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NCBI Reference Sequence: NM_073792.6
FASTA Graphics
LOCUS NM_073792 3553 bp mRNA linear INV 04-DEC-2024 DEFINITION Caenorhabditis elegans Cohesin subunit scc-3 (scc-3), partial mRNA. ACCESSION NM_073792 VERSION NM_073792.6 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 3553) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 3553) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (04-DEC-2024) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3553) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (17-OCT-2024) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 3553) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003283). On Feb 2, 2021 this sequence version replaced NM_073792.5. COMPLETENESS: incomplete on the 5' end. FEATURES Location/Qualifiers source 1..3553 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="V" gene <1..3553 /gene="scc-3" /locus_tag="CELE_F18E2.3" /db_xref="GeneID:179749" /db_xref="WormBase:WBGene00004738" CDS 1..3291 /gene="scc-3" /locus_tag="CELE_F18E2.3" /standard_name="F18E2.3" /note="Confirmed by transcript evidence" /codon_start=1 /product="Cohesin subunit scc-3" /protein_id="NP_506193.1" /db_xref="GeneID:179749" /db_xref="WormBase:WBGene00004738" /translation="MSETPTDQSPQRMSTRNQARVNYTDMAAGNNSVEKEPVFRSPTA STRGRKKRAANVDVADLSASFGNLNNFSTPPKRGRPRGGGLGSARGGRAPMVRRTTTE ESAEVDDRELVAAVKSGKKITEAVDRWIGRYNEKFLVAIAEMHQFFFAICGCKGIVTP QMSATLTYKDIICRMTEDFEEDSADYPLVHGGSLKKVRANLHNFIHTLIIRTKASMLF DSNLMDGFVQLLTGMADSQVRAFRHTATFCAMKITSALVDVTIELTQSKEKTSKQIEA EKAKLKNNSAGNEKYEALVAQRTQTEERAEEIRQIIGYLFRSVFVHRYRDVVPDIRCI CIQELGHWMDVYPEHFVEDSYLKYIGWSMFDKVGDVRQRCIRALIPLFEKTLILDKLE LFVNKFKDRLVSMLLDKDLETSIETVHLMRVLYTVFPTLLTIKDVVPIYELIYASNRP LAVAAGMFLNTKVFRSAEKPGKAPTAANIPLVKDLTTFFIEGDLHQHATYLVDALFES NPIVKDWATMGELLINDQYQLDSNFETKLIEILTCSVVQSATGEPPVGRHIVKKGAPS AKESRDLVEDRQRLTETLIPLIPRLITKFSSDNEKIINLVNIPLHFQLETYLSARMQT HLMELMEGLDSLIEKHLDEELLKAVAELYYHLTTNSSISALVEGHKMKLLDGVAAFIR KSMQQFDDDQMGEEEEALFVSYIKRMAAFAGFMDLRHWDLWDILLKVVSNYTREDTQR DVRERSMQMLFMQLCFDSMNIKKEGETPKADQVRKLKKRRDQLIRIVTETLNEEACGV EQAYLVICDLMILFGSQLAEESKALEPLIWRPDAMVLGNLKIFLDVNVFDVSNLDDMD QQEKIEVMHKMRQHVAQYAKLIIHGAMPVAEASHLIKRYQSHFQDFGDIFKNLLSKCR EISFVETGVMICETLKTLYSQLDEDQGTDPLSESFNSIRDLAKRLGPAFGVDYAKNRF AISSLHKKAIDFAFEEYDKENHQMPKNIFFLEIAIEFSGKLLAQDKMAVVRYLNKIYT NRVGTSTVVWEPYRLYLGSLSDRNDDDNMSVRSGMTVTSNATMRSTASSTRGRGRGRG RSRIADDF" ORIGIN 1 atgtcggaga cacctacaga tcagtcccct cagcggatgt ccacgagaaa ccaagcccgt 61 gtcaactaca cggatatggc agctggaaac aattcagtag aaaaggagcc tgtatttcgt 121 tcaccaacag ctagcactcg aggacgaaaa aaacgagccg ctaatgtcga tgttgcggat 181 ctttcggcca gctttggcaa tctgaataac ttcagcacgc ctccgaaacg cggccgtcca 241 cgaggtgggg gtttaggaag tgcgcgtgga ggaagagcac caatggttcg acgaacgaca 301 acagaggaat ctgctgaagt agatgatcgc gagcttgtag ctgccgttaa atcaggaaag 361 aaaatcacgg aagcggtaga cagatggatt ggccgttaca acgaaaaatt tctggttgca 421 attgccgaga tgcatcaatt tttcttcgca atctgtggat gcaaaggaat tgtcacacca 481 caaatgtcag caactcttac ctacaaagac atcatttgtc ggatgacaga agattttgaa 541 gaggattccg ctgactatcc attagttcat ggaggaagtc tgaaaaaagt tcgcgcaaat 601 cttcacaatt tcattcatac tctgatcatc agaaccaaag cgtcaatgct tttcgatagc 661 aatcttatgg atggttttgt gcagttgctg actggaatgg ctgacagtca agttcgtgca 721 ttccggcaca cagcgacttt ttgcgctatg aagatcacat cagcgcttgt tgacgtcacc 781 attgaactta cacagtcgaa agaaaaaact tcaaagcaaa ttgaagcaga gaaggccaag 841 ctgaagaaca attcggctgg aaatgaaaaa tacgaggcac ttgttgcaca aaggactcaa 901 acagaagaac gcgctgaaga gattcgtcaa atcatcggat acttattcag aagtgtcttt 961 gttcatcgct atcgtgatgt ggtaccagac attcgatgta tatgtattca agaactcggt 1021 cactggatgg atgtttatcc agagcatttt gttgaggatt catatctcaa gtatattggc 1081 tggtcaatgt ttgataaagt tggtgacgtg agacaaagat gtattcgcgc tttgattcca 1141 cttttcgaga agacgttgat tctggataaa ctagaattgt tcgtcaataa attcaaagat 1201 cgcctcgttt caatgctact tgataaggat ttagagacaa gtattgaaac tgttcacttg 1261 atgcgtgttc tctatacagt tttccctact cttcttacaa tcaaagacgt cgttccgatc 1321 tacgagctga tctatgcttc aaatcgtcca ttagctgttg ccgctggaat gttcttgaat 1381 acaaaagttt ttcgaagtgc agagaaacca ggaaaagcgc caactgctgc aaacattcct 1441 ttggtgaaag atctcacgac gttcttcatc gaaggagatc ttcatcaaca tgcaacgtat 1501 ttggttgacg cactttttga aagcaatcca attgtgaagg attgggcgac aatgggagaa 1561 ttattgatta acgatcagta tcaattggac tccaacttcg agacaaaatt aatcgagatc 1621 cttacttgct ctgtagtgca atctgcaact ggagagcccc ctgtaggaag acatattgtc 1681 aagaaaggtg ctccatctgc caaggaatcc cgggatcttg tagaagacag acaaagactt 1741 accgaaaccc tcatccctct cattcctcgc cttatcacaa agttcagctc ggacaatgag 1801 aaaattatca atttggtcaa cattccactg cactttcagt tagaaacata cttatcagct 1861 cgaatgcaaa cgcatctcat ggaactcatg gaaggtctag actcattgat tgaaaagcat 1921 ctcgatgaag aattgctcaa agctgtagca gaattgtact accacttgac aaccaactcc 1981 tccatttctg ctctcgtcga aggccacaaa atgaaacttt tggacggagt tgctgctttc 2041 attcggaaat ctatgcaaca atttgatgat gatcagatgg gggaagaaga ggaagcactt 2101 ttcgtatcct acataaaacg aatggctgct ttcgctggat tcatggatct tcgccattgg 2161 gatctttggg acattcttct gaaagttgtt tcaaactata cacgcgaaga cacacaacga 2221 gacgttcgag aaagatcaat gcaaatgtta ttcatgcaac tttgctttga ttcaatgaat 2281 atcaagaaag aaggagaaac tccgaaagca gatcaagtta gaaaactgaa gaaacgtaga 2341 gatcagttaa ttcgaattgt aaccgaaaca ttgaacgaag aagcatgcgg agtcgaacaa 2401 gcttatttgg tgatctgtga cctgatgatc cttttcggaa gtcaacttgc agaggagtcc 2461 aaagctctgg aaccactgat ttggcgcccc gatgcaatgg ttcttggaaa tctcaaaatc 2521 tttctggacg taaatgtatt tgatgtaagc aacttggatg atatggatca acaagagaag 2581 attgaagtaa tgcacaaaat gcggcaacac gttgcacaat acgctaagct tatcattcac 2641 ggagccatgc cagtcgcaga agcatctcat ctcataaaac gctatcagtc tcacttccaa 2701 gacttcggag acattttcaa aaatctttta tcaaagtgcc gtgaaatttc atttgtcgaa 2761 actggcgtca tgatttgtga aactcttaaa accctttatt cacaattgga cgaagatcaa 2821 ggaacggatc cactgtcaga gtcattcaat tctattcgtg atcttgcaaa acgattagga 2881 cctgctttcg gtgttgatta tgctaagaat cggtttgcta tctcgtcatt gcacaaaaaa 2941 gccatcgatt ttgcattcga agagtacgat aaagaaaatc atcagatgcc gaaaaacatt 3001 ttcttcttgg aaattgctat cgaatttagc gggaagttat tggcacagga caagatggct 3061 gtcgttcgtt acttgaacaa aatttacaca aaccgcgttg gaacatcaac agtcgtttgg 3121 gaaccatatc gattatacct cggatcactc tcggatcgta acgatgatga caacatgtct 3181 gtgcgcagtg gaatgaccgt tacatccaat gcaactatga gaagtactgc ttcgtcaaca 3241 cgtggaagag gtcgtggaag aggtcgttcc agaattgccg atgattttta atagaaagta 3301 acatcttcaa aactgtaata tttgtttttt taaaattcca tccatcatct cccctcttct 3361 gatcttctcc ttaatttatg ttttgaacac tgaatgttaa acaatgcgat ctctttatat 3421 ttccctttat ctgttatccc tcgaaaatgt tatgctcgcc tccccgtccc caaattccgt 3481 tctcatcatg aggtacttct ttttgttctc aaaaatatct gtgaatgatt tcaaaaataa 3541 aagaagtatt ctt //
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