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Serratia sp. PL4 isolate plastics_colonisation_sample_133, whole genome shotgun sequencing project

NCBI Reference Sequence: NZ_CAMFJC000000000.1

  • This entry is the master record for a whole genome shotgun sequencing project and contains no sequence data.

LOCUS       NZ_CAMFJC010000000   5218760 bp    DNA     linear   BCT 27-DEC-2024
DEFINITION  Serratia sp. PL4 isolate plastics_colonisation_sample_133, whole
            genome shotgun sequencing project.
ACCESSION   NZ_CAMFJC000000000
VERSION     NZ_CAMFJC000000000.1
DBLINK      BioProject: PRJNA224116
            BioSample: SAMEA110407940
            Assembly: GCF_945956885.1
KEYWORDS    WGS; RefSeq.
SOURCE      Serratia sp. PL4
  ORGANISM  Serratia sp. PL4
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Yersiniaceae; Serratia.
REFERENCE   1  (bases 1 to 5218760)
  AUTHORS   Padfield,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JUL-2022) UNIVERSITY OF EXETER, Environment and
            Sustainability Institute, University of Exeter, Tremough Campus,
            Penryn, Cornwall, TR10 9EZ, United Kingdom
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CAMFJC000000000.1.
            The Serratia sp. PL4 whole genome shotgun (WGS) project has the
            project accession NZ_CAMFJC000000000.  This version of the project
            (01) has the accession number NZ_CAMFJC010000000, and consists of
            sequences CAMFJC010000001-CAMFJC010000030.
            isolate_13.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI RefSeq
            Annotation Name                   :: GCF_945956885.1-RS_2024_12_27
            Annotation Date                   :: 12/27/2024 03:43:31
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.9
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 5,001
            CDSs (total)                      :: 4,901
            Genes (coding)                    :: 4,868
            CDSs (with protein)               :: 4,868
            Genes (RNA)                       :: 100
            rRNAs                             :: 2, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (5S)
            tRNAs                             :: 81
            ncRNAs                            :: 15
            Pseudo Genes (total)              :: 34
            CDSs (without protein)            :: 33
            Pseudo Genes (ambiguous residues) :: 0 of 34
            Pseudo Genes (frameshifted)       :: 11 of 34
            Pseudo Genes (incomplete)         :: 18 of 34
            Pseudo Genes (internal stop)      :: 9 of 34
            Pseudo Genes (multiple problems)  :: 4 of 34
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5218760
                     /organism="Serratia sp. PL4"
                     /mol_type="genomic DNA"
                     /isolate="plastics_colonisation_sample_133"
                     /db_xref="taxon:2952198"
WGS         CAMFJC010000001-CAMFJC010000030
WGS_SCAFLD  NZ_CAMFJC010000001-NZ_CAMFJC010000030
//
Feature
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