LOCUS NM_128478 2063 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana Concanavalin A-like lectin protein kinase
family protein (AT2G29220), mRNA.
ACCESSION NM_128478
VERSION NM_128478.2
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 2063)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 2063)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 2063)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 2063)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003071).
On Sep 12, 2016 this sequence version replaced NM_128478.1.
FEATURES Location/Qualifiers
source 1..2063
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
gene 1..2063
/locus_tag="AT2G29220"
/gene_synonym="F16P2.40; F16P2_40; L-type lectin receptor
kinase III.1; LecRK-III.1"
/db_xref="Araport:AT2G29220"
/db_xref="GeneID:817471"
/db_xref="TAIR:AT2G29220"
CDS 28..1911
/locus_tag="AT2G29220"
/gene_synonym="F16P2.40; F16P2_40; L-type lectin receptor
kinase III.1; LecRK-III.1"
/note="Concanavalin A-like lectin protein kinase family
protein; FUNCTIONS IN: kinase activity; INVOLVED IN:
protein amino acid phosphorylation; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: Legume
lectin, beta chain (InterPro:IPR001220), Protein kinase,
catalytic domain (InterPro:IPR000719),
Serine-threonine/tyrosine-protein kinase
(InterPro:IPR001245), Concanavalin A-like lectin/glucanase
(InterPro:IPR008985), Concanavalin A-like
lectin/glucanase, subgroup (InterPro:IPR013320), Protein
kinase-like domain (InterPro:IPR011009); BEST Arabidopsis
thaliana protein match is: Concanavalin A-like lectin
protein kinase family protein (TAIR:AT2G29250.1); Has
78093 Blast hits to 77063 proteins in 2493 species: Archae
- 51; Bacteria - 5855; Metazoa - 27961; Fungi - 5428;
Plants - 28546; Viruses - 215; Other Eukaryotes - 10037
(source: NCBI BLink)."
/codon_start=1
/product="Concanavalin A-like lectin protein kinase family
protein"
/protein_id="NP_180485.1"
/db_xref="Araport:AT2G29220"
/db_xref="GeneID:817471"
/db_xref="TAIR:AT2G29220"
/translation="MITFKSIALTIIFLSYFVSCVSSQRETKFLNHGFLGANLLNFGS
SKVYPSGLLELTNTSMRQIGQAFHGFPIPLSNPNSTNSVSFSTSFIFAITQGTGAPGH
GLAFVISPSMDFSGAFPSNYLGLFNTSNNGNSLNRILAIEFDTVQAVELNDIDDNHVG
IDLNGVISIASAPAAYFDDREAKNISLRLASGKPVRVWIEYNATETMLNVTLAPLDRP
KPSIPLLSRKMNLSGIFSQEHHVGFSASTGTVASSHFVLGWSFNIEGKESDFDITKLP
SLPDPPPTLSPSPSPPVSTEKKSNNTMLIIIVAASATVALMILIFSGFWFLRRDKIFF
IGGARKFSYQTISNATGGFDNSKLLGERNSGSFYKGQLAPTEIIAVKKITCTTRQQKT
TLIAEIDAISKIKQRNLVNLHGYCSKGKDIYLVYEYVPNGSLDRFLFNNDRPVLTWSD
RFCIIKGIAAALQHLHGEGQKPLIHGNVKASNVLLDEELNARLGDYGQGSRHSTTGHV
APELVNTGKVTRDTDVFAFGVLMMEIVCGRKAIEPTKAPEEISLVNWVLQGFKKGDLL
MSCDTRINRENLVAREVLLVLKTGLLCANRSPESRPMMKNVFRYLEGTEALPHDDYLF
YGV"
ORIGIN
1 acttcaaact ctaaaaactc atcaacgatg attaccttca aatctatagc tctaacgata
61 atcttcctat catattttgt ttcttgtgtc tcaagtcaac gagagaccaa gtttcttaac
121 catggcttcc tcggggctaa tctcctcaac ttcggctcct ccaaggtcta cccaagtggc
181 ctcttggagt tgacaaacac ttcgatgagg cagataggtc aagcttttca tggctttccc
241 atccccttgt caaaccctaa ctcaacaaat tcggtttctt tttccacaag cttcatcttc
301 gccatcactc aaggaaccgg cgcaccaggc catggcctag ctttcgtcat ttcaccctcg
361 atggacttca gtggtgcttt tcccagcaat tatctgggcc tcttcaacac ctccaacaat
421 ggaaactcct tgaatcgaat tcttgcaatt gaatttgaca ccgtgcaagc ggttgagttg
481 aatgatattg acgataacca cgtaggcatc gacctaaatg gagtgatctc cattgcgtct
541 gcaccggctg catattttga tgaccgagag gccaagaaca taagcttgag gctggcgagt
601 gggaaaccag taagagtctg gatcgaatac aacgccactg agacaatgct taatgtcaca
661 ttggctcctc tagatcgtcc gaagccaagt atacctcttc tctcgagaaa aatgaatctt
721 tcagggattt tctcccaaga acatcacgtt ggattctctg cgtccacggg gactgtagcg
781 agctcacatt ttgttctagg ttggagcttc aacatcgaag ggaaagaatc agactttgat
841 atcacgaagc ttccttctct cccagatccg ccaccaacat tgtctccatc cccaagtcct
901 ccggtttcaa ccgagaagaa gtcgaacaac acgatgctga tcataatcgt cgctgcatca
961 gcaacggttg cactcatgat cctaatcttc tcaggatttt ggttcttacg tagagacaaa
1021 atattcttca tcggaggtgc aaggaaattc tcctaccaga cgatatcgaa cgcaacggga
1081 ggtttcgaca attctaaact cttgggagag agaaactctg gaagtttcta caaaggacag
1141 cttgctccca cagagataat tgccgtaaag aagattactt gcaccacaag gcaacaaaag
1201 acaaccctaa tagccgagat cgatgcgatc tccaagatta aacaacgaaa cctagtcaat
1261 ctacatggtt actgcagcaa aggaaaagat atctatcttg tttacgagta tgtccccaat
1321 ggaagcctag accggttctt gttcaacaac gaccgaccag ttctcacctg gtcagatcgg
1381 ttctgtataa taaaggggat tgcagcagca cttcaacacc ttcacggtga aggtcaaaaa
1441 cctttgattc atggaaacgt aaaagcaagc aacgtactct tagacgaaga gctaaacgct
1501 cgactaggcg actatggaca aggaagcaga cacagcacca cagggcacgt tgcaccagaa
1561 ctagtcaaca cgggaaaggt aacacgtgac acagatgtgt ttgcgtttgg agtgttgatg
1621 atggagatcg tttgtggaag gaaggccata gagccgacta aagcaccaga agagataagt
1681 ttggtgaact gggtgcttca agggttcaag aaaggtgatc tgttaatgag ctgcgacaca
1741 agaatcaata gagagaattt ggtagctcga gaagtattat tggttctgaa aacaggactt
1801 ctctgcgcca accgatctcc agaatcaagg ccaatgatga aaaatgtgtt tcggtatctc
1861 gaaggaactg aagctctccc tcatgatgac tacctcttct atggagtcta aaaagtgatc
1921 tcacaaacgt gtctgtattt tgaattgtgt gatttcaaga ttggacgaag atgcattaag
1981 catgatgatg tgaataaagc ctataattgt attttactcc atttgtaaat ttgaaaataa
2041 gaatttctgg ttttgagaaa tat
//