LOCUS NM_124322 907 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana basic leucine-zipper 1 (bZIP1), mRNA.
ACCESSION NM_124322
VERSION NM_124322.3
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 907)
AUTHORS Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
CONSRTM Kazusa DNA Research Institute; Cold Spring Harbor and Washington
University in St Louis Sequencing Consortium; European Union
Arabidopsis Genome Sequencing Consortium
TITLE Sequence and analysis of chromosome 5 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 823-826 (2000)
PUBMED 11130714
REFERENCE 2 (bases 1 to 907)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 907)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 907)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003076).
On Feb 17, 2004 this sequence version replaced NM_124322.2.
FEATURES Location/Qualifiers
source 1..907
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="5"
/ecotype="Columbia"
gene 1..907
/gene="bZIP1"
/locus_tag="AT5G49450"
/gene_synonym="AtbZIP1; basic leucine-zipper 1; K7J8.13;
K7J8_13"
/note="Encodes a transcription activator is a positive
regulator of plant tolerance to salt, osmotic and drought
stresses."
/db_xref="Araport:AT5G49450"
/db_xref="GeneID:835005"
/db_xref="TAIR:AT5G49450"
CDS 317..754
/gene="bZIP1"
/locus_tag="AT5G49450"
/gene_synonym="AtbZIP1; basic leucine-zipper 1; K7J8.13;
K7J8_13"
/inference="Similar to RNA sequence,
EST:INSD:DN604483.1,INSD:EL049327.1,INSD:EL115749.1,
INSD:AV832288.1,INSD:EL186530.1,INSD:EL020935.1,
INSD:EH989178.1,INSD:EL318231.1,INSD:EL084108.1,
INSD:EL240779.1,INSD:EL174494.1,INSD:EL328888.1,
INSD:EL305146.1,INSD:DR205667.1,INSD:EH987916.1,
INSD:BP610253.1,INSD:DR751246.1,INSD:EH847601.1,
INSD:EL066259.1,INSD:DR751385.1,INSD:BP614083.1,
INSD:EL224487.1,INSD:DR751384.1,INSD:EL207952.1,
INSD:EL154580.1,INSD:EG487027.1,INSD:EL184271.1,
INSD:EL291272.1,INSD:EL087024.1,INSD:EL149983.1,
INSD:EL066070.1,INSD:EL144668.1,INSD:BP831528.1,
INSD:BP853544.1,INSD:AV790498.1,INSD:ES097324.1,
INSD:BP600288.1,INSD:EL022254.1,INSD:EH809716.1,
INSD:EH829002.1,INSD:EL265599.1,INSD:BP598445.1,
INSD:EH865355.1,INSD:DR378132.1,INSD:EL140065.1,
INSD:EL102201.1,INSD:EH855916.1,INSD:BP621346.1,
INSD:EH847333.1,INSD:EH986534.1,INSD:EL012095.1,
INSD:BP582857.1,INSD:EH923257.1,INSD:EL030880.1,
INSD:DR362698.1,INSD:EL054794.1,INSD:EL084393.1,
INSD:EL014221.1,INSD:CD531379.1,INSD:ES134087.1,
INSD:DR205669.1,INSD:BP603440.1,INSD:EH820810.1,
INSD:EL140307.1,INSD:DR751533.1,INSD:DR205668.1,
INSD:DR751534.1,INSD:EH956125.1,INSD:EL163111.1,
INSD:BP576894.1,INSD:EL105803.1,INSD:EL216497.1,
INSD:EL063595.1,INSD:EL149018.1,INSD:DR205666.1,
INSD:BP591884.1,INSD:BP615884.1,INSD:EH889790.1,
INSD:EL048085.1,INSD:AV813172.1,INSD:EH808167.1,
INSD:BP654555.1,INSD:BP619261.1,INSD:EH809582.1,
INSD:DR750586.1,INSD:AV820421.1,INSD:EH923393.1,
INSD:EH995051.1,INSD:EH992321.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX833418.1,INSD:BT000400.1,INSD:AY136307.1,
INSD:AF400618.1,INSD:AY088207.1"
/note="basic leucine-zipper 1 (bZIP1); FUNCTIONS IN: DNA
binding, protein heterodimerization activity,
sequence-specific DNA binding transcription factor
activity; INVOLVED IN: anther dehiscence, regulation of
transcription, DNA-dependent; LOCATED IN: nucleus,
chloroplast; EXPRESSED IN: male gametophyte, anther,
pollen tube; EXPRESSED DURING: L mature pollen stage, M
germinated pollen stage; CONTAINS InterPro DOMAIN/s:
Basic-leucine zipper (bZIP) transcription factor
(InterPro:IPR004827), Basic leucine zipper
(InterPro:IPR011700); BEST Arabidopsis thaliana protein
match is: G-box binding factor 6 (TAIR:AT4G34590.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink)."
/codon_start=1
/product="basic leucine-zipper 1"
/protein_id="NP_199756.1"
/db_xref="GeneID:835005"
/db_xref="TAIR:AT5G49450"
/db_xref="Araport:AT5G49450"
/translation="MANAEKTSSGSDIDEKKRKRKLSNRESARRSRLKKQKLMEDTIH
EISSLERRIKENSERCRAVKQRLDSVETENAGLRSEKIWLSSYVSDLENMIATTSLTL
TQSGGGDCVDDQNANAGIAVGDCRRTPWKLSCGSLQPMASFKT"
ORIGIN
1 ttctcccact ttccttattt tcgatcttat ccttatcttc ttccttgttc tatttctctt
61 ctaactaatc tcttctcttc tcttaaaatc aaacgtaatc ataaataaag atcttcttgt
121 ttaatttctc ttgatcctcg caaaatcaca gattcttgaa attctttttt cttgtcttga
181 aattcttgag ttcttgagtt atgaaaagac aatggacaga gttatgaaat gataaatctc
241 aaccaattcc ttgtttatca ttctatatca gttgtgattc ttcattggtt ttacgttatc
301 tcttgaacaa aaaaacatgg caaacgcaga gaagacaagt tcaggttccg acatagatga
361 gaagaaaaga aaacgcaagt tatcaaaccg cgaatctgca aggaggtcgc gtttgaagaa
421 acagaagtta atggaagaca cgattcatga gatctccagt cttgaacgac gaatcaaaga
481 gaacagtgag agatgtcgag ctgtaaaaca gaggcttgac tcggtcgaaa cggagaacgc
541 gggtcttaga tcggagaaga tttggctctc gagttacgtt agcgatttag agaatatgat
601 tgctacgacg agtttaacgc tgacgcagag tggtggtggc gattgtgtcg acgatcagaa
661 cgcaaacgcg ggaatagcgg ttggagattg tagacgtaca ccgtggaaat tgagttgtgg
721 ttctctacaa ccaatggcgt cctttaagac atgagatttg tgtattagtg tgtgttttac
781 tttggtcatt ttatagtttt tgtaatcttt ttatatcgaa ttgtttcttc tcattacttt
841 ctgaattctg atacaattgc atatcttatt gttttcaaca ttttcattta acgttatatg
901 attttcg
//