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Bifidobacterium pullorum subsp. saeculare DSM 6531 = LMG 14934 strain DSM 6531 contig20, whole genome shotgun sequence

NCBI Reference Sequence: NZ_JDTM01000020.1

FASTA Graphics 

LOCUS       NZ_JDTM01000020        29553 bp    DNA     linear   CON 30-MAR-2024
DEFINITION  Bifidobacterium pullorum subsp. saeculare DSM 6531 = LMG 14934
            strain DSM 6531 contig20, whole genome shotgun sequence.
ACCESSION   NZ_JDTM01000020 NZ_JDTM01000000
VERSION     NZ_JDTM01000020.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN02442043
            Assembly: GCF_000770965.1
KEYWORDS    WGS; RefSeq.
SOURCE      Bifidobacterium pullorum subsp. saeculare DSM 6531 = LMG 14934
  ORGANISM  Bifidobacterium pullorum subsp. saeculare DSM 6531 = LMG 14934
            Bacteria; Bacillati; Actinomycetota; Actinomycetes;
            Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.
REFERENCE   1  (bases 1 to 29553)
  AUTHORS   Sun,Z., Zhang,W., Guo,C., Yang,X., Liu,W., Wu,Y., Song,Y.,
            Kwok,L.Y., Cui,Y., Menghe,B., Yang,R., Hu,L. and Zhang,H.
  TITLE     Comparative genomic analysis of 45 type strains of the genus
            Bifidobacterium: a snapshot of its genetic diversity and evolution
  JOURNAL   PLoS One 10 (2), e0117912 (2015)
   PUBMED   25658111
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29553)
  AUTHORS   Zhang,H.
  TITLE     Genomic characterization of the genus Lactobacillus
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 29553)
  AUTHORS   Zhang,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-DEC-2013) School of Food Science and Engineering, Key
            Laboratory of Dairy Biotechnology and Engineering, Ministry of
            Education, Inner Mongolia Agricultural University, 306 Zhaowuda
            Road, Huhhot, Inner Mongolia 010018, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JDTM01000020.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method       :: SOAPdenovo v. 2.01
            Assembly Name         :: DSM-6531
            Genome Coverage       :: 278.3x
            Sequencing Technology :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_000770965.1-RS_2024_03_30
            Annotation Date                   :: 03/30/2024 00:54:19
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.7
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 1,895
            CDSs (total)                      :: 1,835
            Genes (coding)                    :: 1,797
            CDSs (with protein)               :: 1,797
            Genes (RNA)                       :: 60
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 53
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 38
            CDSs (without protein)            :: 38
            Pseudo Genes (ambiguous residues) :: 0 of 38
            Pseudo Genes (frameshifted)       :: 8 of 38
            Pseudo Genes (incomplete)         :: 34 of 38
            Pseudo Genes (internal stop)      :: 1 of 38
            Pseudo Genes (multiple problems)  :: 5 of 38
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29553
                     /organism="Bifidobacterium pullorum subsp. saeculare DSM
                     6531 = LMG 14934"
                     /mol_type="genomic DNA"
                     /submitter_seqid="contig20"
                     /strain="DSM 6531"
                     /sub_species="saeculare"
                     /culture_collection="DSM:6531"
                     /type_material="type strain of Bifidobacterium saeculare"
                     /db_xref="taxon:1437611"
     gene            292..1806
                     /locus_tag="OU28_RS08315"
     CDS             292..1806
                     /locus_tag="OU28_RS08315"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004218308.1"
                     /GO_component="GO:0005886 - plasma membrane [Evidence
                     IEA]"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="WP_051916085.1"
                     /translation="MTFENTPFPETEQSIFRSIRRRPLWRYIYVAALVAVDVLVMLLS
                     LVICFAFNPGAYDTVTRAMPIWAFLLAYCVIGLLCLAFAGAYHRHVMAEGYELYTKLI
                     NAAIFTIVLASCVAFMLNLQLPRTALIIAPLVGLVCELVARWMMRCLLHHHRRRGECK
                     YTTVIVGSSEGINRTLRLMRRNSALGYMPVAVCPIAPDPRMDDAYVVTNFVADPDIEG
                     ADKLRVLSFGSRFARTIERMGVQEVYIADVLSRDSKLLHAMSLAIESLGIELAISVSL
                     ADVGGHRLHLRNSAEQQVLIASLPQYRTTTYVIKRIIDIVLSAVALVISSPIMLGVAI
                     AIKLDDGGPVLFKQTRVGIHGKPFTMYKFRSMVTNAEEIKAKLAAESGQTDRFIFKLK
                     DDPRITKVGKFIRKTSLDEFPQFFNVFKGDMSLVGPRPALPDEVARYGSLYSTRLLVK
                     PGITGPWQVSGRSDLSQEQSEFLDVSYIENWSITGDLAILAKTVMVVFRGTGSY"
     gene            2202..3482
                     /locus_tag="OU28_RS09305"
     CDS             2202..3482
                     /locus_tag="OU28_RS09305"
                     /inference="COORDINATES: protein motif:HMM:NF024594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4012 domain-containing protein"
                     /protein_id="WP_238556959.1"
                     /translation="MRDHELAAVEAVSGLQDVSQLRDADTMNAAIEQAQVHASAAKEI
                     ADGALWRVASYVPVLGDDVTAVRGMVDVVDGMVGETLPSLASTVQTLMNSGLSGGGEG
                     QLNLQPIVDAQDGFSKVNELVQQQADAINALPQPHVGVVRSAYEQGKEQINKVADMLD
                     QVNGMVQAMPKLLGQDGPRTYLLVAQTTSEQRSGGGLVGSLGTMQVDNGNISVGEFHS
                     NKEFLTLGESATAEEHDVFSDPLYFSFDVRDLFAVPDFSRTAEMLNTVWQRSEYACDI
                     DGVIAIDPLFIQEMVRINGDITLDNGQVLTGDNTAEFMLNGIYKAFDPDTQDMYFEYV
                     ASAVMDGAFSNMTMDKMMQIAQAMGSLSEGRHFYAYTFHEDEAEYFQGAGFAKNAPDS
                     ETDPEVGIYMNEQNASKLGWYLQRFQYGHPYRLQ"
     gene            3505..3891
                     /locus_tag="OU28_RS10395"
     CDS             3505..3891
                     /locus_tag="OU28_RS10395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_238556960.1"
                     /translation="MTFSITNTLTSDEMAGATTYILGGAQPGVDGIVAPAGTSAQRML
                     FYAPAGGSITNLTASGDVRDQENKTMDGKNLITNVAYIAPGETVTFDFDVTTSAKAES
                     DLRLDQTPAGWLDENVTYDTSACSIK"
     gene            complement(3903..5612)
                     /locus_tag="OU28_RS08325"
     CDS             complement(3903..5612)
                     /locus_tag="OU28_RS08325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006292933.1"
                     /GO_function="GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /GO_process="GO:0055085 - transmembrane transport
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MDR family MFS transporter"
                     /protein_id="WP_033510307.1"
                     /translation="MSGIIKRDLSKPLTPEESFANGHLTHAAMVSIAILTFITFCGNF
                     TQLQLSAALPTIVAEFGISVTTGQWLTSIFQLVMGVMVPLTAYLTRRFSTRQIVITSM
                     SIFTIGSLMAWVSPTFILVLLGRMLEAIGTGVMWPVLQITVFSIYPLSRRGMAMGMVG
                     MAMSVAPAIGPTFGGWQTDANGWRSIFLTLTAIGAFALVLATFWLHNFGATDKTVKAD
                     FFSVFLSVFGFGGLMFGFTNIESYPFAHPLVWLPMVVGMVGIVWFILRQLGNKRAWVE
                     AQGRNESDASQSDVSQSQTATANAVGIADTADAADAHEGLLHGHLRFHRWHRTTGREP
                     LLDLEVLKNRSFTVGTITAALSFFAFSSITVILPLYIQDDRGFSATMSGLIMLPGALG
                     QAIAQFFGGKALDRFGARPVALIGTITLCFGTVMMSLISLDSWIWWVSIWQFVRQIGM
                     GFVLMPITTWSLNCLSPKEVSAGSAVTNTVRQIAGAIGAPVLVILMETFAAMRQTALG
                     GGADVAIAASVFGVQWALRVSAVICFGMVLMVFFGVKGNGAGSTHDLVQRALRRMHEV
                     IEH"
     gene            complement(5793..6800)
                     /locus_tag="OU28_RS08330"
     CDS             complement(5793..6800)
                     /locus_tag="OU28_RS08330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003844653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G5 domain-containing protein"
                     /protein_id="WP_033510309.1"
                     /translation="MANHRKKTSISLPSLNKRQWIRIGAVAAVLALVATGGIITRSFY
                     ASDGHSAAQQITAFSATDPLTVSRGSARDGVRGMDGDTSYVTVKLDGQSRTVLGTDFT
                     TVKSVLEAGNITLGPNDTVDPALDAEVSESTVITIETADSALETSEEPIAFNTVRKET
                     SSLPKGTEQVETEGEEGVMETTSLVTRAGDTVISSNVFASYVKKAPVDKVILVGTGSA
                     SSSSSSSSSASIGTTVPAGEMQQWAHDYLLANGYSEADFSATVYIINHESGWRVNATN
                     ASSGAYGLPQALPGSKMASAGADWATNYQTQLKWFWGYCNSRYGSVQGAYNFWVANHW
                     Y"
     gene            complement(6915..7274)
                     /gene="trxA"
                     /locus_tag="OU28_RS08335"
     CDS             complement(6915..7274)
                     /gene="trxA"
                     /locus_tag="OU28_RS08335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014485832.1"
                     /GO_component="GO:0005737 - cytoplasm [Evidence IEA]"
                     /GO_function="GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="WP_033510310.1"
                     /translation="MATHAVSSAEFEQVITGNELVFVDFWATWCGPCRAFGPVYEQAS
                     EKHPDVYFAKVDIDQNQDLASAAGVQAVPTLMIVKQGTVVFQQAGALRASDLEDLIAQ
                     AKALDLKAAQAEADAQQ"
     gene            7440..8063
                     /locus_tag="OU28_RS08340"
     CDS             7440..8063
                     /locus_tag="OU28_RS08340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013363143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4916 domain-containing protein"
                     /protein_id="WP_033510312.1"
                     /translation="MPVLNDEVPDEGDFDAGRRRGEFDDITPEDFIRGSAGGNPPGWL
                     DAARVGQVRRQVPMVYVEVVPVHTDEFGRIAEIGTLLRVSDDGSVERTLVAGRVLYHE
                     SLREAIARNVAKDLGPLALPTLPPNLQPFTVAEFFPTPGLSEFYDARQHAVALCYVVP
                     IAGDCQPQDEALDVEWVDVNGPRLATMLDQMAGGHGRIVQRALAWTE"
     gene            8098..8949
                     /locus_tag="OU28_RS08345"
     CDS             8098..8949
                     /locus_tag="OU28_RS08345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003835427.1"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="WP_033510313.1"
                     /translation="MELNTTIYRDGEGIPVVLVHAFPIDHHLWDDCAAELIVRANAAG
                     LPRFPIWAPDMPGAGEGPIPTAEQTGAIAQDGAYTEALDRMADAYVDLIRKAGFTKAI
                     WVGLSMGGYLVLDIQRLHPEAVAGLALCDTKADADSAASRANRLRIADICETEHTVDP
                     VMHFAEPQPGDSTIKRAPRFIRQFTGWIQAQRPEGVAWRERMAAGRPDLNDQLPLITA
                     PAAVICGENDPSSAPSVMRPIAEAMTGTNAVFTEIPDCGHFSAYEHPDQVADALLDLV
                     RRVQAGA"
     gene            8951..10042
                     /gene="nudC"
                     /locus_tag="OU28_RS08350"
     CDS             8951..10042
                     /gene="nudC"
                     /locus_tag="OU28_RS08350"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015449950.1"
                     /GO_function="GO:0016787 - hydrolase activity [Evidence
                     IEA]; GO:0000210 - NAD+ diphosphatase activity [Evidence
                     IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="WP_033510315.1"
                     /translation="MALLSPLALTQTLPFLPLAQGDIDYQTERRDEPGLIPSLLDDPS
                     TTVILVRDGLVAVPRGQGVLAARESVSMRLASLPGSYAAEALAGAPEAVAMFLGGYPG
                     RRNAHIVAIDLTRVPMGAPSVVPDAHGIGADDAFGNAAQPNTANGRVPLFARTAERFD
                     WVDLRGFVPHASAREAGQATTAVALSLWHVTQRHCPTCGAPVQTAMAGWAQRCTNPQD
                     GQRLLFPRVEPAVIVAVVDSRDRLLLQHNRAWNDPTLYSVSAGFVEAGENLEHACRRE
                     TKEEVGIDLGEVRYLGSQPWPFPASLMVAFKAYALNTDIRTDGQETVDARWVSRDEYT
                     AELVRGVMSAPNRAAIARYMIEEWYGRAL"
     gene            10102..11679
                     /locus_tag="OU28_RS08355"
     CDS             10102..11679
                     /locus_tag="OU28_RS08355"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /GO_function="GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="WP_033510316.1"
                     /translation="MSDDYQMDGFSQMDDDRTVAMPPVGDASPMTMGEDAIALSCDEE
                     KPRNTKLPWIITLSVIGALLVLAVAGLFTARWYFSDKAAPGVTLGQISVAGQNRDRLT
                     DTVTRAIADSTLTVADPDGQEIKASLEELGVSVDVDATVDALLNAKTDGDATGVRALL
                     SDFARLNPFSKADIGLSAEYDEYTANTFLTDRFVADDQQAVPSSIAYDAGSQAFTVTE
                     GKVGRAPQLDAVNKAVANAIKAPGTGASVKIDYSDVDMPIGVDAANQAAADANQRLNN
                     KIVLTNERDRNFELSNDTVASWVKPTGDVQNGTLTLSYDEQAIKDYLAAELPKQLNQE
                     KTDQTDIIDDNGNVLLTRVDGVDGVAVKNTDTTAAKVLEALEAGNGGLITAEFDVTPF
                     ETKQEKATMRIVVDKSSQTATVYNNNQLVRTFPVCTGTFYIYLKYAVQDMRGYNEDGS
                     KYLSPGVKWVGYFNGGEGFHTADWNYYGIQVGDPAHYGSHGCVNMYEADAKWIYDNCP
                     EGTIVQVVGSTPSGPVR"
     gene            11733..12134
                     /gene="gcvH"
                     /locus_tag="OU28_RS08360"
     CDS             11733..12134
                     /gene="gcvH"
                     /locus_tag="OU28_RS08360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008783171.1"
                     /GO_function="GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /GO_process="GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="WP_033510327.1"
                     /translation="MSETNETPLNLDVPEHLEYSEEHVWVDASVEPAMVGLTEYAVSQ
                     LGELVFVDLPEPGIRVEAGDEIVELESQKAVQPLVCPVAGTVRYVNREASDDPSIITN
                     DPYGEGWILKIELDDDEPALLTAEEYAKLVK"
     gene            12195..13415
                     /locus_tag="OU28_RS08365"
     CDS             12195..13415
                     /locus_tag="OU28_RS08365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013363147.1"
                     /GO_function="GO:0008195 - phosphatidate phosphatase
                     activity [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="App1 family protein"
                     /protein_id="WP_152595119.1"
                     /translation="MSDSRRTSPQVHQPTDDMPTVPIPARRVVTTFDSASKHERIEVK
                     PPLVRLFRRAVSTMFNLWMRVSTPVVEQLGWYDQIEPYVGYGTEAYSRLICRTVYAPE
                     HHRPGARIRGIWGMLAIPAPHRRVRVAIDGTPLETVQVGTSESYDKPDAKRRQTAEYA
                     VSDSAGYLDLVAEHRLSPGIHRVSYRVDRRKPVTANLFTIPSGSKVGIISDVDDTIMI
                     TQVPTLWKAAYNVLFANPKKRASVPGMSVLFTKLAALFPEAPFFYLSTSPWNVESSIR
                     HFINDHGFPAGPLLLRDLDPRPKTFIPTGVQHKLEFAEQLMGDFPDMKFILIGDDGQK
                     DPTTYATIARRYPGRVIAIGIRQLSPREASPLGSVAGVSATQPMPVTDVPVFTGTTGA
                     NLMKTMLPYLERFA"
     gene            13548..16061
                     /locus_tag="OU28_RS08370"
     CDS             13548..16061
                     /locus_tag="OU28_RS08370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007053748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="WP_033510328.1"
                     /translation="MERGVSSENVASMPPIARREPVARTHHGDTFLDPYAWMKDKDSA
                     EVRDYVTAQNAYGEQRTAALGPLRDTLFNELTSRIQQTDMSVPTRMDGYWYFTRTREG
                     SQYAVQCRLPIRGEDDWTPPRIDPLSEPGSMPSEQVVFDTNREAEGHDFFQVGGMDLS
                     RDGRWMLYGVDTRGDERYDFRIRDLQSGTELPEVLEGIAGACITPDARWVFYTVLDDA
                     WRPCAVRRHKVGTPVSDDVEVFREHDERFWLGVGLSFDERNIVIGTGSKTTTEVLMLP
                     ADTPEGEFRAFIPREPDIEYDVSFARFEGAGEDGADIPLAVVYHNAFNPNFEIDVIDM
                     RLHEPPYRLGEGVCIAQGSPYGCEQGDRVEPGASAKPIGTAYRNPANPAILQGARGLG
                     IEGIALHRHYVALSYRADGMTHLGVMTKRDAAEDFLAGRPWRFRELLPPTLEGDWDVP
                     DSGVAAPAGNSDSLDSDTCFTGCFTQHSPSDPSGASSPSDSADASDPSGSSADGLPDV
                     TRRLYTIAAGGNPTYEAPRMRYTFSGYTRPGELHEFDPATGEDLLLKRARVLGDFDPR
                     NYMERRMWITARDGERIPVSLVWRRGVALDHLPMFVTGYGAYEISSDPGFSVARLSML
                     DRGVLYAVPHIRGGGEMGRAWYEQGRRLSKRHSFEDFVDAVAALQDAGLADPERTVAV
                     GGSAGGLLMGAVANLAPERFAGIEADVPFVDALTSILDPSLPLTVTEWDEWGDPLHDP
                     EVYRYMKSYTPYENAPESPDDPRVARFPKILITTSMNDTRVLVVEPLKWMARLQAAGV
                     DVIAKIEVEAGHGGTTGRYKQWKEVSFENAWCLRTMGVA"
     gene            16134..17174
                     /locus_tag="OU28_RS08375"
     CDS             16134..17174
                     /locus_tag="OU28_RS08375"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015438492.1"
                     /GO_function="GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA]; GO:0000287 - magnesium ion
                     binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence
                     IEA]"
                     /GO_process="GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="WP_033510318.1"
                     /translation="MSETTTKYRIAVIPGDGIGKEVTPWAQKALEQAVQGAADFEYEN
                     FDLGAERYLRDGAILPDEELERIKTTDAILLGAVGDPRIKAGILERGLLLRLRFELDQ
                     YVNLRPSKLYKGVTSPLANPGEIDFVVVREGTEGLYCGAGGAVRRDTPAEVATEVSIN
                     TAYGVERVVRYAFDLAMKRRKHVTLVHKKNVLVNAGDMWQRIVDRVGREYPEVSHDYC
                     HIDAATIYMVSDPSRFDVILTDNLFGDILTDEAGAVVGGVGYSASGCINACNEFPSMF
                     EPIHGSAPDIAGKGIANPTAAILSAAMLLRHLGFDEDAARIDAAVEADIAELGSTPRS
                     TDEIGRDILARL"
     gene            17519..18940
                     /locus_tag="OU28_RS08380"
     CDS             17519..18940
                     /locus_tag="OU28_RS08380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003816535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase family protein"
                     /protein_id="WP_033510319.1"
                     /translation="MGMRRGAVKTPGGKLVAVTVQTDQSGLPVACRLDGDFFIDGDGA
                     PLLLDDLERTLLACAREVSAGKTDVMDGSALPTPAAREHADVQGRAARPEAHDDGVRT
                     DAVVDAVDIVNWRDRLLQACAQHDGVRLVGTGAEAMARALSRAMGIGDESAASAVGLN
                     GTVNDAVTKTGMSAGPQLADVPPNDMVADAVAETGPLAGAASYGLCGHRPAPHAGWPS
                     DWLDRWRRLAPVVIHDVPRSPVEQMAIDEQWAREVAAGERPASLRFWEWSSPAVVVGR
                     FQSIPDEVHVDEAERLGFTVVRRCTGGGTMVVQPGGAITYSLYAPRWFVDGLDAAEAY
                     RLCDSWLIDALRGLGVDARFQGLNDIAVADDACRDTVGGQEPAQWGKAGGAAQRRFPA
                     PPDSDGPGAVLHHTTLAYELDGALMARLLNTSPEKLSDKAVRSASKRVAPLGMQPPLQ
                     GMGRDGLIRALSRSLGQFLSTNS"
     gene            19193..19906
                     /locus_tag="OU28_RS08385"
     CDS             19193..19906
                     /locus_tag="OU28_RS08385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004110206.1"
                     /GO_function="GO:0030552 - cAMP binding [Evidence IEA];
                     GO:0003700 - DNA-binding transcription factor activity
                     [Evidence IEA]"
                     /GO_process="GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="WP_033510320.1"
                     /translation="MATPNAIPNDENTLLHTALFKQVSPEQAEELLPTLRESVYDKGE
                     HIFTQGDTDHRMGLLEKGRVKLTRESNDGRVQLLSIHARGEVLGEIPVFDPTGGPRTA
                     SAVAMVNGTRVVWLEHDALFAWLDRYPRVAVDMLQVLANRMRSNNERITDLVFMDVPA
                     RLAKTLLDLASRFGEPVEAGLKVPHDLTQEELAQLVGSSRETVNKALMDFSNRGWIAR
                     EGRSIVIYQPGMLIRRSRR"
     gene            20165..22402
                     /locus_tag="OU28_RS08390"
     CDS             20165..22402
                     /locus_tag="OU28_RS08390"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016636461.1"
                     /GO_function="GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="WP_152595120.1"
                     /translation="MPKKKSMTIRRALSLVLAYIVLCVTGGVVASLLFVPAVFGANTV
                     AKAVIPSLQVEGIDFDVTSLPQQSRMYASDGSLIATFYSQNRVVVPIKDVSEYMQKAI
                     VAREDRRFFEHSGVDVQGVMRAFIQTYVLKRDMQGGSSLTQQYVKNVLMVQAREDNDP
                     IAEYHAQESTIARKLREMLIAVQMEKMYSKPEILQGYLNIAQFGSNNLYGVETAAQRY
                     FNVHAKDLNLVQSATIAAITKNPAGLDPSIPENQEDSENERNIVLKLMLDQGLIEQAE
                     YDEAVNIPLVDTLNIQSVNQGCQSAGNAAFFCSYVTTKILNSEEFGETEADRQKLLNE
                     GGLDIYTTMDVNANNAAMQAANDTIPASDSSGLEVMIAAIKPGTGEVLGFGINRTYDA
                     TDAAASDQTKTSMNYMVDQADGGGWGVQVGSTWKPINMVAWMQQGRSINESLRTSTSY
                     PLSNFNCGNYTFANTNWKVENSGGGTVNPETPLQGLIRSHNTTQASMASQIGLCAIAD
                     AATALGYHNAPSSAMDVYSSNSFNAPMTIGAVQASPLTMANVYATLGANGVACTPIAM
                     TRVTDKNGDEIDVPQADCHQAIDPEIAQTTAYALNQGVVTAGGEAATTQLDNGRKTFA
                     KTGTNENTYMLTAGFVPNVVSAFVAVGDAQDPTHNTFDNKTINGVYRSEWFGMYIATP
                     AWKQFMNMYLNAINAPIDNNYGNPAQKYLTVSRVQATTNGQNNQNNQTTQNGQQAQNQ
                     NQGDQ"
     gene            22528..23853
                     /locus_tag="OU28_RS08395"
     CDS             22528..23853
                     /locus_tag="OU28_RS08395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007053744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase"
                     /protein_id="WP_033510321.1"
                     /translation="MMQDDLTHDNFDFRGFSKENRHETELIRDEEERSSKKPAKAGKA
                     GKNKAGKNSKDAGRERKAEKAGKAEKKAAVSAKPQGKRPLLFTPMQLRGLTVRNRVWL
                     PPMDTYSAYAWDGKPTPFHYQHYVSRALGGFGLIIAEATAVCPEGRISPKDVGLWEDS
                     QIEAWRWIVQGVRDAGAAMAVQLNHAGRKGSTGCFGVGHDGESVPVEEGGWQTVAPSP
                     NAYGSYAVPRELSVDEIHTIVGQFAAAAGRAVAAGFQAVEIHAAHGYLISQFLDPLVN
                     ERTDEYGGDLNGRMRFLVEIVDAVRAAIPQDMPLLVRISATDWAAGGWDLGQTVAASR
                     VLKDHGVDLVDVSTGGIVPDVTIPVKPNYQVPFAAQVRAQAGVPTTAVGLITKPKQAE
                     KILRAEQADAIEIGRAALRDPAWPMRAAHKLGLAPADLPYPDQYIRGAY"
     gene            complement(23886..25034)
                     /locus_tag="OU28_RS08400"
     CDS             complement(23886..25034)
                     /locus_tag="OU28_RS08400"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003841077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="WP_033510322.1"
                     /translation="MTYVSESFWHDAVNKATTDLFTFGYKHIVKPNFVFNHTPDVAHD
                     QMIEFCRVTGNIPPLMWLLREMLNYTDPVLETSVMGVDFANPFGLSAGLDKNCDMPVL
                     MDNAGFGFETVGSTTSRPCAGNPKPWFHRLPEYDSMMVHVGLANDGSDKVIARAEQAW
                     TKARSLQVSVSIARTNDDLAGDIDEGIEDYRISLERAAGRSAMVEINVSCPNTRAGEP
                     FTESPENLDRLFSVLDTVDRPQPTLVKMPLNKSWEEFRDLLAVLAEHNVQGVSIANLQ
                     KDRTGLEIPRDWEGGLSGGPTYRASNELVRRTYREFGDRFAIAGIGGVFTPEQAYAKI
                     RSGASLVMFISSLMYRGPQQITVLKRGLASLLKRDGFEHVSEAVGVDA"
     gene            25232..26035
                     /locus_tag="OU28_RS08405"
     CDS             25232..26035
                     /locus_tag="OU28_RS08405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012578333.1"
                     /GO_function="GO:0003700 - DNA-binding transcription
                     factor activity [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family DNA-binding transcription
                     regulator"
                     /protein_id="WP_033506672.1"
                     /translation="MISSQRQHLILSRLRTRGAVRITALSKELGVSAMTIRRDIAELA
                     DKGLLKRVHGGAVTTSTLLSEPLFSVKSQMDVGLKDAIAREAVAYVAPGDVIAIGGGT
                     TAYVFAQHLLESQQASGITILTNSIPVAELVQALESKDVEVIVTGGVITRSNSLVGPI
                     ADKVIASLRVNTVFLGTHSVSVPRGFLMPNSLEAATDMAMMDIADRTIILTDHTKWSS
                     TSLSLFARFDQVDTVITDDGLDPDSVAKTRDLVKELVLAHQSEPTEESE"
     gene            26041..27291
                     /gene="galT"
                     /locus_tag="OU28_RS08410"
     CDS             26041..27291
                     /gene="galT"
                     /locus_tag="OU28_RS08410"
                     /EC_number="2.7.7.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007053742.1"
                     /GO_function="GO:0008108 - UDP-glucose:hexose-1-phosphate
                     uridylyltransferase activity [Evidence IEA]"
                     /GO_process="GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-phosphate uridylyltransferase"
                     /protein_id="WP_033510330.1"
                     /translation="MSEYANYTPGPYAAENIRITPTTLADGRDFFYLDDDPEYVSGAK
                     TRELNDPRQLAYRFANQLNAAGEEVPYAAPEMRRDPLTGDWIPMATARMNRPITAGPG
                     ATAKGNPLAARKPGDPYQDGEVPDTDYNVVVFENRFPSMVRVPGRSDAVEYVDGNPLW
                     EKKMAAGRCEVICFDPDEDGLPANLPVKRLRTVVEAWAFRTAEISTMEGIEQIFPFEN
                     HGQEIGVSLAHPHGQVYCYPFIAPKMEAELQHTEAYFEKTGGNLLKDIMNAEIEAEER
                     IVLRNHSWVAYVPAAARWPLEVHVAPVRDVLTLDQLDDQERWDLAEMYSALLKRGNAF
                     FDKGDGLGMDLPYIAAWHQAPIHDARREHYRLNLQFFSFRRAANKIKYLAGSESGMAA
                     WISDTTPELIAQRFHELGPIDIAD"
     gene            27318..28568
                     /gene="galK"
                     /locus_tag="OU28_RS08415"
     CDS             27318..28568
                     /gene="galK"
                     /locus_tag="OU28_RS08415"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008783164.1"
                     /GO_function="GO:0004335 - galactokinase activity
                     [Evidence IEA]"
                     /GO_process="GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="WP_033510323.1"
                     /translation="MTSVEFIEPISHDDGVARATELFRATFGEEPAGVWAAPGRVNLI
                     GEHTDYNAGLCLPIALPHRTFLALKPREDTAVRLVSDVNPTAVAETELDGLKARGVDG
                     WAAYPTGVAWAMREAGFDQVRGFDAAFVSCVPLGSGLSSSAAMTCSTALALDDVYGLG
                     YGATDEGRVTLITMAIKSENDMAGASTGGLDQNASMRCTAGHAIRLDCMPGLSAVDSV
                     SQQEFDLDKYGLELLVVDTQAHHQLNDGQYEQRRRTCEQAAELLGYEHLRAVAEAVAY
                     STDPEGSLAAVLNCLNDETMKKRVRHVITEIGRVDEFVKAFAAGDIAESGRLFNASHD
                     SLRDDYEVTVPELDVAVDVARANGAYGARMTGGGFGGSIIALVDKGRSQEVAQLIADE
                     FEARGFHAPRALAAVASASASREA"
     gene            28908..29210
                     /locus_tag="OU28_RS08420"
     CDS             28908..29210
                     /locus_tag="OU28_RS08420"
                     /inference="COORDINATES: protein motif:HMM:NF016136.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
                     /protein_id="WP_033510324.1"
                     /translation="MAMVTARVDAERKREAEMVLKRHGLTYSDVIRDLTNYLADTGEL
                     PEFEQITLDLVRRREMERKLAIIEMFANAELPAVEGDWSDEEIVEQERLRKAGEPW"
     gene            29204..>29553
                     /locus_tag="OU28_RS08425"
     CDS             29204..>29553
                     /locus_tag="OU28_RS08425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012578130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="WP_033510325.1"
                     /translation="MVRLLFDTNILLDLCNVNRVPFHQDALDLLTRCVRRGDVEMMVC
                     VASLNDVYYVLRRHYGSERQARQYVGKLMELFDVRPLLPRHARRSLASDEPDFEDGLI
                     RAVAECSCTVKKQAT"
CONTIG      join(JDTM01000020.1:1..29553)
//
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