U.S. flag

An official website of the United States government

Arabidopsis thaliana glycerol kinase (AT4G38225), mRNA

NCBI Reference Sequence: NM_202976.3

FASTA Graphics 

LOCUS       NM_202976               1249 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana glycerol kinase (AT4G38225), mRNA.
ACCESSION   NM_202976
VERSION     NM_202976.3
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 1249)
  AUTHORS   Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
            Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
            Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
            Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
            Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
            Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
            Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
            Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
            Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
            Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
            Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
            Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
            Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
            Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
            Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
            Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
            Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
            Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
            Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
            Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
            Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
            Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
            Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
            Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
            Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
            Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
            Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
            Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
            Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
            Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
            Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
            Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
            Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
            Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
            Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
            Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
            Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
            Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
            Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
            Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
            Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
            Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
            Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
            Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
            Martienssen,R. and McCombie,W.R.
  TITLE     Sequence and analysis of chromosome 4 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 769-777 (1999)
   PUBMED   10617198
REFERENCE   2  (bases 1 to 1249)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1249)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 1249)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003075).
            
            On Apr 24, 2008 this sequence version replaced NM_202976.2.
FEATURES             Location/Qualifiers
     source          1..1249
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="4"
                     /ecotype="Columbia"
     gene            1..1249
                     /locus_tag="AT4G38225"
                     /db_xref="Araport:AT4G38225"
                     /db_xref="GeneID:829979"
                     /db_xref="TAIR:AT4G38225"
     CDS             33..1130
                     /locus_tag="AT4G38225"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EL088565.1,INSD:DR262694.1,INSD:CB258803.1,
                     INSD:DR225808.1,INSD:DR225812.1,INSD:DR225805.1,
                     INSD:EL333310.1,INSD:BX837249.1,INSD:EH896735.1,
                     INSD:DR225810.1,INSD:EL208436.1,INSD:CB258795.1,
                     INSD:DR262695.1,INSD:DR225813.1,INSD:AV527226.1,
                     INSD:BP817339.1,INSD:DR225811.1,INSD:EH932957.1,
                     INSD:DR225809.1,INSD:CB264048.1,INSD:BP812568.1,
                     INSD:DR225806.1,INSD:EL168588.1,INSD:AV822042.1,
                     INSD:EH895195.1,INSD:DR262696.1,INSD:AV525000.1,
                     INSD:DR225807.1,INSD:AV828249.1,INSD:ES162717.1,
                     INSD:EL202152.1,INSD:EH872306.1,INSD:BE526225.1,
                     INSD:EL211680.1,INSD:DR225814.1,INSD:EL115886.1,
                     INSD:EL094448.1,INSD:BP842601.1"
                     /inference="Similar to RNA sequence, mRNA:INSD:BX826512.1"
                     /note="unknown protein; FUNCTIONS IN: molecular_function
                     unknown; INVOLVED IN: biological_process unknown; LOCATED
                     IN: chloroplast; EXPRESSED IN: 21 plant structures;
                     EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits
                     to 34131 proteins in 2444 species: Archae - 798; Bacteria
                     - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
                     - 0; Other Eukaryotes - 9610 (source: NCBI BLink)."
                     /codon_start=1
                     /product="glycerol kinase"
                     /protein_id="NP_974705.1"
                     /db_xref="GeneID:829979"
                     /db_xref="TAIR:AT4G38225"
                     /db_xref="Araport:AT4G38225"
                     /translation="MLSSSGSSLLWRSRTHVPAPPPRSSPPLKALSFPFSSSLWFIHR
                     TTISPLSCSAESSSEIALAQSQPAPDFNPWSEFAQNVSGEWDGFGADFTCEGQPLELP
                     ESVVPEAFREWEVKVFDWQTQCPTLAQPNSLSFLYKSIKLLPTVGCEADAATRYSIDQ
                     RIIGGGKSSALAFSYSVTGSYVAVWPLRNNQLEVEHCLINPKDKESRVRIFQVVSLAE
                     TTNMSLQSVKVFCEQWYGPFRDGDQLGGCAIRSSGFAATPTTAASVVTGSWRVLLATT
                     SFHASDFGCIQQVTGEKVIEIVREENDLLLLPQELWCSLQQGKDRERVFSVGWVFEPG
                     HAITSSCVFSSDSKLKEVTMGRETALSDSLC"
ORIGIN      
        1 ttcgttcgtg actctctctg ctctgctccc aaatgttatc gtcctccgga agctccctct
       61 tatggcggag ccgtacacat gtgcctgcac cgccgcctcg gtcttcgcca ccgcttaaag
      121 ctctctcctt tcccttctct tccagtttat ggtttattca cagaaccaca atttctcctc
      181 tttcgtgttc agctgaaagt tcctcggaga ttgccctggc gcagagccag cctgcccctg
      241 atttcaatcc ctggtcggag ttcgctcaaa atgtgtctgg cgaatgggac ggtttcggag
      301 cagattttac atgcgaaggg caaccgctag aactacctga atcagtggtt ccagaagcct
      361 ttagagaatg ggaagtgaag gtgttcgatt ggcagacgca gtgtcccact cttgcccagc
      421 ccaactcact atcctttctt tacaagtcca tcaaactcct ccccaccgtt ggatgtgaag
      481 ctgatgcagc cacccgttac agcatcgacc agaggatcat cgggggaggc aaatcctctg
      541 cattagcctt ttcgtattct gtcactggct cctatgtcgc tgtgtggcct ttgcggaaca
      601 accagcttga ggtggagcat tgtctgatca atccaaagga caaggagtct cgtgtgagga
      661 ttttccaggt tgtcagctta gcagagacca ccaacatgtc cttgcagagt gtcaaagttt
      721 tctgtgagca gtggtacggt ccgttcagag atggcgatca gcttggaggc tgtgccatcc
      781 gtagctccgg ctttgctgct acacctacca ctgcagcttc agtggttacc ggttcttgga
      841 gagttctact tgctaccact agctttcacg cctctgattt cggttgtata caacaagtta
      901 ctggcgagaa ggtgattgag attgtgagag aagaaaatga tcttttattg cttccgcaag
      961 agctgtggtg ctcactccaa caaggcaaag accgcgaaag agtattttca gtaggatggg
     1021 tctttgagcc aggccatgct atcacatcca gctgcgtctt ctctagcgat tctaagctaa
     1081 aggaggtaac aatggggaga gagactgctc tatcagatag cctttgttga ttcaatcttt
     1141 accgggaagg atccagacca tgggaaccat atttctgcag agctttgtag cttttgcata
     1201 tcttcgttca gctctatcaa aaacgactgt ttcacgtaca ccgatgtat
//
Feature
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

Reference sequence information

More about the AT4G38225 gene

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.