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Danio rerio UDP-N-acetylglucosamine pyrophosphorylase 1, like 1 (uap1l1), mRNA

NCBI Reference Sequence: NM_200294.1

FASTA Graphics 

LOCUS       NM_200294               1833 bp    mRNA    linear   VRT 16-SEP-2024
DEFINITION  Danio rerio UDP-N-acetylglucosamine pyrophosphorylase 1, like 1
            (uap1l1), mRNA.
ACCESSION   NM_200294
VERSION     NM_200294.1
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE   1  (bases 1 to 1833)
  AUTHORS   Luo,D., Hu,W., Chen,S., Xiao,Y., Sun,Y. and Zhu,Z.
  TITLE     Identification of differentially expressed genes between cloned and
            zygote-developing zebrafish (Danio rerio) embryos at the dome stage
            using suppression subtractive hybridization
  JOURNAL   Biol Reprod 80 (4), 674-684 (2009)
   PUBMED   19092113
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC049467.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC049467.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA3505370, SAMEA3505371
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /db_xref="taxon:7955"
                     /chromosome="5"
                     /map="5"
     gene            1..1833
                     /gene="uap1l1"
                     /gene_synonym="zgc:56509"
                     /note="UDP-N-acetylglucosamine pyrophosphorylase 1, like
                     1"
                     /db_xref="GeneID:393264"
                     /db_xref="ZFIN:ZDB-GENE-040426-1056"
     exon            1..441
                     /gene="uap1l1"
                     /gene_synonym="zgc:56509"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    144..146
                     /gene="uap1l1"
                     /gene_synonym="zgc:56509"
                     /note="upstream in-frame stop codon"
     CDS             156..1673
                     /gene="uap1l1"
                     /gene_synonym="zgc:56509"
                     /EC_number="2.7.7.-"
                     /note="UDP-N-acteylglucosamine pyrophosphorylase 1, like
                     1"
                     /codon_start=1
                     /product="UDP-N-acetylhexosamine pyrophosphorylase-like
                     protein 1"
                     /protein_id="NP_956588.1"
                     /db_xref="GeneID:393264"
                     /db_xref="ZFIN:ZDB-GENE-040426-1056"
                     /translation="MSFEEAKAKLEAAGQTHVLQFWDELSAEERGTFLEEISQLQPDE
                     LVEHCREAAASASRHSSADGRLDARMQPVPPEFIGSVRKSDRETLQKWENEGLLQISQ
                     DRVAVLLLAGGQGTRLGVSYPKGMYNVGLPSGKTLYQIQAERIQKVQELANVRHGCRC
                     TVPWYIMTSEFTLGPTEKFFKDNKYFGLCPSNVVMFEQRMIPAVGFDGKIILEKKNKI
                     AMAPDGNGGLYRSLVDNKILADMERRNVEFLHVYCVDNILVKMADPVFIGFCVTNGAD
                     CGAKVVEKAYPAEPVGVVCRVDGVYQVIEYSEIQPETAELRGSGGELVFSAGNICNHF
                     FTRSFLRDVAEKFESKLKQHVAIKKVPFVDGEGNLVKPTKPNGIKMEKFVFDVFQFSK
                     KFVAFEVLREEEFSPLKNADGAPLDTPTTARRSLLAQHYRWILAAGGSFLDEQNKPFT
                     PKHSTAQIEDPPAVCEISPLVSYFGEGLEMLLNQKNLKSPFILDENEAKNLVHTV"
     misc_feature    483..494
                     /gene="uap1l1"
                     /gene_synonym="zgc:56509"
                     /note="propagated from UniProtKB/Swiss-Prot (Q7ZWD4.1);
                     Region: Substrate binding"
     misc_feature    1068..1073
                     /gene="uap1l1"
                     /gene_synonym="zgc:56509"
                     /note="propagated from UniProtKB/Swiss-Prot (Q7ZWD4.1);
                     Region: Substrate binding"
     exon            442..646
                     /gene="uap1l1"
                     /gene_synonym="zgc:56509"
                     /inference="alignment:Splign:2.1.0"
     exon            647..822
                     /gene="uap1l1"
                     /gene_synonym="zgc:56509"
                     /inference="alignment:Splign:2.1.0"
     exon            823..995
                     /gene="uap1l1"
                     /gene_synonym="zgc:56509"
                     /inference="alignment:Splign:2.1.0"
     exon            996..1189
                     /gene="uap1l1"
                     /gene_synonym="zgc:56509"
                     /inference="alignment:Splign:2.1.0"
     exon            1190..1330
                     /gene="uap1l1"
                     /gene_synonym="zgc:56509"
                     /inference="alignment:Splign:2.1.0"
     exon            1331..1516
                     /gene="uap1l1"
                     /gene_synonym="zgc:56509"
                     /inference="alignment:Splign:2.1.0"
     exon            1517..1583
                     /gene="uap1l1"
                     /gene_synonym="zgc:56509"
                     /inference="alignment:Splign:2.1.0"
     exon            1584..1767
                     /gene="uap1l1"
                     /gene_synonym="zgc:56509"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atttgcccag ttatatgtaa cttcggctat gtttattgta ccaacaaccg cacagtgatc
       61 acgagtttca ggctgttgaa aacaggatct ggatcagcac taatatcagc tcgactccta
      121 tcactactgt gttgagcagc ttctagcaga gaaagatgtc ctttgaggaa gcaaaagcga
      181 aattagaagc agcaggacag actcatgttt tacagttctg ggatgaactt tctgcggaag
      241 aaaggggcac atttctggag gaaatttctc agctgcagcc cgacgagtta gtcgagcact
      301 gccgagaagc tgcagcgtcc gcaagccgac attcgagtgc tgatggtcgg cttgatgcgc
      361 ggatgcagcc cgttcctcca gagttcattg ggagtgtgcg taaaagtgac agagaaaccc
      421 ttcagaagtg ggagaatgaa gggctactgc agatttcaca ggacagagtg gctgttttgc
      481 tgttagctgg tggtcagggg actcgacttg gagtatctta tcccaagggc atgtataatg
      541 ttgggcttcc aagtgggaaa accctgtacc agattcaggc agagaggatc cagaaagtac
      601 aagagctggc caatgtgagg catggctgta ggtgcacagt accatggtac ataatgacca
      661 gcgagttcac cctgggaccc acagagaagt tcttcaaaga caacaaatat tttggccttt
      721 gtccatccaa tgtggtcatg tttgaacaga ggatgatacc agctgtgggc tttgatggaa
      781 agatcatcct ggagaagaaa aacaaaatag ccatggctcc agatggaaat ggcggcctct
      841 atcggtcact ggtggacaac aagattttag cggacatgga gagaaggaat gtggagtttc
      901 ttcacgtgta ctgtgtggac aacatcttgg tgaagatggc agacccggtt tttattggct
      961 tttgtgtaac caacggagca gactgtggtg ccaaggtggt ggaaaaggcc tatcctgcag
     1021 agcctgttgg agtggtgtgc cgtgtggacg gtgtatatca ggtgattgag tacagtgaga
     1081 tccagccaga gacggcagag ctgcgaggct caggaggaga gcttgtgttc agtgccggga
     1141 acatttgcaa tcacttcttt acccggagct tcttgaggga cgtggcagaa aagtttgaga
     1201 gtaagctgaa gcagcatgtg gcaatcaaga aagtgccgtt tgtggatgga gaaggaaacc
     1261 tggtgaaacc aacaaagccc aatggcatca aaatggagaa atttgtattt gacgtctttc
     1321 agttctcaaa gaaatttgtc gcatttgagg tgttgaggga agaggaattt tcacccctga
     1381 aaaatgctga tggggcacct ctggacacac caaccacagc acgccgatct ttgctagcac
     1441 aacattaccg ctggattctg gcagccggtg gaagcttcct tgatgagcaa aataagccct
     1501 tcacaccaaa acatagtact gcacagattg aagacccacc agcagtctgt gaaatctctc
     1561 cactcgtatc atactttggc gagggtctgg aaatgctgct aaatcagaag aacttgaagt
     1621 cgccttttat acttgatgag aatgaagcca aaaatcttgt gcatacagta taatgttttt
     1681 agctgaggat tatgcatggt agatttttga cagtaaagga aatcaaaggg atgcttgcaa
     1741 atcaacaata aatacataaa ctagttaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//
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