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Arabidopsis thaliana regulatory protein (NPR1) (NPR1), mRNA

NCBI Reference Sequence: NM_105102.3

FASTA Graphics 

LOCUS       NM_105102               2614 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana regulatory protein (NPR1) (NPR1), mRNA.
ACCESSION   NM_105102
VERSION     NM_105102.3
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 2614)
  AUTHORS   Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
            White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
            Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
            Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
            Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
            Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
            Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
            Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
            Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
            Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
            Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
            Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
            Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
            Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
            Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
            Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
            Fraser,C.M., Venter,J.C. and Davis,R.W.
  TITLE     Sequence and analysis of chromosome 1 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 816-820 (2000)
   PUBMED   11130712
REFERENCE   2  (bases 1 to 2614)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 2614)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 2614)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   5  (bases 1 to 2614)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003070).
            
            On Sep 12, 2016 this sequence version replaced NM_105102.2.
FEATURES             Location/Qualifiers
     source          1..2614
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /ecotype="Columbia"
     gene            1..2614
                     /gene="NPR1"
                     /locus_tag="AT1G64280"
                     /gene_synonym="ARABIDOPSIS NONEXPRESSER OF PR GENES 1;
                     ATNPR1; F15H21.6; F15H21_6; NIM1; NON-INDUCIBLE IMMUNITY
                     1; NONEXPRESSER OF PR GENES 1; REGULATORY PROTEIN NPR1;
                     SAI1; SALICYLIC ACID INSENSITIVE 1"
                     /note="This gene is a key regulator of the salicylic acid
                     (SA)-mediated systemic acquired resistance (SAR) pathway.
                     It is similar to the transcription factor inhibitor I
                     kappa B, and contains ankyrin repeats. It confers
                     resistance to the pathogens Pseudomonas syringae and
                     Peronospora parasitica in a dosage-dependent fashion.
                     Although transgenic Arabidopsis plants overexpressing NPR1
                     acquire enhanced sensitivity to SA and (benzothiadiazole)
                     BTH, they display no obvious detrimental morphological
                     changes and do not have elevated pathogenesis-related gene
                     expression until activated by inducers or pathogens."
                     /db_xref="Araport:AT1G64280"
                     /db_xref="GeneID:842733"
                     /db_xref="TAIR:AT1G64280"
     CDS             252..2033
                     /gene="NPR1"
                     /locus_tag="AT1G64280"
                     /gene_synonym="ARABIDOPSIS NONEXPRESSER OF PR GENES 1;
                     ATNPR1; F15H21.6; F15H21_6; NIM1; NON-INDUCIBLE IMMUNITY
                     1; NONEXPRESSER OF PR GENES 1; REGULATORY PROTEIN NPR1;
                     SAI1; SALICYLIC ACID INSENSITIVE 1"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EL201365.1,INSD:BP666956.1,INSD:BP598549.1,
                     INSD:BP622100.1,INSD:BP571537.1,INSD:BP577700.1,
                     INSD:EH838194.1,INSD:BP571734.1,INSD:EL137225.1,
                     INSD:AV557971.1,INSD:AV792794.1,INSD:AI997958.1,
                     INSD:EL235963.1,INSD:AV803934.1,INSD:AV796340.1,
                     INSD:AV538866.1,INSD:BU636357.1,INSD:EL154260.1,
                     INSD:EL154331.1,INSD:BP580253.1,INSD:DR750055.1,
                     INSD:EG528533.1,INSD:BP581315.1,INSD:BP856785.1,
                     INSD:T22612.1,INSD:AV551266.1,INSD:BP570007.1,
                     INSD:DR377801.1,INSD:BP566856.1,INSD:BX839797.1,
                     INSD:BP581392.1,INSD:DR750054.1,INSD:BP868377.1,
                     INSD:EL286142.1,INSD:BP797190.1,INSD:BP779221.1,
                     INSD:DR290816.1,INSD:AA395706.1,INSD:DR290817.1,
                     INSD:BP644819.1,INSD:EG528500.1,INSD:EL054377.1,
                     INSD:BP824743.1,INSD:BP669451.1,INSD:AV825882.1,
                     INSD:BP666819.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:AY088183.1,INSD:AY050455.1,INSD:BX817021.1,
                     INSD:BX813873.1,INSD:AY093992.1,INSD:BX815924.1,
                     INSD:U76707.1"
                     /note="NONEXPRESSER OF PR GENES 1 (NPR1); CONTAINS
                     InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), NPR1/NIM1
                     like, C-terminal (InterPro:IPR021094), BTB/POZ fold
                     (InterPro:IPR011333), Ankyrin repeat-containing domain
                     (InterPro:IPR020683), BTB/POZ-like (InterPro:IPR000210),
                     Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis
                     thaliana protein match is: Ankyrin repeat family protein /
                     BTB/POZ domain-containing protein (TAIR:AT4G26120.1); Has
                     5193 Blast hits to 3365 proteins in 257 species: Archae -
                     2; Bacteria - 309; Metazoa - 2278; Fungi - 110; Plants -
                     802; Viruses - 16; Other Eukaryotes - 1676 (source: NCBI
                     BLink)."
                     /codon_start=1
                     /product="regulatory protein (NPR1)"
                     /protein_id="NP_176610.1"
                     /db_xref="Araport:AT1G64280"
                     /db_xref="GeneID:842733"
                     /db_xref="TAIR:AT1G64280"
                     /translation="MDTTIDGFADSYEISSTSFVATDNTDSSIVYLAAEQVLTGPDVS
                     ALQLLSNSFESVFDSPDDFYSDAKLVLSDGREVSFHRCVLSARSSFFKSALAAAKKEK
                     DSNNTAAVKLELKEIAKDYEVGFDSVVTVLAYVYSSRVRPPPKGVSECADENCCHVAC
                     RPAVDFMLEVLYLAFIFKIPELITLYQRHLLDVVDKVVIEDTLVILKLANICGKACMK
                     LLDRCKEIIVKSNVDMVSLEKSLPEELVKEIIDRRKELGLEVPKVKKHVSNVHKALDS
                     DDIELVKLLLKEDHTNLDDACALHFAVAYCNVKTATDLLKLDLADVNHRNPRGYTVLH
                     VAAMRKEPQLILSLLEKGASASEATLEGRTALMIAKQATMAVECNNIPEQCKHSLKGR
                     LCVEILEQEDKREQIPRDVPPSFAVAADELKMTLLDLENRVALAQRLFPTEAQAAMEI
                     AEMKGTCEFIVTSLEPDRLTGTKRTSPGVKIAPFRILEEHQSRLKALSKTVELGKRFF
                     PRCSAVLDQIMNCEDLTQLACGEDDTAEKRLQKKQRYMEIQETLKKAFSEDNLELGNS
                     SLTDSTSSTSKSTGGKRSNRKLSHRRR"
ORIGIN      
        1 cttcctgtta tatcttttta aaaaagatct ctgacaaaga ttcctttcct ggaaatttac
       61 cggttttggt gaaatgtaaa ccgtgggacg aggatgcttc ttcatatctc accaccactc
      121 tcgttgactt gacttggctc tgctcgtcaa tggttatctt cgatctttaa ccaaatccag
      181 ttgataaggt ctcttcgttg attagcagag atctctttaa tttgtgaatt tcaattcatc
      241 ggaacctgtt gatggacacc accattgatg gattcgccga ttcttatgaa atcagcagca
      301 ctagtttcgt cgctaccgat aacaccgact cctctattgt ttatctggcc gccgaacaag
      361 tactcaccgg acctgatgta tctgctctgc aattgctctc caacagcttc gaatccgtct
      421 ttgactcgcc ggatgatttc tacagcgacg ctaagcttgt tctctccgac ggccgggaag
      481 tttctttcca ccggtgcgtt ttgtcagcga gaagctcttt cttcaagagc gctttagccg
      541 ccgctaagaa ggagaaagac tccaacaaca ccgccgccgt gaagctcgag cttaaggaga
      601 ttgccaagga ttacgaagtc ggtttcgatt cggttgtgac tgttttggct tatgtttaca
      661 gcagcagagt gagaccgccg cctaaaggag tttctgaatg cgcagacgag aattgctgcc
      721 acgtggcttg ccggccggcg gtggatttca tgttggaggt tctctatttg gctttcatct
      781 tcaagatccc tgaattaatt actctctatc agaggcactt attggacgtt gtagacaaag
      841 ttgttataga ggacacattg gttatactca agcttgctaa tatatgtggt aaagcttgta
      901 tgaagctatt ggatagatgt aaagagatta ttgtcaagtc taatgtagat atggttagtc
      961 ttgaaaagtc attgccggaa gagcttgtta aagagataat tgatagacgt aaagagcttg
     1021 gtttggaggt acctaaagta aagaaacatg tctcgaatgt acataaggca cttgactcgg
     1081 atgatattga gttagtcaag ttgcttttga aagaggatca caccaatcta gatgatgcgt
     1141 gtgctcttca tttcgctgtt gcatattgca atgtgaagac cgcaacagat cttttaaaac
     1201 ttgatcttgc cgatgtcaac cataggaatc cgaggggata tacggtgctt catgttgctg
     1261 cgatgcggaa ggagccacaa ttgatactat ctctattgga aaaaggtgca agtgcatcag
     1321 aagcaacttt ggaaggtaga accgcactca tgatcgcaaa acaagccact atggcggttg
     1381 aatgtaataa tatcccggag caatgcaagc attctctcaa aggccgacta tgtgtagaaa
     1441 tactagagca agaagacaaa cgagaacaaa ttcctagaga tgttcctccc tcttttgcag
     1501 tggcggccga tgaattgaag atgacgctgc tcgatcttga aaatagagtt gcacttgctc
     1561 aacgtctttt tccaacggaa gcacaagctg caatggagat cgccgaaatg aagggaacat
     1621 gtgagttcat agtgactagc ctcgagcctg accgtctcac tggtacgaag agaacatcac
     1681 cgggtgtaaa gatagcacct ttcagaatcc tagaagagca tcaaagtaga ctaaaagcgc
     1741 tttctaaaac cgtggaactc gggaaacgat tcttcccgcg ctgttcggca gtgctcgacc
     1801 agattatgaa ctgtgaggac ttgactcaac tggcttgcgg agaagacgac actgctgaga
     1861 aacgactaca aaagaagcaa aggtacatgg aaatacaaga gacactaaag aaggccttta
     1921 gtgaggacaa tttggaatta ggaaattcgt ccctgacaga ttcgacttct tccacatcga
     1981 aatcaaccgg tggaaagagg tctaaccgta aactctctca tcgtcgtcgg tgagactctt
     2041 gcctcttagt gtaatttttg ctgtaccata taattctgtt ttcatgatga ctgtaactgt
     2101 ttatgtctat cgttggcgtc atatagtttc gctcttcgtt ttgcatcctg tgtattattg
     2161 ctgcaggtgt gcttcaaaca aatgttgtaa caatttgaac caatggtata cagatttgta
     2221 atatatattt atgtacatca acaataaccc atgatggtgt tacagagttg ctagaatcaa
     2281 agtgtgaaat aatgtcaaat tgttcatctg ttggatattt tccaccaaga accaaaagaa
     2341 tattcaagtt ccctgaactt ctggcaacat tcatgttata tgtatcttcc taattcttcc
     2401 tttaaccttt tgtaactcga attacacagc aagttagttt caggtctaga gataagagaa
     2461 cactgagtgg gcgtgtaagg tgcattctcc tagtcagctc cattgcatcc aacatttgtg
     2521 aatgacacaa gttaacaatc ctttgcacca tttctgggtg catacatgga aacttcttcg
     2581 attgaaactt cccacatgtg caggtgcgtt cgct
//
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