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Arabidopsis thaliana Radical SAM superfamily protein (BIO2), mRNA

NCBI Reference Sequence: NM_129897.4

FASTA Graphics 

LOCUS       NM_129897               1502 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana Radical SAM superfamily protein (BIO2), mRNA.
ACCESSION   NM_129897
VERSION     NM_129897.4
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 1502)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1502)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 1502)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003071).
            
            On Sep 12, 2016 this sequence version replaced NM_129897.3.
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     gene            1..1502
                     /gene="BIO2"
                     /locus_tag="AT2G43360"
                     /gene_synonym="BIOB; BIOTIN AUXOTROPH 2; BIOTIN AUXOTROPH
                     B; BIOTIN SYNTHASE; T1O24.10"
                     /note="Catalyzes the conversion of dethiobiotin to
                     biotin."
                     /db_xref="Araport:AT2G43360"
                     /db_xref="GeneID:818937"
                     /db_xref="TAIR:AT2G43360"
     CDS             124..1260
                     /gene="BIO2"
                     /locus_tag="AT2G43360"
                     /gene_synonym="BIOB; BIOTIN AUXOTROPH 2; BIOTIN AUXOTROPH
                     B; BIOTIN SYNTHASE; T1O24.10"
                     /inference="Similar to RNA sequence,
                     EST:INSD:AU227927.1,INSD:DR246710.1,INSD:H36418.1,
                     INSD:DR246716.1,INSD:BP868943.1,INSD:ES097758.1,
                     INSD:DR246724.1,INSD:EL320387.1,INSD:DR246706.1,
                     INSD:DR246718.1,INSD:BP854339.1,INSD:EL197101.1,
                     INSD:ES201462.1,INSD:AA651130.1,INSD:CF773488.1,
                     INSD:EL224284.1,INSD:BP629319.1,INSD:EH965843.1,
                     INSD:EH834645.1,INSD:EH941838.1,INSD:BP594240.1,
                     INSD:AV534384.1,INSD:DR377223.1,INSD:EH864275.1,
                     INSD:DR246712.1,INSD:DR246722.1,INSD:DR246699.1,
                     INSD:DR246702.1,INSD:DR246700.1,INSD:DR246719.1,
                     INSD:BP661483.1,INSD:AV564342.1,INSD:ES142941.1,
                     INSD:DR246704.1,INSD:EH990106.1,INSD:DR246696.1,
                     INSD:ES026851.1,INSD:ES047206.1,INSD:DR246708.1,
                     INSD:BE528489.1,INSD:DR246695.1,INSD:DR246697.1,
                     INSD:DR246703.1,INSD:DR246694.1,INSD:DR246709.1,
                     INSD:DR246720.1,INSD:AU236922.1,INSD:DR246715.1,
                     INSD:DR246705.1,INSD:AA720037.1,INSD:AI998729.1,
                     INSD:BX839548.1,INSD:DR246701.1,INSD:ES111475.1,
                     INSD:EL020686.1,INSD:BX835668.1,INSD:DR246711.1,
                     INSD:DR246714.1,INSD:EL996323.1,INSD:AV556499.1,
                     INSD:EL241256.1,INSD:ES122996.1,INSD:T20529.1,
                     INSD:EL224776.1,INSD:BP788591.1,INSD:EH841271.1,
                     INSD:DR246713.1,INSD:AV561887.1,INSD:DR246707.1,
                     INSD:ES110855.1,INSD:DR246698.1,INSD:BP667547.1,
                     INSD:AI994102.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:AY088152.1,INSD:U31806.1,INSD:BX820829.1,
                     INSD:L34413.1,INSD:BX818983.1,INSD:BX819210.1,
                     INSD:BT024899.1,INSD:BT003848.1,INSD:BX820434.1"
                     /note="BIOTIN AUXOTROPH 2 (BIO2); CONTAINS InterPro
                     DOMAIN/s: Biotin/thiamin synthesis-associated protein
                     (InterPro:IPR010722), Aldolase-type TIM barrel
                     (InterPro:IPR013785), Elongator protein 3/MiaB/NifB
                     (InterPro:IPR006638), Radical SAM (InterPro:IPR007197),
                     Biotin synthase (InterPro:IPR002684); Has 5366 Blast hits
                     to 5366 proteins in 2012 species: Archae - 191; Bacteria -
                     4453; Metazoa - 6; Fungi - 120; Plants - 75; Viruses - 0;
                     Other Eukaryotes - 521 (source: NCBI BLink)."
                     /codon_start=1
                     /product="Radical SAM superfamily protein"
                     /protein_id="NP_181864.1"
                     /db_xref="Araport:AT2G43360"
                     /db_xref="GeneID:818937"
                     /db_xref="TAIR:AT2G43360"
                     /translation="MMLVRSVFRSQLRPSVSGGLQSASCYSSLSAASAEAERTIREGP
                     RNDWSRDEIKSVYDSPLLDLLFHGAQVHRHVHNFREVQQCTLLSIKTGGCSEDCSYCP
                     QSSRYSTGVKAQRLMSKDAVIDAAKKAKEAGSTRFCMGAAWRDTIGRKTNFSQILEYI
                     KEIRGMGMEVCCTLGMIEKQQALELKKAGLTAYNHNLDTSREYYPNVITTRSYDDRLE
                     TLSHVRDAGINVCSGGIIGLGEAEEDRIGLLHTLATLPSHPESVPINALLAVKGTPLE
                     DQKPVEIWEMIRMIGTARIVMPKAMVRLSAGRVRFSMSEQALCFLAGANSIFTGEKLL
                     TTPNNDFDADQLMFKTLGLIPKPPSFSEDDSESENCEKVASASH"
ORIGIN      
        1 acggtggctg ctttgggtta ggtgaatcac tcactgaaga gtgaaaagct ctagcacaaa
       61 ccaaacacca aatctcattt cttcttcttc ttctttttcc acattttctg attagcagat
      121 caaatgatgc ttgttcgatc tgtatttcga tctcagttgc gaccctctgt ctcgggtggt
      181 ctgcaatctg cttcttgcta ttcttcatta tctgctgctt cagctgaagc tgagaggact
      241 atcagagaag gtcccagaaa cgattggagt agagatgaaa tcaagtctgt ttatgattct
      301 cctcttcttg acctcctctt ccatggagct caggttcata gacatgttca taacttcagg
      361 gaggtacaac aatgtaccct cctctccata aagactggtg gctgtagtga agactgttca
      421 tattgtcctc agtcttcgag atatagcact ggagttaagg cacaaagact catgtctaag
      481 gacgctgtca ttgatgctgc taagaaggca aaagaagctg ggagcacacg tttttgcatg
      541 ggtgctgctt ggcgagatac aattggacgg aaaaccaact tcagccagat tcttgaatac
      601 atcaaagaaa taagaggcat ggggatggaa gtttgctgca ccttaggcat gattgagaaa
      661 caacaagcac tagagctaaa gaaggctggc ctcactgctt ataaccacaa tcttgatact
      721 tcaagagagt actacccaaa cgtcatcact actagaagtt atgacgatcg ccttgaaact
      781 cttagccatg ttcgtgatgc tggaatcaac gtttgttcag gaggaatcat agggcttggt
      841 gaggcagagg aagacagaat aggtttatta cacacgctgg caacacttcc ttctcaccct
      901 gagagtgttc ccattaatgc tctacttgca gtgaaaggca ctcctcttga agaccagaag
      961 ccagttgaga tatgggagat gatcaggatg attggaaccg cacgtattgt aatgccaaaa
     1021 gcgatggtga gactgtctgc tggtagagtc cggttctcaa tgtccgaaca agctctctgt
     1081 ttccttgctg gtgcaaactc tatcttcacc ggagagaagc ttttaaccac accaaacaat
     1141 gattttgacg ctgaccagct catgttcaag acattaggcc tcattcctaa accgccaagt
     1201 ttctctgaag atgattctga atcagaaaac tgcgagaaag ttgcttccgc ttctcactaa
     1261 tatcattatc cacttttttt ttttgtttgg agtcgggaca ctatagagca gtccctttta
     1321 ctatgtagca tggtttgacg attttgtgat atcatttttc gttaatcgtt attcgaagat
     1381 gtctagattt ctcatctgaa agtaaactta ttattctaga gtgtcatgaa aattgaagag
     1441 aaaagttgca attaaatctc tcaaggctga gatgggcttt aaattaggcg taaacttatc
     1501 aa
//
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Reference sequence information

  • RefSeq protein product
    See the reference protein sequence for Radical SAM superfamily protein (NP_181864.1).

More about the BIO2 gene

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