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Enterobacter sp. A103 Scaffold31, whole genome shotgun sequence

NCBI Reference Sequence: NZ_JAXQPQ010000031.1

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LOCUS       NZ_JAXQPQ010000031      1183 bp    DNA     linear   CON 21-DEC-2023
DEFINITION  Enterobacter sp. A103 Scaffold31, whole genome shotgun sequence.
ACCESSION   NZ_JAXQPQ010000031 NZ_JAXQPQ010000000
VERSION     NZ_JAXQPQ010000031.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMN38528082
            Assembly: GCF_034427535.1
KEYWORDS    WGS; RefSeq.
SOURCE      Enterobacter sp. A103
  ORGANISM  Enterobacter sp. A103
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Enterobacter.
REFERENCE   1  (bases 1 to 1183)
  AUTHORS   Lu,L.
  TITLE     Plant growth promoting bacteria from saline-alkali soil
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1183)
  AUTHORS   Lu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) College of Life Sciences, Northeast
            Forestry University, No. 26 Hexing Road, Harbin, Heilongjiang
            150040, China
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            JAXQPQ010000031.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 03-NOV-2023
            Assembly Method        :: SOAPdenovo v. 2.04
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 220.0x
            Sequencing Technology  :: Illumina
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 12/21/2023 04:38:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 4,614
            CDSs (total)                      :: 4,513
            Genes (coding)                    :: 4,429
            CDSs (with protein)               :: 4,429
            Genes (RNA)                       :: 101
            rRNAs                             :: 6, 4, 5 (5S, 16S, 23S)
            complete rRNAs                    :: 4 (5S)
            partial rRNAs                     :: 2, 4, 5 (5S, 16S, 23S)
            tRNAs                             :: 77
            ncRNAs                            :: 9
            Pseudo Genes (total)              :: 84
            CDSs (without protein)            :: 84
            Pseudo Genes (ambiguous residues) :: 0 of 84
            Pseudo Genes (frameshifted)       :: 42 of 84
            Pseudo Genes (incomplete)         :: 55 of 84
            Pseudo Genes (internal stop)      :: 13 of 84
            Pseudo Genes (multiple problems)  :: 22 of 84
            Pseudo Genes (short protein)      :: 1 of 84
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1183
                     /organism="Enterobacter sp. A103"
                     /mol_type="genomic DNA"
                     /submitter_seqid="Scaffold31"
                     /strain="A103"
                     /isolation_source="soil"
                     /host="Salix"
                     /db_xref="taxon:3102785"
                     /geo_loc_name="China: Anda"
                     /collection_date="2021-07-15"
     gene            <1..>1183
                     /locus_tag="SPH27_RS22995"
                     /old_locus_tag="SPH27_23000"
                     /pseudo
     CDS             <1..>1183
                     /locus_tag="SPH27_RS22995"
                     /old_locus_tag="SPH27_23000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008500123.1"
                     /note="incomplete; too short partial abutting assembly
                     gap; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Contact-dependent inhibition of growth factor
                     CdiA"
CONTIG      join(JAXQPQ010000031.1:1..1183)
//
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