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Arabidopsis thaliana Concanavalin A-like lectin protein kinase family protein (AT2G29220), mRNA

NCBI Reference Sequence: NM_128478.2

FASTA Graphics 

LOCUS       NM_128478               2063 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana Concanavalin A-like lectin protein kinase
            family protein (AT2G29220), mRNA.
ACCESSION   NM_128478
VERSION     NM_128478.2
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 2063)
  AUTHORS   Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
            Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
            Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
            Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
            Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
            Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
            Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
            Venter,J.C.
  TITLE     Sequence and analysis of chromosome 2 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 402 (6763), 761-768 (1999)
   PUBMED   10617197
REFERENCE   2  (bases 1 to 2063)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 2063)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 2063)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003071).
            
            On Sep 12, 2016 this sequence version replaced NM_128478.1.
FEATURES             Location/Qualifiers
     source          1..2063
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /ecotype="Columbia"
     gene            1..2063
                     /locus_tag="AT2G29220"
                     /gene_synonym="F16P2.40; F16P2_40; L-type lectin receptor
                     kinase III.1; LecRK-III.1"
                     /db_xref="Araport:AT2G29220"
                     /db_xref="GeneID:817471"
                     /db_xref="TAIR:AT2G29220"
     CDS             28..1911
                     /locus_tag="AT2G29220"
                     /gene_synonym="F16P2.40; F16P2_40; L-type lectin receptor
                     kinase III.1; LecRK-III.1"
                     /note="Concanavalin A-like lectin protein kinase family
                     protein; FUNCTIONS IN: kinase activity; INVOLVED IN:
                     protein amino acid phosphorylation; LOCATED IN:
                     endomembrane system; CONTAINS InterPro DOMAIN/s: Legume
                     lectin, beta chain (InterPro:IPR001220), Protein kinase,
                     catalytic domain (InterPro:IPR000719),
                     Serine-threonine/tyrosine-protein kinase
                     (InterPro:IPR001245), Concanavalin A-like lectin/glucanase
                     (InterPro:IPR008985), Concanavalin A-like
                     lectin/glucanase, subgroup (InterPro:IPR013320), Protein
                     kinase-like domain (InterPro:IPR011009); BEST Arabidopsis
                     thaliana protein match is: Concanavalin A-like lectin
                     protein kinase family protein (TAIR:AT2G29250.1); Has
                     78093 Blast hits to 77063 proteins in 2493 species: Archae
                     - 51; Bacteria - 5855; Metazoa - 27961; Fungi - 5428;
                     Plants - 28546; Viruses - 215; Other Eukaryotes - 10037
                     (source: NCBI BLink)."
                     /codon_start=1
                     /product="Concanavalin A-like lectin protein kinase family
                     protein"
                     /protein_id="NP_180485.1"
                     /db_xref="Araport:AT2G29220"
                     /db_xref="GeneID:817471"
                     /db_xref="TAIR:AT2G29220"
                     /translation="MITFKSIALTIIFLSYFVSCVSSQRETKFLNHGFLGANLLNFGS
                     SKVYPSGLLELTNTSMRQIGQAFHGFPIPLSNPNSTNSVSFSTSFIFAITQGTGAPGH
                     GLAFVISPSMDFSGAFPSNYLGLFNTSNNGNSLNRILAIEFDTVQAVELNDIDDNHVG
                     IDLNGVISIASAPAAYFDDREAKNISLRLASGKPVRVWIEYNATETMLNVTLAPLDRP
                     KPSIPLLSRKMNLSGIFSQEHHVGFSASTGTVASSHFVLGWSFNIEGKESDFDITKLP
                     SLPDPPPTLSPSPSPPVSTEKKSNNTMLIIIVAASATVALMILIFSGFWFLRRDKIFF
                     IGGARKFSYQTISNATGGFDNSKLLGERNSGSFYKGQLAPTEIIAVKKITCTTRQQKT
                     TLIAEIDAISKIKQRNLVNLHGYCSKGKDIYLVYEYVPNGSLDRFLFNNDRPVLTWSD
                     RFCIIKGIAAALQHLHGEGQKPLIHGNVKASNVLLDEELNARLGDYGQGSRHSTTGHV
                     APELVNTGKVTRDTDVFAFGVLMMEIVCGRKAIEPTKAPEEISLVNWVLQGFKKGDLL
                     MSCDTRINRENLVAREVLLVLKTGLLCANRSPESRPMMKNVFRYLEGTEALPHDDYLF
                     YGV"
ORIGIN      
        1 acttcaaact ctaaaaactc atcaacgatg attaccttca aatctatagc tctaacgata
       61 atcttcctat catattttgt ttcttgtgtc tcaagtcaac gagagaccaa gtttcttaac
      121 catggcttcc tcggggctaa tctcctcaac ttcggctcct ccaaggtcta cccaagtggc
      181 ctcttggagt tgacaaacac ttcgatgagg cagataggtc aagcttttca tggctttccc
      241 atccccttgt caaaccctaa ctcaacaaat tcggtttctt tttccacaag cttcatcttc
      301 gccatcactc aaggaaccgg cgcaccaggc catggcctag ctttcgtcat ttcaccctcg
      361 atggacttca gtggtgcttt tcccagcaat tatctgggcc tcttcaacac ctccaacaat
      421 ggaaactcct tgaatcgaat tcttgcaatt gaatttgaca ccgtgcaagc ggttgagttg
      481 aatgatattg acgataacca cgtaggcatc gacctaaatg gagtgatctc cattgcgtct
      541 gcaccggctg catattttga tgaccgagag gccaagaaca taagcttgag gctggcgagt
      601 gggaaaccag taagagtctg gatcgaatac aacgccactg agacaatgct taatgtcaca
      661 ttggctcctc tagatcgtcc gaagccaagt atacctcttc tctcgagaaa aatgaatctt
      721 tcagggattt tctcccaaga acatcacgtt ggattctctg cgtccacggg gactgtagcg
      781 agctcacatt ttgttctagg ttggagcttc aacatcgaag ggaaagaatc agactttgat
      841 atcacgaagc ttccttctct cccagatccg ccaccaacat tgtctccatc cccaagtcct
      901 ccggtttcaa ccgagaagaa gtcgaacaac acgatgctga tcataatcgt cgctgcatca
      961 gcaacggttg cactcatgat cctaatcttc tcaggatttt ggttcttacg tagagacaaa
     1021 atattcttca tcggaggtgc aaggaaattc tcctaccaga cgatatcgaa cgcaacggga
     1081 ggtttcgaca attctaaact cttgggagag agaaactctg gaagtttcta caaaggacag
     1141 cttgctccca cagagataat tgccgtaaag aagattactt gcaccacaag gcaacaaaag
     1201 acaaccctaa tagccgagat cgatgcgatc tccaagatta aacaacgaaa cctagtcaat
     1261 ctacatggtt actgcagcaa aggaaaagat atctatcttg tttacgagta tgtccccaat
     1321 ggaagcctag accggttctt gttcaacaac gaccgaccag ttctcacctg gtcagatcgg
     1381 ttctgtataa taaaggggat tgcagcagca cttcaacacc ttcacggtga aggtcaaaaa
     1441 cctttgattc atggaaacgt aaaagcaagc aacgtactct tagacgaaga gctaaacgct
     1501 cgactaggcg actatggaca aggaagcaga cacagcacca cagggcacgt tgcaccagaa
     1561 ctagtcaaca cgggaaaggt aacacgtgac acagatgtgt ttgcgtttgg agtgttgatg
     1621 atggagatcg tttgtggaag gaaggccata gagccgacta aagcaccaga agagataagt
     1681 ttggtgaact gggtgcttca agggttcaag aaaggtgatc tgttaatgag ctgcgacaca
     1741 agaatcaata gagagaattt ggtagctcga gaagtattat tggttctgaa aacaggactt
     1801 ctctgcgcca accgatctcc agaatcaagg ccaatgatga aaaatgtgtt tcggtatctc
     1861 gaaggaactg aagctctccc tcatgatgac tacctcttct atggagtcta aaaagtgatc
     1921 tcacaaacgt gtctgtattt tgaattgtgt gatttcaaga ttggacgaag atgcattaag
     1981 catgatgatg tgaataaagc ctataattgt attttactcc atttgtaaat ttgaaaataa
     2041 gaatttctgg ttttgagaaa tat
//
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Reference sequence information

  • RefSeq protein product
    See the reference protein sequence for Concanavalin A-like lectin protein kinase family protein (NP_180485.1).

More about the AT2G29220 gene

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