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NCBI Reference Sequence: NZ_CAYAKP010000026.1
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LOCUS NZ_CAYAKP010000026 934 bp DNA linear CON 28-NOV-2024 DEFINITION Klebsiella pneumoniae strain Kpn02076 isolate Kpn02076 Kpn02076-200721_contig_26, whole genome shotgun sequence. ACCESSION NZ_CAYAKP010000026 NZ_CAYAKP010000000 VERSION NZ_CAYAKP010000026.1 DBLINK BioProject: PRJNA224116 BioSample: SAMEA116319086 Assembly: GCF_964302925.1 KEYWORDS WGS; RefSeq. SOURCE Klebsiella pneumoniae ORGANISM Klebsiella pneumoniae Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella/Raoultella group; Klebsiella; Klebsiella pneumoniae complex. REFERENCE 1 (bases 1 to 934) AUTHORS Reuter,S. TITLE Direct Submission JOURNAL Submitted (27-OCT-2024) Universitaetsklinikum Freiburg, Institute for infection prevention and control, Breisacher Strasse 115B, 79106 Freiburg, Germany COMMENT REFSEQ INFORMATION: The reference sequence is identical to CAYAKP010000026.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_964302925.1-RS_2024_11_28 Annotation Date :: 11/28/2024 00:07:59 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.9 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 5,078 CDSs (total) :: 4,971 Genes (coding) :: 4,887 CDSs (with protein) :: 4,887 Genes (RNA) :: 107 rRNAs :: 5, 4, 4 (5S, 16S, 23S) complete rRNAs :: 5 (5S) partial rRNAs :: 4, 4 (16S, 23S) tRNAs :: 79 ncRNAs :: 15 Pseudo Genes (total) :: 84 CDSs (without protein) :: 84 Pseudo Genes (ambiguous residues) :: 0 of 84 Pseudo Genes (frameshifted) :: 46 of 84 Pseudo Genes (incomplete) :: 38 of 84 Pseudo Genes (internal stop) :: 15 of 84 Pseudo Genes (multiple problems) :: 12 of 84 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..934 /organism="Klebsiella pneumoniae" /mol_type="genomic DNA" /submitter_seqid="Kpn02076-200721_contig_26" /strain="Kpn02076" /isolate="Kpn02076" /db_xref="taxon:573" /note="contig: Kpn02076-200721_contig_26" gene complement(<1..480) /locus_tag="ACJ14U_RS25365" rRNA complement(<1..480) /locus_tag="ACJ14U_RS25365" /product="23S ribosomal RNA" /inference="COORDINATES: nucleotide motif:Rfam:14.4:RF02541" /inference="COORDINATES: profile:INFERNAL:1.1.5" /note="Derived by automated computational analysis using gene prediction method: cmsearch." /db_xref="RFAM:RF02541" gene complement(671..746) /locus_tag="ACJ14U_RS25370" tRNA complement(671..746) /locus_tag="ACJ14U_RS25370" /product="tRNA-Glu" /inference="COORDINATES: profile:tRNAscan-SE:2.0.12" /note="Derived by automated computational analysis using gene prediction method: tRNAscan-SE." /anticodon=(pos:complement(710..712),aa:Glu,seq:ttc) gene complement(832..>934) /locus_tag="ACJ14U_RS25375" rRNA complement(832..>934) /locus_tag="ACJ14U_RS25375" /product="16S ribosomal RNA" /inference="COORDINATES: nucleotide motif:Rfam:14.4:RF00177" /inference="COORDINATES: profile:INFERNAL:1.1.5" /note="Derived by automated computational analysis using gene prediction method: cmsearch." /db_xref="RFAM:RF00177" CONTIG join(CAYAKP010000026.1:1..934) //
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