSPTDMNKPFVAICNSYID IVPGHVHLRELADIAKEAIREAGAIPFEFNTIGVDDGIAMGHIGMRYSLPSREIIADA AETVINAHWFDDVFYIPNCDKITPGMILAAMRTNVPAIFCSGGPMKAGLSAHGKALTL SSMFEAVGAFKEGSISKEEFLDMEQNACPTCGSCAGMFTANSMNCLMEVLGLALPYNG TALAVSDQRREMIRQAAFKLVENIKNDLKPRDIVTREAIDDAFALDMAMGGSTNTVLH TLAIANETGIDYDLERINAIAKRTPYLSKIAPSSSYSMHDVHEAGGVPAIINELMKKD GTLHPDRITVTGKTLRENNEGKEIKNFDVIHSLDAPYDAQGGLSILFGNIAPKGAVIK VGGVDPSIKTFTGKAICFNSHDEAVEAIDNRTVRAGHVVVIRYEGPKGGPGMPEMLAP TSSIVGRGLGKDVALITDGRFSGATRGIAVGHISPEAASGGPIALIEDGDEITIDLTN RTLNVNQPEDVLARRRESLTPFKAKVKTGYLARYTALVTSANTGGVMQVPENLI" gene 38427..40196 /gene="ilvB" /locus_tag="A6E17_RS03085" /old_locus_tag="A6E17_10610" CDS 38427..40196 /gene="ilvB" /locus_tag="A6E17_RS03085" /old_locus_tag="A6E17_10610" /EC_number="2.2.1.6" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500764.1" /GO_component="GO:0005948 - acetolactate synthase complex [Evidence IEA]" /GO_function="GO:0003984 - acetolactate synthase activity [Evidence IEA]" /GO_process="GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="biosynthetic-type acetolactate synthase large subunit" /protein_id="WP_000047821.1" /translation="MSKTQHEVNQNIDPLKMAESLEPEQLNEKTLNDMRSGSEVLVEA LLKENVDYLFGYPGGAVLPLYDTFYDGKIKHILARHEQGAVHAAEGYARVSGKTGVVV VTSGPGATNVMTGITDAHCDSLPLVVFTGQVATPGIGKDAFQEADILSMTSPITKQNY QVKRVEDIPKIVHEAFHVANSGRKGPVVIDFPKDMGVLATNVDLCDEINIPGYEVVTE PENKDIDTFISLLKEAKKPVVLAGAGINQSKSNQLLTQFVNKHQIPTVTTLLGLGAVP YEDTLFLGMGGMHGSYASNMALTECDLLINLGSRFDDRLASKPDAFAPNAKIVHVDID PSEINKVIHVDLGIIADCKRFLECLNDKNVETIEHSDWVKHCQNNKQKHPFKLGEEDQ VFCKPQQTIEYIGKITNGEAIVTTDVGQHQMWAAQFYPFKNHGQWVTSGGLGTMGFGI PSSIGAKLANPDKTVVCFVGDGGFQMTNQEMALLPEYGLDVKIVLINNGTLGMVKQWQ DKFFNQRFSHSVFNGQPDFMKMAEAYGVKGFLIDKPEQLEEQLDAAFAYQGPVLIEVR ISPTEAVTPMVPSGKSNHEMEGL" gene 40196..40450 /locus_tag="A6E17_RS03090" /old_locus_tag="A6E17_10615" CDS 40196..40450 /locus_tag="A6E17_RS03090" /old_locus_tag="A6E17_10615" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500765.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="ACT domain-containing protein" /protein_id="WP_000196911.1" /translation="MTRILKLQVADQVSTLNRITSAFVRLQYNIDTLHVTHSEQPGIS NMEIQVDIQDDTSLHILIKKLKQQINVLTVECYDLVDNEA" gene 40587..41591 /gene="ilvC" /locus_tag="A6E17_RS03095" /old_locus_tag="A6E17_10620" CDS 40587..41591 /gene="ilvC" /locus_tag="A6E17_RS03095" /old_locus_tag="A6E17_10620" /EC_number="1.1.1.86" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500766.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="ketol-acid reductoisomerase" /protein_id="WP_000214552.1" /translation="MTTVYYDQDVKTDALQGKKIAVVGYGSQGHAHAQNLKDNGYDVV IGIRPGRSFDKAKEDGFDVFPVAEAVKQADVIMVLLPDEIQGDVYKNEIEPNLEKHNA LAFAHGFNIHFGVIQPPADVDVFLVAPKGPGHLVRRTFVEGSAVPSLFGIQQDASGQA RNIALSYAKGIGATRAGVIETTFKEETETDLFGEQAVLCGGVSKLIQSGFETLVEAGY QPELAYFEVLHEMKLIVDLMYEGGMENVRYSISNTAEFGDYVSGPRVITPDVKENMKA VLTDIQNGNFSNRFIEDNKNGFKEFYKLREEQHGHQIEKVGRELREMMPFIKSKSIEK " gene 41621..43150 /locus_tag="A6E17_RS03100" /old_locus_tag="A6E17_10625" CDS 41621..43150 /locus_tag="A6E17_RS03100" /old_locus_tag="A6E17_10625" /EC_number="2.3.3.13" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500767.1" /GO_function="GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]" /GO_process="GO:0009098 - leucine biosynthetic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="2-isopropylmalate synthase" /protein_id="WP_000094576.1" /translation="MSSHIQIFDTTLRDGEQTPGVNFTFDERLRIALQLEKWGVDVIE AGFPASSTGSFKSVQAIAQTLTTTAVCGLARCKKSDIDAVYEATKDAAKPVVHVFIAT SPIHLEHKLKMSQEDVLASIKEHVTYAKQLFDVVQFSPEDATRTELPFLVKCVQTAVD AGATVINIPDTVGYSYHDEYAHIFKTLTESVTSSNEIIYSAHCHDDLGMAVSNSLAAI EGGARRIEGTVNGIGERAGNAALEEVALALYVRNDHYGAQTALNLEETKKTSDLISRY AGIRVPRNKAIVGQNAFSHESGIHQDGVLKHRETYEIMTPQLVGVSTTELPLGKLSGK HAFSEKLKALGYDIDKEAQIDLFKQFKAIADKKKSVSDRDIHAIIQGSEHEHQALYKL ETLQLQYVSSGLQSAVVVVKDKEGHIYQDSSIGTGSIVAIYNAVDRIFQKETELIDYR INSVTEGTDAQAEVHVNLLIEGKTVNGFGIDHDILQASCKAYVEAHAKFAAENVEKVG N" gene 43153..44199 /gene="leuB" /locus_tag="A6E17_RS03105" /old_locus_tag="A6E17_10630" CDS 43153..44199 /gene="leuB" /locus_tag="A6E17_RS03105" /old_locus_tag="A6E17_10630" /EC_number="1.1.1.85" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500768.1" /GO_function="GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]" /GO_process="GO:0009098 - leucine biosynthetic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydrogenase" /protein_id="WP_000221948.1" /translation="MTYNIVALPGDGIGPEILNGSLSLLEIISNKYNFNYQIEHHEFG GASIDTFGEPLTEKTLNACKRADAILLGAIGGPKWTDPNNRPEQGLLKLRKSLNLFAN IRPTTVVKGASSLSPLKEERVEGTDLVIVRELTSGIYFGEPRHFNNHEALDSLTYTRE EIERIVHVAFKLAASRRGKLTSVDKENVLASSKLWRKVVNEVSQLYPEVTVNHLLVDA CSMHLITNPKQFDVIVCENLFGDILSDEASVIPGSLGLSPSASFSNDGPRLYEPIHGS APDIAGKNVANPFGMILSLAMCLRESLNQQDAADELEQHIYNMIEHGQTTADLGGKLN TTDIFEILSQKLNH" gene 44213..45583 /gene="leuC" /locus_tag="A6E17_RS03110" /old_locus_tag="A6E17_10635" CDS 44213..45583 /gene="leuC" /locus_tag="A6E17_RS03110" /old_locus_tag="A6E17_10635" /EC_number="4.2.1.33" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500769.1" /GO_component="GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]" /GO_function="GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]" /GO_process="GO:0009098 - leucine biosynthetic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydratase large subunit" /protein_id="WP_000531823.1" /translation="MGQTLFDKVWNRHVLYGKLGEPQLLYIDLHLIHEVTSPQAFEGL RLQNRKLRRPDLTFATLDHNVPTIDIFNIKDEIANKQITTLQKNAIDFGVHIFDMGSD EQGIVHMVGPETGLTQPGKTIVCGDSHTATHGAFGAIAFGIGTSEVEHVFATQTLWQT KPKNLKIDINGTLPTGVYAKDIILHLIKTYGVDFGTGYALEFTGETIKNLSMDGRMTI CNMAIEGGAKYGIIQPDDITFEYVKGRPFADNFAKSVDKWRELYSDDDAIFDRVIELD VSTLEPQVTWGTNPEMGVNFSEPFPEINDINDQRAYDYMGLEPGQKAEDIDLGYVFLG SCTNARLSDLIEASHIVKGNKVHPNITAIVVPGSRTVKKEAEKLGLDTIFKNAGFEWR EPGCSMCLGMNPDQVPEGVHCASTSNRNFEGRQGKGARTHLVSPAMAAAAAIHGKFVD VRKVVV" gene 45584..46156 /gene="leuD" /locus_tag="A6E17_RS03115" /old_locus_tag="A6E17_10640" CDS 45584..46156 /gene="leuD" /locus_tag="A6E17_RS03115" /old_locus_tag="A6E17_10640" /EC_number="4.2.1.33" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500770.1" /GO_component="GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]" /GO_function="GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]" /GO_process="GO:0009098 - leucine biosynthetic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="3-isopropylmalate dehydratase small subunit" /protein_id="WP_000718948.1" /translation="MAAIKPITTYKGKIVPLFNDNIDTDQIIPKVHLKRISKSGFGPF AFDEWRYLPDGSDNPDFNPNKPQYKGASILITGDNFGCGSSREHAAWALKDYGFHIII AGSFSDIFYMNCTKNAMLPIVLEKNAREHLAKYVEIEVDLPNQTVSSPDKRFHFEIDE TWKNKLVNGLDDIAITLQYESLIEKYEKSL" gene 46171..47439 /gene="ilvA" /locus_tag="A6E17_RS03120" /old_locus_tag="A6E17_10645" CDS 46171..47439 /gene="ilvA" /locus_tag="A6E17_RS03120" /old_locus_tag="A6E17_10645" /EC_number="4.3.1.19" /inference="COORDINATES: similar to AA sequence:RefSeq:YP_500771.1" /GO_function="GO:0004794 - L-threonine ammonia-lyase activity [Evidence IEA]" /GO_process="GO:0006520 - amino acid metabolic process [Evidence IEA]" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /codon_start=1 /transl_table=11 /product="threonine ammonia-lyase IlvA" /protein_id="WP_000216855.1" /translation="MTVKTTVSTKDIDEAFLRLKDIVKETPLQLDHYLSQKYDCKVYL KREDLQWVRSFKLRGAYNAISVLSDEAKSKGITCASAGNHAQGVAYTAKKLNLNAVIF MPVTTPLQKVNQVKFFGNSNVEVVLTGDTFDHCLAEALTYTSEHQMNFIDPFNNVHTI SGQGTLAKEMLEQSKTDNVNFDYLFAAIGGGGLISGISTYFKTYSPTTKIIGVEPSGA SSMYESVVVNNQVVTLPNIDKFVDGASVARVGDITFEIAKENVDDYVQVDEGAVCSTI LDMYSKQAIVAEPAGALSVSALENYKDHIKGKTVVCVISGGNNDINRMKEIEERSLLY EEMKHYFILNFPQRPGALREFVNDVLGPQDDITKFEYLKKSSQNTGTVIIGIQLKDHD DLIQLKQRVNHFDPSNIYINENKMLYSLLI" gene complement(47650..>47747) /gene="rrf" /locus_tag="A6E17_RS03125" /old_locus_tag="A6E17_10650" rRNA complement(47650..>47747) /gene="rrf" /locus_tag="A6E17_RS03125" /old_locus_tag="A6E17_10650" /product="5S ribosomal RNA" /inference="COORDINATES: nucleotide motif:Rfam:14.4:RF00001" /inference="COORDINATES: profile:INFERNAL:1.1.4" /note="Derived by automated computational analysis using gene prediction method: cmsearch." /db_xref="RFAM:RF00001" CONTIG join(LWMF01000010.1:1..47747) //
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