LOCUS NM_202976 1249 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana glycerol kinase (AT4G38225), mRNA.
ACCESSION NM_202976
VERSION NM_202976.3
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 1249)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (bases 1 to 1249)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1249)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 1249)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003075).
On Apr 24, 2008 this sequence version replaced NM_202976.2.
FEATURES Location/Qualifiers
source 1..1249
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
gene 1..1249
/locus_tag="AT4G38225"
/db_xref="Araport:AT4G38225"
/db_xref="GeneID:829979"
/db_xref="TAIR:AT4G38225"
CDS 33..1130
/locus_tag="AT4G38225"
/inference="Similar to RNA sequence,
EST:INSD:EL088565.1,INSD:DR262694.1,INSD:CB258803.1,
INSD:DR225808.1,INSD:DR225812.1,INSD:DR225805.1,
INSD:EL333310.1,INSD:BX837249.1,INSD:EH896735.1,
INSD:DR225810.1,INSD:EL208436.1,INSD:CB258795.1,
INSD:DR262695.1,INSD:DR225813.1,INSD:AV527226.1,
INSD:BP817339.1,INSD:DR225811.1,INSD:EH932957.1,
INSD:DR225809.1,INSD:CB264048.1,INSD:BP812568.1,
INSD:DR225806.1,INSD:EL168588.1,INSD:AV822042.1,
INSD:EH895195.1,INSD:DR262696.1,INSD:AV525000.1,
INSD:DR225807.1,INSD:AV828249.1,INSD:ES162717.1,
INSD:EL202152.1,INSD:EH872306.1,INSD:BE526225.1,
INSD:EL211680.1,INSD:DR225814.1,INSD:EL115886.1,
INSD:EL094448.1,INSD:BP842601.1"
/inference="Similar to RNA sequence, mRNA:INSD:BX826512.1"
/note="unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED
IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits
to 34131 proteins in 2444 species: Archae - 798; Bacteria
- 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink)."
/codon_start=1
/product="glycerol kinase"
/protein_id="NP_974705.1"
/db_xref="GeneID:829979"
/db_xref="TAIR:AT4G38225"
/db_xref="Araport:AT4G38225"
/translation="MLSSSGSSLLWRSRTHVPAPPPRSSPPLKALSFPFSSSLWFIHR
TTISPLSCSAESSSEIALAQSQPAPDFNPWSEFAQNVSGEWDGFGADFTCEGQPLELP
ESVVPEAFREWEVKVFDWQTQCPTLAQPNSLSFLYKSIKLLPTVGCEADAATRYSIDQ
RIIGGGKSSALAFSYSVTGSYVAVWPLRNNQLEVEHCLINPKDKESRVRIFQVVSLAE
TTNMSLQSVKVFCEQWYGPFRDGDQLGGCAIRSSGFAATPTTAASVVTGSWRVLLATT
SFHASDFGCIQQVTGEKVIEIVREENDLLLLPQELWCSLQQGKDRERVFSVGWVFEPG
HAITSSCVFSSDSKLKEVTMGRETALSDSLC"
ORIGIN
1 ttcgttcgtg actctctctg ctctgctccc aaatgttatc gtcctccgga agctccctct
61 tatggcggag ccgtacacat gtgcctgcac cgccgcctcg gtcttcgcca ccgcttaaag
121 ctctctcctt tcccttctct tccagtttat ggtttattca cagaaccaca atttctcctc
181 tttcgtgttc agctgaaagt tcctcggaga ttgccctggc gcagagccag cctgcccctg
241 atttcaatcc ctggtcggag ttcgctcaaa atgtgtctgg cgaatgggac ggtttcggag
301 cagattttac atgcgaaggg caaccgctag aactacctga atcagtggtt ccagaagcct
361 ttagagaatg ggaagtgaag gtgttcgatt ggcagacgca gtgtcccact cttgcccagc
421 ccaactcact atcctttctt tacaagtcca tcaaactcct ccccaccgtt ggatgtgaag
481 ctgatgcagc cacccgttac agcatcgacc agaggatcat cgggggaggc aaatcctctg
541 cattagcctt ttcgtattct gtcactggct cctatgtcgc tgtgtggcct ttgcggaaca
601 accagcttga ggtggagcat tgtctgatca atccaaagga caaggagtct cgtgtgagga
661 ttttccaggt tgtcagctta gcagagacca ccaacatgtc cttgcagagt gtcaaagttt
721 tctgtgagca gtggtacggt ccgttcagag atggcgatca gcttggaggc tgtgccatcc
781 gtagctccgg ctttgctgct acacctacca ctgcagcttc agtggttacc ggttcttgga
841 gagttctact tgctaccact agctttcacg cctctgattt cggttgtata caacaagtta
901 ctggcgagaa ggtgattgag attgtgagag aagaaaatga tcttttattg cttccgcaag
961 agctgtggtg ctcactccaa caaggcaaag accgcgaaag agtattttca gtaggatggg
1021 tctttgagcc aggccatgct atcacatcca gctgcgtctt ctctagcgat tctaagctaa
1081 aggaggtaac aatggggaga gagactgctc tatcagatag cctttgttga ttcaatcttt
1141 accgggaagg atccagacca tgggaaccat atttctgcag agctttgtag cttttgcata
1201 tcttcgttca gctctatcaa aaacgactgt ttcacgtaca ccgatgtat
//