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NCBI Reference Sequence: NM_200294.1
FASTA Graphics
LOCUS NM_200294 1833 bp mRNA linear VRT 16-SEP-2024 DEFINITION Danio rerio UDP-N-acetylglucosamine pyrophosphorylase 1, like 1 (uap1l1), mRNA. ACCESSION NM_200294 VERSION NM_200294.1 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE 1 (bases 1 to 1833) AUTHORS Luo,D., Hu,W., Chen,S., Xiao,Y., Sun,Y. and Zhu,Z. TITLE Identification of differentially expressed genes between cloned and zygote-developing zebrafish (Danio rerio) embryos at the dome stage using suppression subtractive hybridization JOURNAL Biol Reprod 80 (4), 674-684 (2009) PUBMED 19092113 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC049467.1. ##Evidence-Data-START## Transcript exon combination :: BC049467.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA3505370, SAMEA3505371 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..1833 /organism="Danio rerio" /mol_type="mRNA" /db_xref="taxon:7955" /chromosome="5" /map="5" gene 1..1833 /gene="uap1l1" /gene_synonym="zgc:56509" /note="UDP-N-acetylglucosamine pyrophosphorylase 1, like 1" /db_xref="GeneID:393264" /db_xref="ZFIN:ZDB-GENE-040426-1056" exon 1..441 /gene="uap1l1" /gene_synonym="zgc:56509" /inference="alignment:Splign:2.1.0" misc_feature 144..146 /gene="uap1l1" /gene_synonym="zgc:56509" /note="upstream in-frame stop codon" CDS 156..1673 /gene="uap1l1" /gene_synonym="zgc:56509" /EC_number="2.7.7.-" /note="UDP-N-acteylglucosamine pyrophosphorylase 1, like 1" /codon_start=1 /product="UDP-N-acetylhexosamine pyrophosphorylase-like protein 1" /protein_id="NP_956588.1" /db_xref="GeneID:393264" /db_xref="ZFIN:ZDB-GENE-040426-1056" /translation="MSFEEAKAKLEAAGQTHVLQFWDELSAEERGTFLEEISQLQPDE LVEHCREAAASASRHSSADGRLDARMQPVPPEFIGSVRKSDRETLQKWENEGLLQISQ DRVAVLLLAGGQGTRLGVSYPKGMYNVGLPSGKTLYQIQAERIQKVQELANVRHGCRC TVPWYIMTSEFTLGPTEKFFKDNKYFGLCPSNVVMFEQRMIPAVGFDGKIILEKKNKI AMAPDGNGGLYRSLVDNKILADMERRNVEFLHVYCVDNILVKMADPVFIGFCVTNGAD CGAKVVEKAYPAEPVGVVCRVDGVYQVIEYSEIQPETAELRGSGGELVFSAGNICNHF FTRSFLRDVAEKFESKLKQHVAIKKVPFVDGEGNLVKPTKPNGIKMEKFVFDVFQFSK KFVAFEVLREEEFSPLKNADGAPLDTPTTARRSLLAQHYRWILAAGGSFLDEQNKPFT PKHSTAQIEDPPAVCEISPLVSYFGEGLEMLLNQKNLKSPFILDENEAKNLVHTV" misc_feature 483..494 /gene="uap1l1" /gene_synonym="zgc:56509" /note="propagated from UniProtKB/Swiss-Prot (Q7ZWD4.1); Region: Substrate binding" misc_feature 1068..1073 /gene="uap1l1" /gene_synonym="zgc:56509" /note="propagated from UniProtKB/Swiss-Prot (Q7ZWD4.1); Region: Substrate binding" exon 442..646 /gene="uap1l1" /gene_synonym="zgc:56509" /inference="alignment:Splign:2.1.0" exon 647..822 /gene="uap1l1" /gene_synonym="zgc:56509" /inference="alignment:Splign:2.1.0" exon 823..995 /gene="uap1l1" /gene_synonym="zgc:56509" /inference="alignment:Splign:2.1.0" exon 996..1189 /gene="uap1l1" /gene_synonym="zgc:56509" /inference="alignment:Splign:2.1.0" exon 1190..1330 /gene="uap1l1" /gene_synonym="zgc:56509" /inference="alignment:Splign:2.1.0" exon 1331..1516 /gene="uap1l1" /gene_synonym="zgc:56509" /inference="alignment:Splign:2.1.0" exon 1517..1583 /gene="uap1l1" /gene_synonym="zgc:56509" /inference="alignment:Splign:2.1.0" exon 1584..1767 /gene="uap1l1" /gene_synonym="zgc:56509" /inference="alignment:Splign:2.1.0" ORIGIN 1 atttgcccag ttatatgtaa cttcggctat gtttattgta ccaacaaccg cacagtgatc 61 acgagtttca ggctgttgaa aacaggatct ggatcagcac taatatcagc tcgactccta 121 tcactactgt gttgagcagc ttctagcaga gaaagatgtc ctttgaggaa gcaaaagcga 181 aattagaagc agcaggacag actcatgttt tacagttctg ggatgaactt tctgcggaag 241 aaaggggcac atttctggag gaaatttctc agctgcagcc cgacgagtta gtcgagcact 301 gccgagaagc tgcagcgtcc gcaagccgac attcgagtgc tgatggtcgg cttgatgcgc 361 ggatgcagcc cgttcctcca gagttcattg ggagtgtgcg taaaagtgac agagaaaccc 421 ttcagaagtg ggagaatgaa gggctactgc agatttcaca ggacagagtg gctgttttgc 481 tgttagctgg tggtcagggg actcgacttg gagtatctta tcccaagggc atgtataatg 541 ttgggcttcc aagtgggaaa accctgtacc agattcaggc agagaggatc cagaaagtac 601 aagagctggc caatgtgagg catggctgta ggtgcacagt accatggtac ataatgacca 661 gcgagttcac cctgggaccc acagagaagt tcttcaaaga caacaaatat tttggccttt 721 gtccatccaa tgtggtcatg tttgaacaga ggatgatacc agctgtgggc tttgatggaa 781 agatcatcct ggagaagaaa aacaaaatag ccatggctcc agatggaaat ggcggcctct 841 atcggtcact ggtggacaac aagattttag cggacatgga gagaaggaat gtggagtttc 901 ttcacgtgta ctgtgtggac aacatcttgg tgaagatggc agacccggtt tttattggct 961 tttgtgtaac caacggagca gactgtggtg ccaaggtggt ggaaaaggcc tatcctgcag 1021 agcctgttgg agtggtgtgc cgtgtggacg gtgtatatca ggtgattgag tacagtgaga 1081 tccagccaga gacggcagag ctgcgaggct caggaggaga gcttgtgttc agtgccggga 1141 acatttgcaa tcacttcttt acccggagct tcttgaggga cgtggcagaa aagtttgaga 1201 gtaagctgaa gcagcatgtg gcaatcaaga aagtgccgtt tgtggatgga gaaggaaacc 1261 tggtgaaacc aacaaagccc aatggcatca aaatggagaa atttgtattt gacgtctttc 1321 agttctcaaa gaaatttgtc gcatttgagg tgttgaggga agaggaattt tcacccctga 1381 aaaatgctga tggggcacct ctggacacac caaccacagc acgccgatct ttgctagcac 1441 aacattaccg ctggattctg gcagccggtg gaagcttcct tgatgagcaa aataagccct 1501 tcacaccaaa acatagtact gcacagattg aagacccacc agcagtctgt gaaatctctc 1561 cactcgtatc atactttggc gagggtctgg aaatgctgct aaatcagaag aacttgaagt 1621 cgccttttat acttgatgag aatgaagcca aaaatcttgt gcatacagta taatgttttt 1681 agctgaggat tatgcatggt agatttttga cagtaaagga aatcaaaggg atgcttgcaa 1741 atcaacaata aatacataaa ctagttaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //
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