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Staphylococcus aureus VET0471R adZIW-supercont1.20, whole genome shotgun sequence

NCBI Reference Sequence: NZ_JIKL01000020.1

FASTA Graphics 

LOCUS       NZ_JIKL01000020        39058 bp    DNA     linear   CON 06-NOV-2023
DEFINITION  Staphylococcus aureus VET0471R adZIW-supercont1.20, whole genome
            shotgun sequence.
ACCESSION   NZ_JIKL01000020 NZ_JIKL01000000
VERSION     NZ_JIKL01000020.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02404265
            Assembly: GCF_000683315.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus VET0471R
  ORGANISM  Staphylococcus aureus VET0471R
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1  (bases 1 to 39058)
  AUTHORS   Feldgarden,M., Price,L., Nordstrom,L., Larsen,J.,
            Contente-Cuomo,T., Andersen,P., Young,S., Zeng,Q., Gargeya,S.,
            Abouelleil,A., Alvarado,L., Chapman,S.B., Gainer-Dewar,J.,
            Goldberg,J., Griggs,A., Gujja,S., Hansen,M., Howarth,C.,
            Imamovic,A., Larimer,J., Murphy,C., Naylor,J., Pearson,M.,
            Poon,T.W., Priest,M., Roberts,A., Saif,S., Shea,T., Sykes,S.,
            Wortman,J., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genomics Platform, The Broad Institute Genome
            Sequencing Center for Infectious Disease
  TITLE     The Genome Sequence of Staphylococcus aureus VET0471R
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 39058)
  AUTHORS   Feldgarden,M., Price,L., Nordstrom,L., Larsen,J.,
            Contente-Cuomo,T., Andersen,P., Young,S., Zeng,Q., Gargeya,S.,
            Abouelleil,A., Alvarado,L., Chapman,S.B., Gainer-Dewar,J.,
            Goldberg,J., Griggs,A., Gujja,S., Hansen,M., Howarth,C.,
            Imamovic,A., Larimer,J., Murphy,C., Naylor,J., Pearson,M.,
            Poon,T.W., Priest,M., Roberts,A., Saif,S., Shea,T., Sykes,S.,
            Wortman,J., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genomics Platform, The Broad Institute Genome
            Sequencing Center for Infectious Disease
  TITLE     Direct Submission
  JOURNAL   Submitted (07-APR-2014) Broad Institute of MIT and Harvard, 7
            Cambridge Center, Cambridge, MA 02142, USA
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JIKL01000020.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: allpaths v. R48559
            Assembly Name         :: Stap_aure_VET0471R_V1
            Genome Coverage       :: 86.0x
            Sequencing Technology :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 11/06/2023 02:31:25
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,808
            CDSs (total)                      :: 2,736
            Genes (coding)                    :: 2,634
            CDSs (with protein)               :: 2,634
            Genes (RNA)                       :: 72
            rRNAs                             :: 4, 4, 4 (5S, 16S, 23S)
            complete rRNAs                    :: 4, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 3, 3 (16S, 23S)
            tRNAs                             :: 56
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 102
            CDSs (without protein)            :: 102
            Pseudo Genes (ambiguous residues) :: 0 of 102
            Pseudo Genes (frameshifted)       :: 42 of 102
            Pseudo Genes (incomplete)         :: 54 of 102
            Pseudo Genes (internal stop)      :: 28 of 102
            Pseudo Genes (multiple problems)  :: 18 of 102
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39058
                     /organism="Staphylococcus aureus VET0471R"
                     /mol_type="genomic DNA"
                     /submitter_seqid="adZIW-supercont1.20"
                     /strain="VET0471R"
                     /host="Homo sapiens"
                     /db_xref="taxon:1422682"
                     /geo_loc_name="Netherlands"
                     /collection_date="2009-10-11"
     gene            1676..2140
                     /locus_tag="W681_RS15665"
                     /old_locus_tag="W681_02355"
     CDS             1676..2140
                     /locus_tag="W681_RS15665"
                     /old_locus_tag="W681_02355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000825946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_000825946.1"
                     /translation="MKRLLGLLLASTLVLVACGNDENKEESKKEVKSKEKKIEKEKEN
                     KSKKDKEKEVATQQQPDNQTVEQPQSQEQSVQQPQQQLPQNSVPQQNAQVQQNKKQKV
                     DLNNMPPTDFSTEGMSEQAQKQIEELTMQKDYHGLSQREYNDRVSEIINNDN"
     gene            <2445..2655
                     /locus_tag="W681_RS18440"
                     /pseudo
     CDS             <2445..2655
                     /locus_tag="W681_RS18440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001561168.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            <2882..2989
                     /locus_tag="W681_RS18445"
                     /pseudo
     CDS             <2882..2989
                     /locus_tag="W681_RS18445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002456358.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
     gene            complement(3226..3314)
                     /locus_tag="W681_RS15670"
                     /old_locus_tag="W681_02356"
     tRNA            complement(3226..3314)
                     /locus_tag="W681_RS15670"
                     /old_locus_tag="W681_02356"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3277..3279),aa:Ser,seq:gga)
     gene            complement(3369..3440)
                     /locus_tag="W681_RS15675"
                     /old_locus_tag="W681_02357"
     tRNA            complement(3369..3440)
                     /locus_tag="W681_RS15675"
                     /old_locus_tag="W681_02357"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3405..3407),aa:Glu,seq:ttc)
     gene            complement(3442..3516)
                     /locus_tag="W681_RS15680"
                     /old_locus_tag="W681_02358"
     tRNA            complement(3442..3516)
                     /locus_tag="W681_RS15680"
                     /old_locus_tag="W681_02358"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3482..3484),aa:Asn,seq:gtt)
     gene            complement(3531..3604)
                     /locus_tag="W681_RS15685"
                     /old_locus_tag="W681_02359"
     tRNA            complement(3531..3604)
                     /locus_tag="W681_RS15685"
                     /old_locus_tag="W681_02359"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3570..3572),aa:Gly,seq:tcc)
     gene            complement(3620..3695)
                     /locus_tag="W681_RS15690"
                     /old_locus_tag="W681_02360"
     tRNA            complement(3620..3695)
                     /locus_tag="W681_RS15690"
                     /old_locus_tag="W681_02360"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3660..3662),aa:His,seq:gtg)
     gene            complement(3709..3781)
                     /locus_tag="W681_RS15695"
                     /old_locus_tag="W681_02361"
     tRNA            complement(3709..3781)
                     /locus_tag="W681_RS15695"
                     /old_locus_tag="W681_02361"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3746..3748),aa:Phe,seq:gaa)
     gene            complement(3798..3873)
                     /locus_tag="W681_RS15700"
                     /old_locus_tag="W681_02362"
     tRNA            complement(3798..3873)
                     /locus_tag="W681_RS15700"
                     /old_locus_tag="W681_02362"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3838..3840),aa:Asp,seq:gtc)
     gene            complement(3895..3968)
                     /locus_tag="W681_RS15705"
                     /old_locus_tag="W681_02363"
     tRNA            complement(3895..3968)
                     /locus_tag="W681_RS15705"
                     /old_locus_tag="W681_02363"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3932..3934),aa:Met,seq:cat)
     gene            complement(4466..5020)
                     /locus_tag="W681_RS15710"
                     /old_locus_tag="W681_02364"
     CDS             complement(4466..5020)
                     /locus_tag="W681_RS15710"
                     /old_locus_tag="W681_02364"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RBBP9/YdeN family alpha/beta hydrolase"
                     /protein_id="WP_000132890.1"
                     /translation="MTDVIIVHSMHGNSRNHWYQWLEHNLTLEGYDVTLFNFESPEAK
                     TVDQWIEAMTKQINVRKKDTYFVTHGLGSITALKYIEMIDQPIEGFFSIAGFKEDAEN
                     IDLDIDLSNVTIDYDNIKKKVDNFYGLSSKNDKYVSYKETQRLMNALEGNLRIVEDGG
                     HFLEEDGFETFTALQDRMQDYMTR"
     gene            complement(5340..6740)
                     /gene="hemY"
                     /locus_tag="W681_RS15715"
                     /old_locus_tag="W681_02365"
     CDS             complement(5340..6740)
                     /gene="hemY"
                     /locus_tag="W681_RS15715"
                     /old_locus_tag="W681_02365"
                     /EC_number="1.3.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500459.1"
                     /GO_function="GO:0004729 - oxygen-dependent
                     protoporphyrinogen oxidase activity [Evidence IEA]"
                     /GO_process="GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase"
                     /protein_id="WP_000167534.1"
                     /translation="MTKSVAIIGAGITGLSSAYFLKQQDPNIDVTIFEASNRPGGKIQ
                     SYRKDGYMIELGPESYLGRKTIMTELAKDIGLEQDIVTNKTGQSYIFAKNKLYPIPGG
                     SIMGIPTDIKPFVTTKLISPLGKLRAGLDLLKKPTQMRDGDISVGAFFRARLGNEVLE
                     NLIEPLMGGIYGTDIDKLSLMSTFPNFKEKEEAFGSLIKGMKDEKNKRLKQRQLYPGA
                     PKGQFKQFKHGLSSFIEALEQDVKNKGVTIRYNTSVDDIITSQKQYKIVYSNQQEDVF
                     DGVLVTTPHQVFLNWFGQDPAFDYFKTMDSTTVATVVLAFDEKDIENTYDGTGFVIAR
                     TSDTDITACTWTSKKWPFTTPEGKVLIRAYVGKPGDTVVDDHTDDKLVSIVRRDLSQM
                     MTFKGDPEFTIVNRLPKSMPQYHVGHIQQIRQIQAHIKQTYPRLRVTGASFEAVGLPD
                     CITQGKVAAEEVIAEL"
     gene            complement(6764..7687)
                     /gene="hemH"
                     /locus_tag="W681_RS15720"
                     /old_locus_tag="W681_02366"
     CDS             complement(6764..7687)
                     /gene="hemH"
                     /locus_tag="W681_RS15720"
                     /old_locus_tag="W681_02366"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500460.1"
                     /GO_function="GO:0004325 - ferrochelatase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="WP_000162876.1"
                     /translation="MTKKMGLLVMAYGTPYKESDIEPYYTDIRHGKRPSEEELQDLKD
                     RYEFIGGLSPLAGTTDDQADALVSALNKAYADVEFKLYLGLKHISPFIEDAVEQMHKD
                     GITEAITVVLAPHYSSFSVGSYDKRADEEAAKYGIQLTHVKHYYKQPKFIEYWTNKVN
                     ETLAQIPEEEHKDTVLVVSAHSLPKGLIEKNNDPYPQELEHTALLIKEQSNIEHITIG
                     WQSEGNTGTPWLGPDVQDLTRDLYEKHQYKNFIYTPVGFVCEHLEVLYDNDYECKVVC
                     DDIGANYYRPKMPNTHPLFIGAIVDEIKSIF"
     gene            complement(7744..8781)
                     /gene="hemE"
                     /locus_tag="W681_RS15725"
                     /old_locus_tag="W681_02367"
     CDS             complement(7744..8781)
                     /gene="hemE"
                     /locus_tag="W681_RS15725"
                     /old_locus_tag="W681_02367"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500461.1"
                     /GO_function="GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA]"
                     /GO_process="GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="WP_000233540.1"
                     /translation="MVHNKNNTILKMIKGEETTHTPVWFMRQAGRSQPEYRKLKEKYS
                     LFDITHQPELCAYVTHLPVDNYHTDAAILYKDIMTPLKPIGVDVEIKSGIGPVIHNPI
                     KTIQDVEKLSQIDPERDVPYVLDTIKLLTEEKLNVPLIGFTGAPFTLASYMIEGGPSK
                     NYNFTKAMMYRDEATWFALMNHLVDVSVKYVTAQVEAGAELIQIFDSWVGALNVEDYR
                     RYIKPHMIRLISEVKEKHDVPVILFGVGASHLINEWNDLPIDVLGLDWRTSINQAQQL
                     GVTKTLQGNLDPSILLAPWNVIEERLKPILDQGMENGKHIFNLGHGVFPEVQPETLRK
                     VSEFVHTYTQR"
     gene            complement(8771..8857)
                     /locus_tag="W681_RS0103910"
     CDS             complement(8771..8857)
                     /locus_tag="W681_RS0103910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_031875110.1"
                     /translation="MYLLKIRTNERYDNIDKNDFNLGGLYGA"
     gene            9043..9546
                     /gene="traP"
                     /locus_tag="W681_RS15730"
                     /old_locus_tag="W681_02368"
     CDS             9043..9546
                     /gene="traP"
                     /locus_tag="W681_RS15730"
                     /old_locus_tag="W681_02368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction protein TRAP"
                     /protein_id="WP_000737983.1"
                     /translation="MKKLYTSYGTYGFLNQIKINNPSHHLFQFSTADSSVIFEETEEN
                     TVLKSPSIYEVIKEIGAFNEDHFYCAIFIPSTEDHVYQLEKKLISVDDNFKNFGGFKS
                     YRLLRPVKGTTYKIYFGFADRQTYEDFKNSDAFKDHFSKEALSHYFGSSGQHSSYFER
                     YLYPIKE"
     gene            complement(9670..10893)
                     /locus_tag="W681_RS15735"
                     /old_locus_tag="W681_02369"
     CDS             complement(9670..10893)
                     /locus_tag="W681_RS15735"
                     /old_locus_tag="W681_02369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease EcsB"
                     /protein_id="WP_001245751.1"
                     /translation="MRNQATTLFNKRLHALRKEKNYFNKFIFNGHFMVFLLILLGAFI
                     FGYGEWLKHIPTNINFALIAAVIVALTSIFPMRPLLKEADKIFLLPFEKHMSQFMRHA
                     ILYSYFARILIQLIIVIVMFPLFYNINQHNVTFYICFGVSALIFPYVGLRLRWQWYQS
                     GLKTWQVNLISFIIFALTYYLLLAPKWYIALVMVALPVLIEFLVKKYKPGFLYPWEKM
                     IEIEHRHHMNYYKFVNMFTDVKHLKESAVRRSYLDILLPVPKGNKFNSNAMYLFLFIR
                     SFIRGRDAFNIIFRLVIIAVLLMVWLSYPLVTAIIGCLFVYIILLQMAQFYSQQAYGL
                     WPQVWPVPEEKVIKGYEQFLYRLMFVICTVFAVTFIIKHMTLFYVVLIFYIVGLLTIR
                     SIIKKLKYQETLLRD"
     gene            complement(10886..11626)
                     /locus_tag="W681_RS15740"
                     /old_locus_tag="W681_02370"
     CDS             complement(10886..11626)
                     /locus_tag="W681_RS15740"
                     /old_locus_tag="W681_02370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500465.1"
                     /GO_function="GO:0005524 - ATP binding [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein EcsA"
                     /protein_id="WP_000216874.1"
                     /translation="MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTT
                     IKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYIPESPVIYEELTLEEHIEMTAMA
                     YDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
                     FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLE
                     ALRQQTGLHNQTLDDIYIHVTQGGDVHA"
     gene            11760..12182
                     /locus_tag="W681_RS15745"
                     /old_locus_tag="W681_02371"
     CDS             11760..12182
                     /locus_tag="W681_RS15745"
                     /old_locus_tag="W681_02371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500466.1"
                     /GO_function="GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="WP_000004984.1"
                     /translation="MSETIFGKILTGEIPSFKVYEDDYVYAFLDISQVTKGHTLLIPK
                     KASANIFETDEETMKHIGAALPKVANAIKRAFNPDGLNIIQNNGEFADQSVFHIHFHL
                     IPRYENDIDGFGYKWETHEDILDNNAKQQIAEQIQAQF"
     gene            12324..12689
                     /locus_tag="W681_RS15750"
                     /old_locus_tag="W681_02372"
     CDS             12324..12689
                     /locus_tag="W681_RS15750"
                     /old_locus_tag="W681_02372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="WP_000648118.1"
                     /translation="MKASRILFGIGVGVAAGFVVALQGRDDKSVKNNTIDRTAPTGSK
                     SELQREFETIKQSFNDILNYGVQIKNESAEFGSSIGGEIKSLLGNFKSDINPNIERLQ
                     SHIENLQNRGEDIGNEISK"
     gene            13421..13979
                     /locus_tag="W681_RS15755"
                     /old_locus_tag="W681_02374"
                     /pseudo
     CDS             13421..13979
                     /locus_tag="W681_RS15755"
                     /old_locus_tag="W681_02374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500468.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3267 domain-containing protein"
     gene            14184..15146
                     /locus_tag="W681_RS15760"
                     /old_locus_tag="W681_02375"
     CDS             14184..15146
                     /locus_tag="W681_RS15760"
                     /old_locus_tag="W681_02375"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500469.1"
                     /GO_function="GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="foldase protein PrsA"
                     /protein_id="WP_000782119.1"
                     /translation="MKMINKLIVPVTASALLLGACGASATDSKENTLISSKAGDVTVA
                     DTMKKIGKDQIANASFTEMLNKILADKYKNKVNDKKIDEQIEKMQKQYGGKDKFEKAL
                     QQQGLTADKYKENLRTAAYHKELLSDKIKISDSEIKEDSKKASHILIKVKSKKSDKEG
                     LDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEK
                     ALFKLKDGEVSDVVKSSFGYHIIKADKPTDFNSEKQSLKEKLVDQKVQKNPKLLTDAY
                     KDLLKEYDVDFKDRDIKSVVEDKILNPEKLKQGGAQGGQSGMSQ"
     gene            complement(15267..16208)
                     /gene="yhaM"
                     /locus_tag="W681_RS15765"
                     /old_locus_tag="W681_02376"
     CDS             complement(15267..16208)
                     /gene="yhaM"
                     /locus_tag="W681_RS15765"
                     /old_locus_tag="W681_02376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exoribonuclease YhaM"
                     /protein_id="WP_001244175.1"
                     /translation="MRNIENLNPGDSVDHFFLVHKATQGVTAQGKDYMTLHLQDKSGE
                     IEAKFWTATKNDMATIKPEEIVHVKGDIINYRGNKQMKVNQIRLATTEDQLKTEQFVD
                     GAPLSPAEIQEEISHYLLDIENANLQRITRHLLKKYQERFYTYPAASSHHHNFASGLS
                     YHVLTMLRIAKSICDIYPLLNKSLLYSGIILHDIGKVRELSGPVATSYTVEGNLLGHI
                     SIASDEVVEAARELNIEGEEIMLLRHMILSHHGKLEYGSPKLPYLKEAEILCYIDNID
                     ARMNMFEKAYKKTDKGQFTDKIFGLENRRFYNPESLD"
     gene            complement(16205..19141)
                     /locus_tag="W681_RS15770"
                     /old_locus_tag="W681_02377"
     CDS             complement(16205..19141)
                     /locus_tag="W681_RS15770"
                     /old_locus_tag="W681_02377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="WP_000584628.1"
                     /translation="MIIKSLEIYGYGQFVQRKIEFNKNFTEIFGENEAGKSTIQAFIH
                     SILFGFPTKKSKEPRLEPRLGNQYGGKLVLILDDGLEIEVERIKGSAQGDVKVYLPNG
                     AVRDDAWLQKKLNYISKKTYQGIFSFDVLGLQDIHRNLNEKQLQDYLLQAGALGSTEF
                     TSMREVINRKKDELYKKSGKNPIINQQIEQLKQLESQIREEEAKLETYHRLVDDRDKS
                     SRRLENLKHNLNQLSKMHEEKQKEVALHDHSQEWKSLEQQLNIEPITFPEKGVDRYEK
                     ARAHKQSLERDIGLRNERLAQLKEEATQLEPVKQSDIDAFISLNQQENEIKNKEFELT
                     AIEKDIANKQRDKDELQANIGWSETHHDVDSSEAMKSYVSEQIKNKQEQAAYIKQLER
                     SLEENKIEDNAVHSELDSVEEKIVPEETFEKKKEYSQQVIELNEKENLYSKLKERFEI
                     EQQEKQKRQKLLRTTFILLTLVGIGLTAFSFISNNMLFGIIFAVLTLVFVIGIIMSKS
                     KEVDYSEAITDEIEEIKAQLAILDENYDLDFDLDEQYRIRDHWQQALKNKDILEEKRQ
                     YIEGRLNDAKGRHDELQSTVENVKDELYLSSKISNDLIVDSISTMANIKALDQHISDL
                     NQQRQQLVQELDTFYNHAEAVTKSQFVYFNKLSLFHDVQQWLKSAEDTNEKWRINAEN
                     TKLVTNELNHLNAQLEENNKEITALFDFINVGTEEDFYQHHEDYQTYTSNLSRFNDLT
                     KYLENQNYSYELSSSLSEKTTAQLEEEDHLLATQVDEYNEQYLEMQAQVSDLSAQINH
                     METDTTLANLRHEYHSLKNQLNDIAKDWASLSYLQSLVDEHIKQIKDKRLPQVINEAV
                     EILKHLTDGRYTMINYNEDSITVKHVNGQLYDPVELSQSTKELLYVALRISLIKVLRP
                     YYPFPLIVDDAFVHFDKKRTEKMLNYLRSLSEHYQVLYFTCVKDNIVPSKEVITLNKI
                     EEGGKR"
     gene            complement(19131..20327)
                     /locus_tag="W681_RS15775"
                     /old_locus_tag="W681_02378"
     CDS             complement(19131..20327)
                     /locus_tag="W681_RS15775"
                     /old_locus_tag="W681_02378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease SbcCD subunit D"
                     /protein_id="WP_000238216.1"
                     /translation="MVKFIHCSDLHLDSPFKSKSHISPKIFEDVQKSAYESFKNIVDI
                     ALQQDVDFVIIAGDLFDSENRTLRAEIFLKQQFERLQNEQIFIYVCHGNHDPLSSKIS
                     SNWPDNVSVFSNKVETYEAITKSGETIYIHGFSYENRASYENKIDEYPSSQGQKGIHI
                     GVLHGTYSKSSVNERYTEFILEDLNSKLYHYWALGHIHERQQLSDMPVINYSGNIQGR
                     HFNEQGEKGCLLIEGDHLKLKTKFYPTQYIRFEEATIETDKTSKQGLYEVIQNFKEQV
                     REEGKAFYRLTLVINSETLISPQDLLQVEEMITDYEENENQFVYIDELKIQYAQNDES
                     PLVNEFSAELLVDQTVFDKAMSDLYLNPRASKFLDDYGTFDHTALVNRAEEILKAEMR
                     GEQNDN"
     gene            complement(20624..20722)
                     /locus_tag="W681_RS0103915"
     CDS             complement(20624..20722)
                     /locus_tag="W681_RS0103915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_002869660.1"
                     /translation="MSVGSLVVLTTTEIAFPTEIFEKNQRTQQIKF"
     gene            complement(21260..21604)
                     /locus_tag="W681_RS15780"
                     /old_locus_tag="W681_02379"
     CDS             complement(21260..21604)
                     /locus_tag="W681_RS15780"
                     /old_locus_tag="W681_02379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002498160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF/YmcA family competence regulator"
                     /protein_id="WP_000290301.1"
                     /translation="MAVNLYDYANQLEQALRESEEYKAIKEAFANVKANEESKKLFDE
                     FRETQINFQQKQMQGEEIAEEDLQKAQEQAQAIEKDENISALMNAEQKMSQVFQEINQ
                     IIVKPLDEIYAD"
     gene            complement(21673..22797)
                     /locus_tag="W681_RS15785"
                     /old_locus_tag="W681_02380"
     CDS             complement(21673..22797)
                     /locus_tag="W681_RS15785"
                     /old_locus_tag="W681_02380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="WP_000992534.1"
                     /translation="MNALFIIIFMIVVGAIIGGITNVIAIRMLFHPFKPYYIFKFRVP
                     FTPGLIPKRREEIATKIGQVIEEHLLTETLINEKLKSKQSQQAIESMIQQQLQKLTKD
                     QLSIKQITSQIDIDLEQVLQTNGNQYIASQLNNYYTKHQNQTIASLLPNQLVTFLDQH
                     VDNATDLLCDRARNYLSSAKGTQDINDMLDTFFNEKGKLIGMLQMFMTKESIADRIQQ
                     ELIRLTSHPKARAIVTSLITNEYQTFKDKSLNGLLDASQFNEIAENLSVYVTTYASKQ
                     ANKPVVTLMPQFVDYLESQLSSKLANLIIEQLSIHLSTIMKKVDLRGLIEEQINTFDL
                     DYIEKLIIEIANKELKLIMSLGFILGGIIGFFQGLVAIFV"
     gene            complement(22976..23440)
                     /locus_tag="W681_RS15790"
                     /old_locus_tag="W681_02381"
     CDS             complement(22976..23440)
                     /locus_tag="W681_RS15790"
                     /old_locus_tag="W681_02381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500476.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="WP_000375864.1"
                     /translation="MDRQSFTDLIQTKFKMVRIEAGYTQDTMAQTIGLSKKTLVQIEK
                     ERVLPNWTTCISICALFRDSEVLNSTFGCDPLEIVQTISRNHCAYPNHAPTSDIYWNN
                     IETRNGYILQSNKVSNIYRVLNPDNQPIFGTSKMREAETYFNRNAKEELVHI"
     gene            complement(23798..24421)
                     /locus_tag="W681_RS15795"
                     /old_locus_tag="W681_02382"
     CDS             complement(23798..24421)
                     /locus_tag="W681_RS15795"
                     /old_locus_tag="W681_02382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500477.1"
                     /GO_function="GO:0003677 - DNA binding [Evidence IEA]"
                     /GO_process="GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]; GO:0006355 - regulation of
                     DNA-templated transcription [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="WP_001045136.1"
                     /translation="MNKVILVDDHYIVRQGLRFLLSTIENIEVLQDFADGETFLEYLK
                     EHEHPDIVLLDLVMPGMNGIEITEYIKAHYPHIKVLVLTSYVDDEHVISAINKGADGY
                     EMKDVEPQQLIETIRRVMNGEKMIHPKAQDVFETVSQKPHYTNKLSKREIEVLREMVK
                     GKTNKEIAETLFVSEKTIKTHVSHIFSKLQVSDRTQAAIYAMENKLI"
     gene            complement(24443..25555)
                     /locus_tag="W681_RS15800"
                     /old_locus_tag="W681_02383"
     CDS             complement(24443..25555)
                     /locus_tag="W681_RS15800"
                     /old_locus_tag="W681_02383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing sensor histidine kinase"
                     /protein_id="WP_000437967.1"
                     /translation="MEQRTRLALLKEIAEFLNEETEMYSMTQGALKYLIEGSNFTTGW
                     IFFINSVGEHELVSHVALPQSLTADHCHYIKDGSCWCVKAFNQRRLMKASNIVNCSRI
                     NLASKAFPSQNDNITHHATVPLKSGQEQFGILNVASPNTEIYSDEDLELLESVAFQLG
                     SAIKRIYLTDREKEAAKINERNRLARDLHDSVNQMLFSVKLTAHAAYGMSNESIAKQA
                     FKTIEETSQNAVNEMRALIWQLKPVGLEQGLIHALTAYSKLMHIQLNVNVEGLIDLSN
                     EIEENIYRALQECINNVKKHADTNKMDLTLKQMNDILYIDVIDYGQGFEIDNVQIASS
                     HGINNIKQRVKLLRGKVTFHSQPTKGTQIQFTIPIK"
     gene            25718..26539
                     /locus_tag="W681_RS15805"
                     /old_locus_tag="W681_02384"
     CDS             25718..26539
                     /locus_tag="W681_RS15805"
                     /old_locus_tag="W681_02384"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500479.1"
                     /GO_function="GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]"
                     /GO_process="GO:0001522 - pseudouridine synthesis
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="WP_000669380.1"
                     /translation="MKFKIPENFNDLSLRDIFQQLKVPKKDLHHLNMSKDITINDKPA
                     RLMDKVHTGDDVFVPTIDEKSNYVPSYRYAQIKYEDDDMAIVMKPKGVKTHPNDLKES
                     NTLMNHVIYTVDSDYVEPIHRLDQETVGLLIVAKNPLMKKILDRMLEDNDITRIYKAN
                     VKALLPLKPQTIDMPIGKDKFHSNKRRVSPTGQRAITHILTSKMIKETVCQLEIKLDT
                     GRTHQIRVHLAEIGHPVIGDPLYGDSTLRQLELESYKIEFVHPLTKEVISVSLDD"
     gene            complement(26994..28379)
                     /gene="fumC"
                     /locus_tag="W681_RS15810"
                     /old_locus_tag="W681_02385"
     CDS             complement(26994..28379)
                     /gene="fumC"
                     /locus_tag="W681_RS15810"
                     /old_locus_tag="W681_02385"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000116229.1"
                     /GO_function="GO:0004333 - fumarate hydratase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="WP_000116238.1"
                     /translation="MSVRIEHDTFGEIEVPADKYWGAQTERSKRNFPVGKERMPIEVV
                     YGFAQLKRAAALANFDLGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSN
                     MNVNEVVSYVANMYLKDHQSDESIHPNDDVNKSQSSNDTFPTAMHVALYQEVETKLEP
                     ALKLLRNTLKEKEDKFDSIIKIGRTHLQDATPIKLGQEISGWRYMLDRCETMLSESKK
                     HILNLAIGGTAVGTGINAHPEFGDKVAQYISENTGYPFVSSENKFHALTAHDEVVQLH
                     GTLKALAGDLMKIANDVRWLASGPRAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMV
                     AVQVMGNDTVVGFASSQGNFELNVYKPVIMHNTLQSIYLLADGMETFNNNCAVGIEPI
                     EENIDNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQTGYVTEEQFEA
                     WIKPEDMVDPH"
     gene            complement(28575..28970)
                     /locus_tag="W681_RS15815"
                     /old_locus_tag="W681_02386"
     CDS             complement(28575..28970)
                     /locus_tag="W681_RS15815"
                     /old_locus_tag="W681_02386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_000901018.1"
                     /translation="MLGKYWIQLLIATVIISLISIKAFPLAIGALYLPIIFKVIKLQL
                     NLSKGLIDDVNAQTFIKSNQSGIVISVICCLLITGILYYTLDGFYASLTGVLGTLVAL
                     NPYTTIVSAILYILTAIATVEATKTKYRN"
     gene            complement(29513..29665)
                     /locus_tag="W681_RS15820"
                     /old_locus_tag="W681_02387"
     CDS             complement(29513..29665)
                     /locus_tag="W681_RS15820"
                     /old_locus_tag="W681_02387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAS053 family DNA gyrase inhibitor"
                     /protein_id="WP_000031108.1"
                     /translation="MSKDKDPKLNYHEEENSMVTDFEDLKELGKEMEQISDQNDQEKN
                     SEEDSQ"
     gene            complement(29690..30289)
                     /locus_tag="W681_RS15825"
                     /old_locus_tag="W681_02388"
     CDS             complement(29690..30289)
                     /locus_tag="W681_RS15825"
                     /old_locus_tag="W681_02388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="WP_001251224.1"
                     /translation="MAMNFKVFDNSQLVAEYAADIIRKQFNNNPTTIAGFHLDTDQAP
                     VLDELKKNVEKHAVDFSQINILDYDDKKSYFEALGVPAGQVYPIAYEKDAIELIADKI
                     KTKENKGKLTLQVVSIDEQGKLNVSIRQGLMEAREIFLVVTGANKRDVVEKLYQENGK
                     TSFEPADLKAHRMVNVILDKEAAAGLPEDVKAYFTSRFA"
     gene            complement(30448..30918)
                     /gene="trmL"
                     /locus_tag="W681_RS15830"
                     /old_locus_tag="W681_02389"
     CDS             complement(30448..30918)
                     /gene="trmL"
                     /locus_tag="W681_RS15830"
                     /old_locus_tag="W681_02389"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500485.1"
                     /GO_function="GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006400 - tRNA modification [Evidence
                     IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="WP_000181394.1"
                     /translation="MTNHIVLYQPEIPANTGNIARTCAGTNTHLHLIKPLGFRTDDKM
                     LKRAGLDYWEFVNITYHDSIEAFFEATNGEYYLLTKFGKKTYSDFDFSNHDKDFYFIF
                     GKETTGLPDWVKEKYQDTALRIPMSEHIRSLNLSNTAALLIYEALRQQDFPGLN"
     gene            complement(30923..32050)
                     /gene="queG"
                     /locus_tag="W681_RS15835"
                     /old_locus_tag="W681_02390"
     CDS             complement(30923..32050)
                     /gene="queG"
                     /locus_tag="W681_RS15835"
                     /old_locus_tag="W681_02390"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000379983.1"
                     /GO_function="GO:0051539 - 4 iron, 4 sulfur cluster
                     binding [Evidence IEA]; GO:0052693 - epoxyqueuosine
                     reductase activity [Evidence IEA]"
                     /GO_process="GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="WP_000379980.1"
                     /translation="MDTKQLKQDIIDYAYTIGIDSIGFTTADPFDELKQKLEAYHANG
                     YASGFEESDIALRTEPKLSLPTARSIIAIAVGYPNKLKGAPKSVRGDRRGLFARASWG
                     QDYHTIMRKRLDMLAAFIESKVPDVEIKSMVDTGVLSDRAVAERAGLGFVGRNGFVIN
                     PKLGTWTYLGEMLVSIPFEPDDPLLDSCGDCTICVDRCPTSALVGNGQLNSQKCISFL
                     TQTKGYMPDQYRYKIGNRLYGCDTCQQVCPKNRGINTEQDDIILEPEILKPRLVPLLR
                     MSNKEFKQTYGHLAGAWRGKKPIQRNAILALAHFNEVDAIPELKKVATTDERPMIRAT
                     AYWAIGQILGEEARDFINANYDQEDAEVQNEMIKGLDTRRE"
     gene            complement(32201..32923)
                     /locus_tag="W681_RS15840"
                     /old_locus_tag="W681_02391"
     CDS             complement(32201..32923)
                     /locus_tag="W681_RS15840"
                     /old_locus_tag="W681_02391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017465289.1"
                     /GO_function="GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA];
                     GO:0016887 - ATP hydrolysis activity [Evidence IEA];
                     GO:0042626 - ATPase-coupled transmembrane transporter
                     activity [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="WP_031774878.1"
                     /translation="MIKINNLNKVFGDNEVLKDINLEINQGEVVAIIGPSGSGKSTLL
                     RCMNLLEVPTKGQVIFEGNDLTEKRTQVDKLRQKMGMVFQNFNLFPHKKVVDNIILAP
                     KLLKKDNNDELHKEALSLLDKVGLKEKADVYPNQLSGGQKQRVAIARALAMHPDVILF
                     DEPTSALDPEVVGDVLKVMKDLAKEGMTMVVVTHEMGFAKDVSDKVIFMADGVVVESG
                     TPVEIFEQPQHERTQNFLARVL"
     gene            complement(32916..34373)
                     /locus_tag="W681_RS15845"
                     /old_locus_tag="W681_02392"
     CDS             complement(32916..34373)
                     /locus_tag="W681_RS15845"
                     /old_locus_tag="W681_02392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500488.1"
                     /GO_component="GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA]; GO:0005886 - plasma membrane [Evidence
                     IEA]"
                     /GO_process="GO:0015837 - amine transport [Evidence IEA]"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc.; The
                     N-terminal region of this protein, as described by
                     TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc.; The
                     N-terminal region of this protein, as described by
                     TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="WP_000649908.1"
                     /translation="MKCLIRFILVLGLLISSAMVYINPTAHAEQDQTWEKIKERGELR
                     VGLSADYAPMEFEHTVNGKTEYAGVDIDLAKKIAKDNNLKLKIVNMSFDSLLGALKTG
                     KIDIIISGMTSTPERKKQVDFSDSYMMTKNIMLVKKDKVNEYKDIKDFNNKKVGAQKG
                     TEQEKIAQTEIENASITSLSRLPDVILALKSGKVEGAVVEKPVAEAYLKQNPKLGISN
                     VKFNEEEKDTVIAVPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGFISK
                     YGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPML
                     VQVFIVFFGITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSL
                     GLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISF
                     DPFTPLLVAAALYFVLTFVLTRIMNMIEGRLNASD"
     gene            complement(34630..35691)
                     /locus_tag="W681_RS15850"
                     /old_locus_tag="W681_02393"
     CDS             complement(34630..35691)
                     /locus_tag="W681_RS15850"
                     /old_locus_tag="W681_02393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIC"
                     /protein_id="WP_031796866.1"
                     /translation="MSNAKNADNKQFFSKVLNSIGAGVVIALVPNALLGEVLKIFKSG
                     NEILELTYQLVILIQSFMAFIIGVLAAHQFKFNGAGAAIVGTSAMIGSGAVVYSNNSF
                     MLKGIGDIINTSLVVIIACLIYMVLQNKLGSFELIILPVLVPIVSGGIGLITLPYIRK
                     ITQAIGNVIHSFTDLNPLLMSILISVAFSLLMVTPISLVAIATAISLNGLGSGAANLG
                     IVAACVTFLFGSLRVNSIGVNAVLLIGAAKMMIPVYLKNLIISIPLTINGIITGIIAY
                     VLQVKGTPLSAGFGYTGLVGPINAFNRMSGDPTMNIILLALGYFVIPFVSAFIVHELC
                     KKFIPIYSNDIYKFEVPKQ"
     gene            complement(36237..36320)
                     /locus_tag="W681_RS15855"
                     /old_locus_tag="W681_02394"
     tRNA            complement(36237..36320)
                     /locus_tag="W681_RS15855"
                     /old_locus_tag="W681_02394"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36284..36286),aa:Leu,seq:caa)
     gene            complement(36359..36433)
                     /locus_tag="W681_RS18120"
                     /old_locus_tag="W681_02395"
     tRNA            complement(36359..36433)
                     /locus_tag="W681_RS18120"
                     /old_locus_tag="W681_02395"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36398..36400),aa:Gly,seq:tcc)
     gene            complement(36537..36611)
                     /locus_tag="W681_RS15860"
                     /old_locus_tag="W681_02396"
     tRNA            complement(36537..36611)
                     /locus_tag="W681_RS15860"
                     /old_locus_tag="W681_02396"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36576..36578),aa:Gly,seq:tcc)
     gene            complement(36619..36692)
                     /locus_tag="W681_RS15865"
                     /old_locus_tag="W681_02397"
     tRNA            complement(36619..36692)
                     /locus_tag="W681_RS15865"
                     /old_locus_tag="W681_02397"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36658..36660),aa:Cys,seq:gca)
     gene            complement(36698..36769)
                     /locus_tag="W681_RS15870"
                     /old_locus_tag="W681_02398"
     tRNA            complement(36698..36769)
                     /locus_tag="W681_RS15870"
                     /old_locus_tag="W681_02398"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36735..36737),aa:Gln,seq:ttg)
     gene            complement(36781..36853)
                     /locus_tag="W681_RS15875"
                     /old_locus_tag="W681_02399"
     tRNA            complement(36781..36853)
                     /locus_tag="W681_RS15875"
                     /old_locus_tag="W681_02399"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36818..36820),aa:His,seq:gtg)
     gene            complement(36856..36929)
                     /locus_tag="W681_RS15880"
                     /old_locus_tag="W681_02400"
     tRNA            complement(36856..36929)
                     /locus_tag="W681_RS15880"
                     /old_locus_tag="W681_02400"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36895..36897),aa:Trp,seq:cca)
     gene            complement(36945..37025)
                     /locus_tag="W681_RS15885"
                     /old_locus_tag="W681_02401"
     tRNA            complement(36945..37025)
                     /locus_tag="W681_RS15885"
                     /old_locus_tag="W681_02401"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36989..36991),aa:Tyr,seq:gta)
     gene            complement(37031..37106)
                     /locus_tag="W681_RS15890"
                     /old_locus_tag="W681_02402"
     tRNA            complement(37031..37106)
                     /locus_tag="W681_RS15890"
                     /old_locus_tag="W681_02402"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37071..37073),aa:Thr,seq:tgt)
     gene            complement(37114..37186)
                     /locus_tag="W681_RS15895"
                     /old_locus_tag="W681_02403"
     tRNA            complement(37114..37186)
                     /locus_tag="W681_RS15895"
                     /old_locus_tag="W681_02403"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37151..37153),aa:Phe,seq:gaa)
     gene            complement(37205..37280)
                     /locus_tag="W681_RS15900"
                     /old_locus_tag="W681_02404"
     tRNA            complement(37205..37280)
                     /locus_tag="W681_RS15900"
                     /old_locus_tag="W681_02404"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37245..37247),aa:Asp,seq:gtc)
     gene            complement(37290..37363)
                     /locus_tag="W681_RS15905"
                     /old_locus_tag="W681_02405"
     tRNA            complement(37290..37363)
                     /locus_tag="W681_RS15905"
                     /old_locus_tag="W681_02405"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37327..37329),aa:Met,seq:cat)
     gene            complement(37378..37470)
                     /locus_tag="W681_RS15910"
                     /old_locus_tag="W681_02406"
     tRNA            complement(37378..37470)
                     /locus_tag="W681_RS15910"
                     /old_locus_tag="W681_02406"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37432..37434),aa:Ser,seq:tga)
     gene            complement(37509..37584)
                     /locus_tag="W681_RS15915"
                     /old_locus_tag="W681_02407"
     tRNA            complement(37509..37584)
                     /locus_tag="W681_RS15915"
                     /old_locus_tag="W681_02407"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37549..37551),aa:Asp,seq:gtc)
     gene            complement(37595..37684)
                     /locus_tag="W681_RS15920"
                     /old_locus_tag="W681_02408"
     tRNA            complement(37595..37684)
                     /locus_tag="W681_RS15920"
                     /old_locus_tag="W681_02408"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37646..37648),aa:Ser,seq:tga)
     gene            complement(37694..37767)
                     /locus_tag="W681_RS15925"
                     /old_locus_tag="W681_02409"
     tRNA            complement(37694..37767)
                     /locus_tag="W681_RS15925"
                     /old_locus_tag="W681_02409"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37731..37733),aa:Ile,seq:cat)
     gene            complement(37796..37869)
                     /locus_tag="W681_RS15930"
                     /old_locus_tag="W681_02410"
     tRNA            complement(37796..37869)
                     /locus_tag="W681_RS15930"
                     /old_locus_tag="W681_02410"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37833..37835),aa:Met,seq:cat)
     gene            complement(37891..37966)
                     /locus_tag="W681_RS15935"
                     /old_locus_tag="W681_02411"
     tRNA            complement(37891..37966)
                     /locus_tag="W681_RS15935"
                     /old_locus_tag="W681_02411"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37931..37933),aa:Ala,seq:tgc)
     gene            complement(37984..38057)
                     /locus_tag="W681_RS15940"
                     /old_locus_tag="W681_02412"
     tRNA            complement(37984..38057)
                     /locus_tag="W681_RS15940"
                     /old_locus_tag="W681_02412"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(38021..38023),aa:Pro,seq:tgg)
     gene            complement(38067..38140)
                     /locus_tag="W681_RS15945"
                     /old_locus_tag="W681_02413"
     tRNA            complement(38067..38140)
                     /locus_tag="W681_RS15945"
                     /old_locus_tag="W681_02413"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(38104..38106),aa:Arg,seq:acg)
     gene            complement(38159..38247)
                     /locus_tag="W681_RS15950"
                     /old_locus_tag="W681_02414"
     tRNA            complement(38159..38247)
                     /locus_tag="W681_RS15950"
                     /old_locus_tag="W681_02414"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(38211..38213),aa:Leu,seq:taa)
     gene            complement(38258..38332)
                     /locus_tag="W681_RS15955"
                     /old_locus_tag="W681_02415"
     tRNA            complement(38258..38332)
                     /locus_tag="W681_RS15955"
                     /old_locus_tag="W681_02415"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(38298..38300),aa:Gly,seq:gcc)
     gene            complement(38336..38417)
                     /locus_tag="W681_RS15960"
                     /old_locus_tag="W681_02416"
     tRNA            complement(38336..38417)
                     /locus_tag="W681_RS15960"
                     /old_locus_tag="W681_02416"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(38381..38383),aa:Leu,seq:tag)
     gene            complement(38421..38496)
                     /locus_tag="W681_RS15965"
                     /old_locus_tag="W681_02417"
     tRNA            complement(38421..38496)
                     /locus_tag="W681_RS15965"
                     /old_locus_tag="W681_02417"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(38461..38463),aa:Lys,seq:ttt)
     gene            complement(38502..38577)
                     /locus_tag="W681_RS15970"
                     /old_locus_tag="W681_02418"
     tRNA            complement(38502..38577)
                     /locus_tag="W681_RS15970"
                     /old_locus_tag="W681_02418"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(38542..38544),aa:Thr,seq:tgt)
     gene            complement(38594..38669)
                     /locus_tag="W681_RS15975"
                     /old_locus_tag="W681_02419"
     tRNA            complement(38594..38669)
                     /locus_tag="W681_RS15975"
                     /old_locus_tag="W681_02419"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(38634..38636),aa:Val,seq:tac)
     gene            complement(38681..38795)
                     /gene="rrf"
                     /locus_tag="W681_RS15980"
                     /old_locus_tag="W681_02420"
     rRNA            complement(38681..38795)
                     /gene="rrf"
                     /locus_tag="W681_RS15980"
                     /old_locus_tag="W681_02420"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(38869..>39058)
                     /locus_tag="W681_RS0103930"
     rRNA            complement(38869..>39058)
                     /locus_tag="W681_RS0103930"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
CONTIG      join(JIKL01000020.1:1..39058)
//
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