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Arabidopsis thaliana protein arginine methyltransferase 10 (PRMT10), mRNA

NCBI Reference Sequence: NM_100365.4

FASTA Graphics 

LOCUS       NM_100365               1626 bp    mRNA    linear   PLN 20-OCT-2022
DEFINITION  Arabidopsis thaliana protein arginine methyltransferase 10
            (PRMT10), mRNA.
ACCESSION   NM_100365
VERSION     NM_100365.4
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
            White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
            Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
            Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
            Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
            Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
            Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
            Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
            Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
            Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
            Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
            Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
            Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
            Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
            Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
            Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
            Fraser,C.M., Venter,J.C. and Davis,R.W.
  TITLE     Sequence and analysis of chromosome 1 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 816-820 (2000)
   PUBMED   11130712
REFERENCE   2  (bases 1 to 1626)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1626)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (bases 1 to 1626)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   5  (bases 1 to 1626)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            This record is derived from an annotated genomic sequence
            (NC_003070).
            
            On Sep 12, 2016 this sequence version replaced NM_100365.3.
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /ecotype="Columbia"
     gene            1..1626
                     /gene="PRMT10"
                     /locus_tag="AT1G04870"
                     /gene_synonym="ATPRMT10; F13M7.14; F13M7_14; protein
                     arginine methyltransferase 10"
                     /note="Encodes a type I protein arginine methyltransferase
                     based on the At1g04870.2 gene model. PRMT10 can catalyze
                     the asymmetric dimethylation of arginine 3 on histone 4
                     and can also methylate myelin basic protein in vitro.
                     Mutants lacking PRMT10 flower late due to defects in the
                     autonomous pathway and they have elevated levels of FLC
                     transcripts."
                     /db_xref="Araport:AT1G04870"
                     /db_xref="GeneID:839393"
                     /db_xref="TAIR:AT1G04870"
     CDS             224..1375
                     /gene="PRMT10"
                     /locus_tag="AT1G04870"
                     /gene_synonym="ATPRMT10; F13M7.14; F13M7_14; protein
                     arginine methyltransferase 10"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EG485439.1,INSD:EL026460.1,INSD:BP593884.1,
                     INSD:BP661188.1,INSD:EL207399.1,INSD:AV550464.1,
                     INSD:DR365690.1,INSD:ES185905.1,INSD:AV803917.1,
                     INSD:BP838109.1,INSD:BP846898.1,INSD:ES031848.1,
                     INSD:BP860546.1,INSD:EL124065.1,INSD:BP828887.1,
                     INSD:EL083567.1,INSD:ES009835.1,INSD:EL222843.1,
                     INSD:ES160956.1,INSD:AV825296.1,INSD:BP595183.1,
                     INSD:DR365689.1,INSD:DR365688.1,INSD:BP664979.1,
                     INSD:ES177669.1,INSD:DR365691.1,INSD:Z29205.1,
                     INSD:EL979542.1,INSD:AV827995.1,INSD:AI996834.1,
                     INSD:AV811961.1,INSD:AV788102.1,INSD:BP657358.1,
                     INSD:BP841904.1,INSD:Z30908.1,INSD:AV790895.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:BX815651.1,INSD:AF436837.1,INSD:BX813357.1,
                     INSD:AY132011.1"
                     /note="protein arginine methyltransferase 10 (PRMT10);
                     FUNCTIONS IN: histone-arginine N-methyltransferase
                     activity, methyltransferase activity, protein-arginine
                     omega-N asymmetric methyltransferase activity, [myelin
                     basic protein]-arginine N-methyltransferase activity,
                     protein-arginine omega-N monomethyltransferase activity;
                     INVOLVED IN: vegetative to reproductive phase transition
                     of meristem, peptidyl-arginine methylation, to
                     asymmetrical-dimethyl arginine; LOCATED IN: cytoplasm;
                     EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14
                     growth stages; CONTAINS InterPro DOMAIN/s: Skb1
                     methyltransferase (InterPro:IPR007857); BEST Arabidopsis
                     thaliana protein match is: protein arginine
                     methyltransferase 6 (TAIR:AT3G20020.1); Has 3346 Blast
                     hits to 3335 proteins in 890 species: Archae - 50;
                     Bacteria - 1167; Metazoa - 1181; Fungi - 251; Plants -
                     354; Viruses - 1; Other Eukaryotes - 342 (source: NCBI
                     BLink)."
                     /codon_start=1
                     /product="protein arginine methyltransferase 10"
                     /protein_id="NP_563720.1"
                     /db_xref="Araport:AT1G04870"
                     /db_xref="GeneID:839393"
                     /db_xref="TAIR:AT1G04870"
                     /translation="MRSSQNGGAMGGRAAGTGGGGPSAPVDKEVDYAQYFCTYSFLYH
                     QKDMLSDRVRMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT
                     KMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMGYFLLRESMFDSVIS
                     ARDRWLKPTGVMYPSHARMWLAPIKSNIADRKRNDFDGAMADWHNFSDEIKSYYGVDM
                     GVLTKPFAEEQEKYYIQTAMWNDLNPQQIIGTPTIVKEMDCLTASVSEIEEVRSNVTS
                     VINMEHTRLCGFGGWFDVQFSGRKEDPAQQEIELTTAPSEQHCTHWGQQVFIMSNPIN
                     VEEGDNLNLGLLMSRSKENHRLMEIELNCEIKEASGNPKESFKKTYFIE"
ORIGIN      
        1 cgaagaagta atccctgtaa tatgattttg aaagcggagg agggagactt aaagactttg
       61 attgattgat ttataaaagg aaccctaagt ttccgaactt tgtccgtcgc cgtctgaaaa
      121 ctctgtagct ctctcacttc agctttccaa ttaaagggaa caaagctttg atttttgccg
      181 cagtcagaag cattactttg caagaacaag tgtgtaaaca aagatgagga gctcccaaaa
      241 cggcggcgca atgggtggac gagctgccgg aaccggcgga ggaggaccgt cggctccagt
      301 tgacaaagaa gttgactacg ctcagtactt ctgtacttac tccttcctat accaccagaa
      361 ggatatgctc tccgaccgtg tccgtatgga tgcttacttc aacgccgtct tccagaacaa
      421 acatcacttt gagggcaaga ctgttttaga cgtgggcacc gggagtggaa ttcttgcaat
      481 ttggtcagct caagctggtg ccaggaaggt ttatgccgtt gaagctacta agatggctga
      541 tcatgctcgt gcccttgtca aagccaataa ccttgaccat attgtagaag tcattgaagg
      601 atctgtcgag gatatttcat tgcctgagaa agttgatgta attatctcgg agtggatggg
      661 atacttcctt ctgcgggagt ccatgtttga ttctgtgatt agtgctcgtg accgatggtt
      721 aaagccaaca ggtgtcatgt accctagtca tgctcgcatg tggcttgcac ccatcaagtc
      781 caatatagca gatcggaaga ggaatgattt cgatggggca atggcagact ggcataactt
      841 ttcggatgag atcaaaagtt actatggggt tgatatggga gttttaacaa aaccttttgc
      901 tgaagagcaa gaaaagtatt acatacagac tgctatgtgg aatgacttga atccacaaca
      961 aatcataggc actcccacaa ttgtcaagga gatggattgt ttgacagcat ctgtcagtga
     1021 aatcgaggaa gtcagatcaa atgtaacgtc agttatcaat atggagcata caaggctatg
     1081 tggttttggt ggatggttcg atgttcagtt ctcggggaga aaagaagacc ccgcacagca
     1141 agaaatcgag ttgaccacag ctccaagtga gcagcactgc acgcactggg gacaacaggt
     1201 tttcattatg tcgaatccta taaatgttga ggaaggtgat aatctgaatc ttggtttgtt
     1261 aatgagccgg tccaaggaaa atcaccgact aatggagatt gagcttaact gtgaaataaa
     1321 agaagcatct ggtaacccca aagaatcttt caagaagact tacttcatag agtgattgat
     1381 tgattataga gaagctttcc ttggggcttg ctggttcttg tatcccatgt atgaacccca
     1441 aatgtaatgt tttattgctt cttgcctttt ttttctatgt aaacgagatt gttataccaa
     1501 ttttcaatag atttttatat gggtgatata atttattatt tttggtattt gattaaacat
     1561 ccaaaaattt cttcggtatt aattttgaag agattttttt tctgtgaaga ttgtttaact
     1621 tttttg
//
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