LOCUS NM_100365 1626 bp mRNA linear PLN 20-OCT-2022
DEFINITION Arabidopsis thaliana protein arginine methyltransferase 10
(PRMT10), mRNA.
ACCESSION NM_100365
VERSION NM_100365.4
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 1626)
AUTHORS Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
Fraser,C.M., Venter,J.C. and Davis,R.W.
TITLE Sequence and analysis of chromosome 1 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 816-820 (2000)
PUBMED 11130712
REFERENCE 2 (bases 1 to 1626)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1626)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (bases 1 to 1626)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 5 (bases 1 to 1626)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
This record is derived from an annotated genomic sequence
(NC_003070).
On Sep 12, 2016 this sequence version replaced NM_100365.3.
FEATURES Location/Qualifiers
source 1..1626
/organism="Arabidopsis thaliana"
/mol_type="mRNA"
/db_xref="taxon:3702"
/chromosome="1"
/ecotype="Columbia"
gene 1..1626
/gene="PRMT10"
/locus_tag="AT1G04870"
/gene_synonym="ATPRMT10; F13M7.14; F13M7_14; protein
arginine methyltransferase 10"
/note="Encodes a type I protein arginine methyltransferase
based on the At1g04870.2 gene model. PRMT10 can catalyze
the asymmetric dimethylation of arginine 3 on histone 4
and can also methylate myelin basic protein in vitro.
Mutants lacking PRMT10 flower late due to defects in the
autonomous pathway and they have elevated levels of FLC
transcripts."
/db_xref="Araport:AT1G04870"
/db_xref="GeneID:839393"
/db_xref="TAIR:AT1G04870"
CDS 224..1375
/gene="PRMT10"
/locus_tag="AT1G04870"
/gene_synonym="ATPRMT10; F13M7.14; F13M7_14; protein
arginine methyltransferase 10"
/inference="Similar to RNA sequence,
EST:INSD:EG485439.1,INSD:EL026460.1,INSD:BP593884.1,
INSD:BP661188.1,INSD:EL207399.1,INSD:AV550464.1,
INSD:DR365690.1,INSD:ES185905.1,INSD:AV803917.1,
INSD:BP838109.1,INSD:BP846898.1,INSD:ES031848.1,
INSD:BP860546.1,INSD:EL124065.1,INSD:BP828887.1,
INSD:EL083567.1,INSD:ES009835.1,INSD:EL222843.1,
INSD:ES160956.1,INSD:AV825296.1,INSD:BP595183.1,
INSD:DR365689.1,INSD:DR365688.1,INSD:BP664979.1,
INSD:ES177669.1,INSD:DR365691.1,INSD:Z29205.1,
INSD:EL979542.1,INSD:AV827995.1,INSD:AI996834.1,
INSD:AV811961.1,INSD:AV788102.1,INSD:BP657358.1,
INSD:BP841904.1,INSD:Z30908.1,INSD:AV790895.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX815651.1,INSD:AF436837.1,INSD:BX813357.1,
INSD:AY132011.1"
/note="protein arginine methyltransferase 10 (PRMT10);
FUNCTIONS IN: histone-arginine N-methyltransferase
activity, methyltransferase activity, protein-arginine
omega-N asymmetric methyltransferase activity, [myelin
basic protein]-arginine N-methyltransferase activity,
protein-arginine omega-N monomethyltransferase activity;
INVOLVED IN: vegetative to reproductive phase transition
of meristem, peptidyl-arginine methylation, to
asymmetrical-dimethyl arginine; LOCATED IN: cytoplasm;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: Skb1
methyltransferase (InterPro:IPR007857); BEST Arabidopsis
thaliana protein match is: protein arginine
methyltransferase 6 (TAIR:AT3G20020.1); Has 3346 Blast
hits to 3335 proteins in 890 species: Archae - 50;
Bacteria - 1167; Metazoa - 1181; Fungi - 251; Plants -
354; Viruses - 1; Other Eukaryotes - 342 (source: NCBI
BLink)."
/codon_start=1
/product="protein arginine methyltransferase 10"
/protein_id="NP_563720.1"
/db_xref="Araport:AT1G04870"
/db_xref="GeneID:839393"
/db_xref="TAIR:AT1G04870"
/translation="MRSSQNGGAMGGRAAGTGGGGPSAPVDKEVDYAQYFCTYSFLYH
QKDMLSDRVRMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT
KMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMGYFLLRESMFDSVIS
ARDRWLKPTGVMYPSHARMWLAPIKSNIADRKRNDFDGAMADWHNFSDEIKSYYGVDM
GVLTKPFAEEQEKYYIQTAMWNDLNPQQIIGTPTIVKEMDCLTASVSEIEEVRSNVTS
VINMEHTRLCGFGGWFDVQFSGRKEDPAQQEIELTTAPSEQHCTHWGQQVFIMSNPIN
VEEGDNLNLGLLMSRSKENHRLMEIELNCEIKEASGNPKESFKKTYFIE"
ORIGIN
1 cgaagaagta atccctgtaa tatgattttg aaagcggagg agggagactt aaagactttg
61 attgattgat ttataaaagg aaccctaagt ttccgaactt tgtccgtcgc cgtctgaaaa
121 ctctgtagct ctctcacttc agctttccaa ttaaagggaa caaagctttg atttttgccg
181 cagtcagaag cattactttg caagaacaag tgtgtaaaca aagatgagga gctcccaaaa
241 cggcggcgca atgggtggac gagctgccgg aaccggcgga ggaggaccgt cggctccagt
301 tgacaaagaa gttgactacg ctcagtactt ctgtacttac tccttcctat accaccagaa
361 ggatatgctc tccgaccgtg tccgtatgga tgcttacttc aacgccgtct tccagaacaa
421 acatcacttt gagggcaaga ctgttttaga cgtgggcacc gggagtggaa ttcttgcaat
481 ttggtcagct caagctggtg ccaggaaggt ttatgccgtt gaagctacta agatggctga
541 tcatgctcgt gcccttgtca aagccaataa ccttgaccat attgtagaag tcattgaagg
601 atctgtcgag gatatttcat tgcctgagaa agttgatgta attatctcgg agtggatggg
661 atacttcctt ctgcgggagt ccatgtttga ttctgtgatt agtgctcgtg accgatggtt
721 aaagccaaca ggtgtcatgt accctagtca tgctcgcatg tggcttgcac ccatcaagtc
781 caatatagca gatcggaaga ggaatgattt cgatggggca atggcagact ggcataactt
841 ttcggatgag atcaaaagtt actatggggt tgatatggga gttttaacaa aaccttttgc
901 tgaagagcaa gaaaagtatt acatacagac tgctatgtgg aatgacttga atccacaaca
961 aatcataggc actcccacaa ttgtcaagga gatggattgt ttgacagcat ctgtcagtga
1021 aatcgaggaa gtcagatcaa atgtaacgtc agttatcaat atggagcata caaggctatg
1081 tggttttggt ggatggttcg atgttcagtt ctcggggaga aaagaagacc ccgcacagca
1141 agaaatcgag ttgaccacag ctccaagtga gcagcactgc acgcactggg gacaacaggt
1201 tttcattatg tcgaatccta taaatgttga ggaaggtgat aatctgaatc ttggtttgtt
1261 aatgagccgg tccaaggaaa atcaccgact aatggagatt gagcttaact gtgaaataaa
1321 agaagcatct ggtaacccca aagaatcttt caagaagact tacttcatag agtgattgat
1381 tgattataga gaagctttcc ttggggcttg ctggttcttg tatcccatgt atgaacccca
1441 aatgtaatgt tttattgctt cttgcctttt ttttctatgt aaacgagatt gttataccaa
1501 ttttcaatag atttttatat gggtgatata atttattatt tttggtattt gattaaacat
1561 ccaaaaattt cttcggtatt aattttgaag agattttttt tctgtgaaga ttgtttaact
1621 tttttg
//