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Staphylococcus aureus strain GKP138-6, whole genome shotgun sequence

NCBI Reference Sequence: NZ_FMPX01000030.1

FASTA Graphics 

LOCUS       NZ_FMPX01000030        20292 bp    DNA     linear   CON 06-DEC-2023
DEFINITION  Staphylococcus aureus strain GKP138-6, whole genome shotgun
            sequence.
ACCESSION   NZ_FMPX01000030 NZ_FMPX01000000
VERSION     NZ_FMPX01000030.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA1708859
            Assembly: GCF_900098135.1
KEYWORDS    WGS; RefSeq.
SOURCE      Staphylococcus aureus
  ORGANISM  Staphylococcus aureus
            Bacteria; Bacillati; Bacillota; Bacilli; Bacillales;
            Staphylococcaceae; Staphylococcus.
REFERENCE   1
  CONSRTM   Pathogen Informatics
  TITLE     Direct Submission
  JOURNAL   Submitted (28-SEP-2016) WTSI, Pathogen Informatics, Wellcome Trust
            Sanger Institute, CB10 1SA, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            FMPX01000030.1.
            The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Date                   :: 12/06/2023 02:59:13
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,850
            CDSs (total)                      :: 2,791
            Genes (coding)                    :: 2,705
            CDSs (with protein)               :: 2,705
            Genes (RNA)                       :: 59
            rRNAs                             :: 3, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 3, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 50
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 86
            CDSs (without protein)            :: 86
            Pseudo Genes (ambiguous residues) :: 0 of 86
            Pseudo Genes (frameshifted)       :: 46 of 86
            Pseudo Genes (incomplete)         :: 42 of 86
            Pseudo Genes (internal stop)      :: 18 of 86
            Pseudo Genes (multiple problems)  :: 17 of 86
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20292
                     /organism="Staphylococcus aureus"
                     /mol_type="genomic DNA"
                     /strain="GKP138-6"
                     /serovar="NA"
                     /isolation_source="Bulk milk"
                     /db_xref="taxon:1280"
                     /geo_loc_name="United Kingdom"
                     /collection_date="2012"
                     /note="contig: ERS189633SCcontig000030"
     gene            complement(<1..69)
                     /locus_tag="BJS49_RS13940"
     CDS             complement(<1..69)
                     /locus_tag="BJS49_RS13940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2951 family protein"
                     /protein_id="WP_141724529.1"
                     /translation="MFGFTKRHEQDWRLTRLEENDKT"
     gene            complement(110..283)
                     /locus_tag="BJS49_RS13945"
                     /old_locus_tag="SAMEA1708859_02639"
     CDS             complement(110..283)
                     /locus_tag="BJS49_RS13945"
                     /old_locus_tag="SAMEA1708859_02639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XkdX family protein"
                     /protein_id="WP_001790193.1"
                     /translation="MKMIYPTFKDIKTFYVWGCYKNEQIKWYVDMGVIDKEEYALITG
                     EKYPEAKDEKSQV"
     gene            complement(293..670)
                     /locus_tag="BJS49_RS13950"
                     /old_locus_tag="SAMEA1708859_02640"
     CDS             complement(293..670)
                     /locus_tag="BJS49_RS13950"
                     /old_locus_tag="SAMEA1708859_02640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2977 domain-containing protein"
                     /protein_id="WP_000705888.1"
                     /translation="MKITVNDKNEVIGFVNTGGLRNSLDVDDNNVPIKFKEEFEPRKF
                     VFTNGEIKYNSNFEKEDVPNASKQQSESDLSDEELRGMVASMQMQVTQVNILAMELKQ
                     QNAMLTQQLTELKAGKTNTEEDV"
     gene            complement(670..2493)
                     /locus_tag="BJS49_RS13955"
                     /old_locus_tag="SAMEA1708859_02641"
     CDS             complement(670..2493)
                     /locus_tag="BJS49_RS13955"
                     /old_locus_tag="SAMEA1708859_02641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate upper protein"
                     /protein_id="WP_000259600.1"
                     /translation="MVVDNFSKDDNLIELQTTSQYNPIIDTNISFYESDRGTGVLNFA
                     VTKNNRPLSISSEHVKTSIVLKTDDYNVDRGAYISDELTIVDAINGRLQYVIPNEFLK
                     HSGKVHAQAFFTQNGSNNVVVERQFSFNIENDLVSGFDGITKLVYIKSIQDTIEAVGK
                     DFNQLKQNMADTQTLIAKVNDSATKGIQQIEIKQNEAIQAITATQTSATQAVTAEFDK
                     IVEKEQAIFERVNEVEQQINGADLVKGNSTTNWQKSKLTDDYGKAIESSEQSIDSVLS
                     TVNTSRIIHITSATDAPSFKDIGTVDTPKEDGVDDGSDIPVAPNTLGKSGVLVVYVVD
                     DSTARATWYPDDSNDEYTKYKIYGTWYPFYKKNDGNLTKQFVEETSNNALNQAKQYVD
                     NKFGTTSWQQHKLTEPNGQSIQVNLNNAQGDLGYLTAGNYYATRVPDLPGSVESYEGY
                     LSVFVKDDTNKLFNFTPYNSKKIYTRSITNGRLEQQWTVPNEHKSTVLFDGGANGVGT
                     TINLTEPYTNYSILLVSGTYPGGVIEGFGLTALPNAIQLSKANVVDSDGNGGGIYECL
                     LSKTSSTTLRIDNDVYFDLGKTSGSGANANKVTITKIMGWK"
     gene            complement(2493..4391)
                     /locus_tag="BJS49_RS13960"
                     /old_locus_tag="SAMEA1708859_02642"
     CDS             complement(2493..4391)
                     /locus_tag="BJS49_RS13960"
                     /old_locus_tag="SAMEA1708859_02642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_500525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_070028423.1"
                     /translation="MAYGLITSLHSITGEKVVAQHEYNYRLLDNGMSKLEKMFIYHQK
                     EEIYAHSAKQIKYLNDSVEDYLTYLNGRFSNMIIGHNGDGINEVKDARVDNTGYDHKT
                     LQDRLYHDYSTLDAFTKKVEKAVDEHYKEYQATEYRFEPKEQEPEFITDLSPYTNAVM
                     QSFWVDPRTKIIYMTQARPGNHYMLSRLKPNGQFIDRLLVKNGGHGTHSAYRYIGNEL
                     WIYSAVLDANNNNKFVRFKYRSGEMTYGNEMQDVMPNVFNDRYTSAIYNPIENLMVFR
                     REYKTSEQQAKNALNFVEVRSADDIDKGIDKVLYQMDIPMQYTSGTQPMQGIAYDAGI
                     LYWYTGDSNPANPNYLQGFDIKTKELLFKRRIDIGGVNNNFKGDFQEAEGLDMYYDLE
                     TGRKALLIGVTIGPGNNRHHSIYSIGQRGVNQFLKNIAPQVSMTDSGGRVKPLPIQNP
                     AYLSDITEVGHYYIYTQDTQNALDFPLPKAFRDAGWFFDVLPGHYNGALRQVLTRNST
                     GRNMLKFERVIDIFNKKNNGAWNFCPQNAGYWEHIPKSITKLSDLKIVGLDFYITTEE
                     SKRFTDFPKDFKGIAGWILEVKSNTPGNTTQVLRRNNFPSAHQFLVRNFGTGGVGKWS
                     LFEGKVVE"
     gene            complement(4404..6290)
                     /locus_tag="BJS49_RS13965"
                     /old_locus_tag="SAMEA1708859_02643"
     CDS             complement(4404..6290)
                     /locus_tag="BJS49_RS13965"
                     /old_locus_tag="SAMEA1708859_02643"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001144711.1"
                     /GO_function="GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="WP_001144700.1"
                     /translation="MPVLLKSLQGVGHAIHVNTKLNEKLNEDSTLDIDMIENASTFDA
                     IGAITKMWTITNIKGEDDLNEYVIVMLDKSTIGNKIKLSIKARQKELDDLNNSRIYQE
                     YNESFTGVEFFNTVFKGTSYKYVLHTKVDASKFEGLGKGDTRLEIFKKGLERYHLEYE
                     YDAKTKTFHLYDELSKVANYYIKSGVNADNVKIQEDASKCYTYIRGYGDFDGQQTFTE
                     AGLQFEFTHPLAQLIGKREAPPLIDGRIKKEDVLKKSMELVIKKSVTASISLDFVAQP
                     EHFPEAKPRIGDVVRVAEPTIGYNDLVRIVEITTHRDAYNNIIKQDVVLGDFTMRDRY
                     RKAIHEATNYVKNVKTTKSDPAKYLRELNAKVNASLSINNELVKQNEKINAKVDKMST
                     KTVTTANGTIMYDFTSQSSIRNIKSIGTIGDSVARGSHAKTNFTEMLGKKLKAKTTNL
                     ARGGATMATVPIGKEAVENSIFRQAEQIRGDLIILQGTDDDWLHDYWAGVPIGTDKTD
                     TKTFYGAFCSAIEVIRKNNPDSKILVMTATRQCPMSGTTIRRKDTDKNKLGLTLEDYV
                     NAQILACSELDVPVFDAYHTDYFKPYNPAFRKASMEDGLHPNEKGHEVIMYELIKDYY
                     SFYD"
     gene            complement(6301..7236)
                     /locus_tag="BJS49_RS13970"
                     /old_locus_tag="SAMEA1708859_02644"
     CDS             complement(6301..7236)
                     /locus_tag="BJS49_RS13970"
                     /old_locus_tag="SAMEA1708859_02644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001604155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail domain-containing protein"
                     /protein_id="WP_000560198.1"
                     /translation="MIAHDVEIIKNGVKYRVSDNPHTYKHLRVLDYNVIGSGYKRNYS
                     PLDGVDGRFHNYAKEEYKKVELRLRYEVPKIAYASHLKSDIQTLFYGRFYLRELATPD
                     NTIKFENMFEPLEQEFELDYVDGRQLFVGLVSEVSFDTTKTSGEITLTFETTELPFFE
                     SIGYSTDLESDNDLEKWSVPDRIALNENDRSRQMTFYNTSSGDVYYNGDVALTQFNQF
                     NVVEIELAEDVKADDKDGFTFYMDKGNISVIKDVDLKAGDKIIFDNKHTYRGNLNIDL
                     YNKTLEQPVLYPGWNHFKANRLMKKIVFRHKLYYR"
     gene            complement(7251..10337)
                     /locus_tag="BJS49_RS13975"
                     /old_locus_tag="SAMEA1708859_02645"
     CDS             complement(7251..10337)
                     /locus_tag="BJS49_RS13975"
                     /old_locus_tag="SAMEA1708859_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001834821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase"
                     /protein_id="WP_070028432.1"
                     /translation="MRTAQRMAKTDIPDEIKTEVTANIRDYQRELTRAKSMAQRWRGH
                     SVKLFMKTDEYKANLERAKAQVERFKQHKVDLKLSNTELMAKYNATKATVEAWRKHVV
                     KLDLDANPAKMAVKGFKEDLIDLSRHSFDVDSSRWKLGNKFTKEFNEVEGAVKRSFGR
                     IGQIMRKEVNGTSDIWGKLNNSLKDYGEKMDALATKIRTFGTIFAQQVKGLMIASIQA
                     LIPVIAGLVPAIMAVLNAVGVLGGGVIGLAGAFSVAGVGAVGFGAMAVTALKMVKDGT
                     LAVTKEVQNFRNASDQLKTTWQGIVKENQASIFNAMSAGIRGVTSAMSQLKPFLSEVS
                     MLVEANARKFEDWVKHSETAKKAFEALNSVGGAIFGDLLNAAGRFGDGLFNIFTQLMP
                     LFKFMSQGLQNMSIAFQNWANSVAGQNAIKAFIDYTTTNLPKIGQIFGNVFAGIGNLM
                     IAFAQNSSNIFDWLVKLTSQFRAWSEQVGQSQGFKDFISYVQENGPTIMQLIGNIVKA
                     LVAFGTAMAPIASKLLDFITNLAGFIAKLFETHPAVAQIIGVMGILGGAFWALMAPIV
                     AISSVLTNVFGLSLFSVVKKILSFIRTSSLVTGAMEALTGVFGTISAPILAVIAVIGA
                     FIGVLVYLWKTNENFRNTITEAWNGVKTAVSGAIQGVVGWLTELWGKIQSTLQPIMPI
                     LQVLGQIFMQVLGVLVIGIITNVMNIIQGLWTLITIAFQAIGTVISVAVQIIVGLFTA
                     LIQLLTGDFSGAWETIKTTITNVLDTIWQYMQSVWESIIGFLTGVMNRTLSMFGTSWS
                     QIWSTITNFVSSIWNTVTSWFSRVASSVAEKMGQALNFIITKGSEWVSNIWNTVTSFA
                     SKVADGFKRVVSNVGDGMKNALDKIKSFFSDFLNAGAELIGKVAEGVANAAHKVVSAV
                     GDAISSAWDSVTSFVSGHGGGSGLGKGLAVSQAKVMATSFGKTFTSELGSTLTDGFND
                     SLTPSVDGHMTNDVQHSMKENNRPIVNVTVRNEGDLNMIKSHIDDMDAKDGSFNLM"
     gene            complement(10397..10738)
                     /locus_tag="BJS49_RS13980"
                     /old_locus_tag="SAMEA1708859_02646"
     CDS             complement(10397..10738)
                     /locus_tag="BJS49_RS13980"
                     /old_locus_tag="SAMEA1708859_02646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015978311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_049948777.1"
                     /translation="MTSRYIGYMSNDELMSMLPAEWNDWIVGARQALIDQRDIALYGA
                     QYNAVAQAGKSLKRFVRQNEREHYIIRGQEDEYERMKQRELAKNKRKREIQKQGTRKF
                     LNSLKTSHKGG"
     gene            complement(10759..11253)
                     /locus_tag="BJS49_RS13985"
                     /old_locus_tag="SAMEA1708859_02647"
     CDS             complement(10759..11253)
                     /locus_tag="BJS49_RS13985"
                     /old_locus_tag="SAMEA1708859_02647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000141081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly chaperone"
                     /protein_id="WP_015978362.1"
                     /translation="MTETTFNPITSLTINNEEVKAKATFMFDKTAKKFATEQEDNKGR
                     KQTISGFTNVYNALLERDTVAIVDFWECATAYLGKSAPKRENIEAEIMEIIERENDTL
                     NLLQGALDVMNNSGFFKQKSRLFWTQMNQAPSLAKEDEKEGAKAGIEMMKNNYKEIMT
                     VAPY"
     gene            complement(11314..11874)
                     /locus_tag="BJS49_RS13990"
                     /old_locus_tag="SAMEA1708859_02648"
     CDS             complement(11314..11874)
                     /locus_tag="BJS49_RS13990"
                     /old_locus_tag="SAMEA1708859_02648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001606768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_000046067.1"
                     /translation="MAQDKYIVALQIADKDLAKKLTIEEATLLGSLAEGGHTISNDLA
                     EIIQGGKKDYSRNSVEEEIKLTLDVVPGDKGQLALKESVKQFKQLRVWIWETKKRDGK
                     HHGVFAYVVIEEHEWSFDDEDNKIEITAKVKFNSADGTINDLPKEWLNPSALAPVVEF
                     EDMNAYEDSYENRTKKTTAGSSDLSM"
     gene            complement(11861..12298)
                     /locus_tag="BJS49_RS13995"
                     /old_locus_tag="SAMEA1708859_02649"
     CDS             complement(11861..12298)
                     /locus_tag="BJS49_RS13995"
                     /old_locus_tag="SAMEA1708859_02649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000270194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3168 domain-containing protein"
                     /protein_id="WP_000270196.1"
                     /translation="MWVSVERYLFNKVYNKLKSNPIIQKQLDGRVFDCVQKDAVYPYI
                     VVGETNVTNKETTTSMVEDVGITLHVYSQARNRDEASQIIQFLGFVLNNEIEIDYYSF
                     IKSRIDTQEVITDIDQYTKHGIIRLVFKYRHNTLQRSVTNGAG"
     gene            complement(12311..12724)
                     /locus_tag="BJS49_RS14000"
                     /old_locus_tag="SAMEA1708859_02650"
     CDS             complement(12311..12724)
                     /locus_tag="BJS49_RS14000"
                     /old_locus_tag="SAMEA1708859_02650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002480803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97-gp10 family putative phage morphogenesis
                     protein"
                     /protein_id="WP_015978370.1"
                     /translation="MAKVKYGNWDLVKELENYERDIERWVKRGIAKTTVKIHNTIISL
                     MPVDTGYLRESVTMDFKDGGFTGVINIGSEYAIYVNYGTGIYATGAGGSRAKKIPWSY
                     KDANGKWHTTKGQHAQPFWEPAIDAGRVFFNKYFS"
     gene            complement(12711..13046)
                     /locus_tag="BJS49_RS14005"
                     /old_locus_tag="SAMEA1708859_02651"
     CDS             complement(12711..13046)
                     /locus_tag="BJS49_RS14005"
                     /old_locus_tag="SAMEA1708859_02651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000482988.1"
                     /GO_component="GO:0044423 - virion component [Evidence
                     IEA]"
                     /GO_function="GO:0005198 - structural molecule activity
                     [Evidence IEA]"
                     /GO_process="GO:0019068 - virion assembly [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head closure protein"
                     /protein_id="WP_015978367.1"
                     /translation="MFNPFDEFPHTIEIGEVEVVGTYPKEYERFKSKETIKGFMDTPT
                     SSETLKFHQMSKDFDRNLYTPYHIPITNKTLFNYEGKTYEVVGEPVDQGGQHEINLTR
                     LRVRLIGKG"
     gene            complement(13039..13353)
                     /locus_tag="BJS49_RS14010"
                     /old_locus_tag="SAMEA1708859_02652"
     CDS             complement(13039..13353)
                     /locus_tag="BJS49_RS14010"
                     /old_locus_tag="SAMEA1708859_02652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015978403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head-tail connector protein"
                     /protein_id="WP_015978368.1"
                     /translation="MDTKDVKMINGLSLNDSSNDEQIEYLIEEYKSVAEDYCNQKFDD
                     KAVPSGVKKFIAECIKFGTTGNISARTMGTVSYTYITDIPSSAYAYLMPYRKLSWGKR
                     YV"
     gene            complement(13353..13679)
                     /locus_tag="BJS49_RS14015"
                     /old_locus_tag="SAMEA1708859_02653"
     CDS             complement(13353..13679)
                     /locus_tag="BJS49_RS14015"
                     /old_locus_tag="SAMEA1708859_02653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000278804.1"
                     /GO_process="GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rho termination factor N-terminal
                     domain-containing protein"
                     /protein_id="WP_000278937.1"
                     /translation="MYKVVEYFEDAQDNRHPYHEGDIYPRDGLEVSEERLAELSTTNN
                     CREIIGIKLVEDEQTEQSETNADEQKSLSDMKVTELKELAKKRGIKGYSDMKKDELIK
                     VLVGVK"
     gene            complement(13696..14655)
                     /locus_tag="BJS49_RS14020"
                     /old_locus_tag="SAMEA1708859_02654"
     CDS             complement(13696..14655)
                     /locus_tag="BJS49_RS14020"
                     /old_locus_tag="SAMEA1708859_02654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001044072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_001044072.1"
                     /translation="MNKTIKNATGMLKLNLQHFANKSVEPGQTLLKNKHVGILERVTA
                     VNAYSTPALISNDAIFMEGRSFTVMKGDTTELKDYKRNATNEFDHPKIEETTYFLDQE
                     KYWGRFVDALDRKDTEGNIDINYVVARQGAEVVAPYLDNLRFATLARNKAKHLTVGTG
                     SDAQYDAVLDVSVELDEIKAPENRVLFVSPTFYKGIKKFVIALPQGDTRQQVLGKGVQ
                     GELDGFVIVKVPTKLLQGLQAIAVVGEVLASPIQADLAKTNSNIPGMFGTLAEQLLYT
                     GAFVPEHLQKYIFTIGGTEVATKRDGVDAHADNVAKPSGSLEM"
     gene            complement(14667..15191)
                     /locus_tag="BJS49_RS14025"
                     /old_locus_tag="SAMEA1708859_02655"
     CDS             complement(14667..15191)
                     /locus_tag="BJS49_RS14025"
                     /old_locus_tag="SAMEA1708859_02655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000366930.1"
                     /GO_process="GO:0019069 - viral capsid assembly [Evidence
                     IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage scaffolding protein"
                     /protein_id="WP_070028425.1"
                     /translation="MDLYTLLGQFKDGEIDKQKVIDAIDESKSGMVPRSRLNDKNTEI
                     EELKEEISKRDEQIVELKDSVKDESELQKALEEEQNKNAELETKYKDLQLNSAVKLAV
                     NHEANDADDILTFINKDELELADDGTVKGLDEAIGTLKESKPYLFAPSKPTGNTPQDG
                     GPPSPHEAWTEFLN"
     gene            complement(15289..16269)
                     /locus_tag="BJS49_RS14030"
                     /old_locus_tag="SAMEA1708859_02656"
     CDS             complement(15289..16269)
                     /locus_tag="BJS49_RS14030"
                     /old_locus_tag="SAMEA1708859_02656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001795666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="WP_015978380.1"
                     /translation="MTEVLTVPNNKKDLTIKNQNDIDEYIDNLISKAEKPIEQLFANR
                     LKEIKQIIADMFEKYQSDDVYVTWTEFNKYNRLNKELTRIGTMLTDDYRQVAKMIQKS
                     QEDAYIEKFLMSLYLYETASQTSMQFDVPSKEVITSAIEQPIEFIRLVPTLQKHRDEV
                     LKKIRLHITQGIMSGEGYSKIAKAIRDDIGMSKAQSLRVARTEAGRAMSQAGLDSALV
                     AQKNGLQMYKYWQATKDTRTRDTHRHLDGAKKRIDEPFKSSGCVGQAPKLFVGVNSAK
                     ENINCRCKLMYYIDEDDLPSTTRARKDDGTTEVIPQMTYREWEKYKRKRK"
     gene            complement(16208..17626)
                     /locus_tag="BJS49_RS14035"
                     /old_locus_tag="SAMEA1708859_02657"
     CDS             complement(16208..17626)
                     /locus_tag="BJS49_RS14035"
                     /old_locus_tag="SAMEA1708859_02657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001573866.1"
                     /GO_component="GO:0046798 - viral portal complex [Evidence
                     IEA]"
                     /GO_function="GO:0005198 - structural molecule activity
                     [Evidence IEA]"
                     /GO_process="GO:0051027 - DNA transport [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="WP_001573866.1"
                     /translation="MYPSQPTQTEIFDAIVRTNNKPETLEEMIVRYIKQHLEKLPEIS
                     IGQEYYEQRPDIVKEPKPVDATGAVDPLKPDDRMITNFHANLVDQKVSYIVGKPIAFK
                     HTDDEVVKRIDEVLGNRFDDKLHSVLTGASNKGIEWLHPYLDEEGEFKLFRVPAEQGI
                     PIWTDKEHEELEAFIRMYKLENETKVEYWDKVTVNYYVYENGSLIPDYSNNLENSKTH
                     FSTGSWGKIPFIPFKNNDLEISDIFMYKTLIDAYNRRLSDLSNTFKDSNELTYVLKNY
                     DDQELPEFKRLLRYYGAIKVSDNGGVDTIQVEVPVENSKKYLDELYQKIMLFGQAVDF
                     SSDKFGSAPSGVALEFLYTNLNLKADKLARKAKVAIQELLWFVFEHFDIKGEHKDVDI
                     SFNYNKVANTELQVQTAQQSMGIVSHETVLENHPFVEDLQAELERIEQEQMEYNKQLP
                     NLDDGGADSAQQQERSNNKESE"
     gene            complement(17640..18848)
                     /locus_tag="BJS49_RS14040"
                     /old_locus_tag="SAMEA1708859_02658"
     CDS             complement(17640..18848)
                     /locus_tag="BJS49_RS14040"
                     /old_locus_tag="SAMEA1708859_02658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001606760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBSX family phage terminase large subunit"
                     /protein_id="WP_001573864.1"
                     /translation="MINEMLNPKQQEIWNCFINDKPKVLIASGAKRAGKTYVFILLFL
                     MHIATYKDKGLNFIIGGATQASIRRNILDDMELILGRELTLDKSNAVKIFGNKVYVFD
                     GQNSDAWKKARGFTSAGAFLNEGTALHNMFIKEVFSRCSHKGARILIDTNPENPMHPV
                     KKDYIDKSGQRLSNGRLNIKAFQFTLFDNTFLDEEYIESIIASTPTGMFTDRDIYGKW
                     VSAEGVVYKDFKEKVHYITEEEFKTKQIKRKYAGVDWGYEHYGSIMVVAEDFDGNKYV
                     IEEHAHRHKEIDDWVAIAKGVIKRHGDILFYCDTARPEHIERFRREKIKARYADKAVI
                     AGIEVISRLFKLNKIFIIKEKVSLFKEEIYNYVWKDNADEPVKLNDDTLDALRYAVYT
                     ANKPSGTGFN"
     gene            complement(18841..19335)
                     /locus_tag="BJS49_RS14045"
                     /old_locus_tag="SAMEA1708859_02659"
     CDS             complement(18841..19335)
                     /locus_tag="BJS49_RS14045"
                     /old_locus_tag="SAMEA1708859_02659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000594083.1"
                     /GO_process="GO:0051276 - chromosome organization
                     [Evidence IEA]"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="WP_070028427.1"
                     /translation="MIKLTPKQEKFVLGLIEGKSQRKAYIDAGYSTKGKSDNYIDSRA
                     FELSKNSAVLDRYEELRQEAAEQSKWTRQKAFEEYEWLKNTAKNDIEVEGVKKATADA
                     FLASLDGMNRMTLGNEVLTNKKIETEIKMLEKKIDQMDKTENNSQEAEVAKALIKLAG
                     VNND"
     gene            complement(19681..20082)
                     /locus_tag="BJS49_RS14050"
                     /old_locus_tag="SAMEA1708859_02660"
     CDS             complement(19681..20082)
                     /locus_tag="BJS49_RS14050"
                     /old_locus_tag="SAMEA1708859_02660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000286967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="WP_000286968.1"
                     /translation="MYSKESIVNMIGTHKMKCNVLADVIPEYDSNSIAQYGIQATLPK
                     PQGENSSKVEDVVVRLERANKRYAQMLKEVEFINQSQQRLGHVDFCFLELLKKGYNRD
                     AIIKKMPNSKLNRNNFLARRDELAEKIYLLQ"
     gene            complement(20083..20256)
                     /locus_tag="BJS49_RS14055"
                     /old_locus_tag="SAMEA1708859_02661"
     CDS             complement(20083..20256)
                     /locus_tag="BJS49_RS14055"
                     /old_locus_tag="SAMEA1708859_02661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000595244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional activator RinB"
                     /protein_id="WP_029265324.1"
                     /translation="MIKQILRLIFLLAMYELGKYVTEQVYIMMTANDDVEEPSDFAKL
                     SDQCDLMRAEVSE"
CONTIG      join(FMPX01000030.1:1..20292)
//
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